RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 MAP3K19Q56UN5 1328 aa23.36■■□□□ 1.33
RABGGTA-203ENST00000543002 LTN1O94822 1766 aa23.36■■□□□ 1.33
RABGGTA-203ENST00000543002 AXIN2Q9Y2T1 843 aa23.35■■□□□ 1.33
RABGGTA-203ENST00000543002 RRS1Q15050 365 aaKnown RBP23.34■■□□□ 1.33
RABGGTA-203ENST00000543002 VPS72Q15906 364 aa23.33■■□□□ 1.33
RABGGTA-203ENST00000543002 CC2D1BQ5T0F9 858 aaKnown RBP23.33■■□□□ 1.33
RABGGTA-203ENST00000543002 EVA1CP58658 441 aa23.33■■□□□ 1.32
RABGGTA-203ENST00000543002 IP6K1Q92551 441 aa23.33■■□□□ 1.32
RABGGTA-203ENST00000543002 STRN4Q9NRL3 753 aa23.33■■□□□ 1.32
RABGGTA-203ENST00000543002 COL5A2P05997 1499 aaPredicted RBP23.32■■□□□ 1.32
RABGGTA-203ENST00000543002 TNNT2P45379 298 aaPredicted RBP23.32■■□□□ 1.32
RABGGTA-203ENST00000543002 AMPHP49418 695 aa23.32■■□□□ 1.32
RABGGTA-203ENST00000543002 RTL1A6NKG5 1358 aa23.31■■□□□ 1.32
RABGGTA-203ENST00000543002 KIF24Q5T7B8 1368 aa23.31■■□□□ 1.32
RABGGTA-203ENST00000543002 HOXC9P31274 260 aa23.31■■□□□ 1.32
RABGGTA-203ENST00000543002 BLMP54132 1417 aaPredicted RBP23.3■■□□□ 1.32
RABGGTA-203ENST00000543002 RXRBP28702 533 aa23.3■■□□□ 1.32
RABGGTA-203ENST00000543002 RBM6P78332 1123 aaKnown RBP23.3■■□□□ 1.32
RABGGTA-203ENST00000543002 GJD4Q96KN9 370 aaPredicted RBP23.3■■□□□ 1.32
RABGGTA-203ENST00000543002 POLKQ9UBT6 870 aa23.3■■□□□ 1.32
RABGGTA-203ENST00000543002 CCDC9Q9Y3X0 531 aaKnown RBP23.29■■□□□ 1.32
RABGGTA-203ENST00000543002 EMILIN1Q9Y6C2 1016 aa23.29■■□□□ 1.32
RABGGTA-203ENST00000543002 RGPD5Q99666 1765 aa23.28■■□□□ 1.32
RABGGTA-203ENST00000543002 LARP1Q6PKG0 1096 aaKnown RBP23.28■■□□□ 1.32
RABGGTA-203ENST00000543002 FLT4P35916 1363 aa23.27■■□□□ 1.32
RABGGTA-203ENST00000543002 SPATA31A5Q5VU36 1347 aa23.27■■□□□ 1.32
RABGGTA-203ENST00000543002 SPATA31A7Q8IWB4 1347 aa23.27■■□□□ 1.32
RABGGTA-203ENST00000543002 WDR17Q8IZU2 1322 aa23.27■■□□□ 1.32
RABGGTA-203ENST00000543002 CNGB1Q14028 1251 aaPredicted RBP23.27■■□□□ 1.32
RABGGTA-203ENST00000543002 MAP2P11137 1827 aaKnown RBP23.27■■□□□ 1.32
RABGGTA-203ENST00000543002 ERBB3P21860 1342 aa23.26■■□□□ 1.31
RABGGTA-203ENST00000543002 PEAK1Q9H792 1746 aa23.26■■□□□ 1.31
RABGGTA-203ENST00000543002 GLI3P10071 1580 aa23.25■■□□□ 1.31
RABGGTA-203ENST00000543002 ANKRD24Q8TF21 1146 aa23.25■■□□□ 1.31
RABGGTA-203ENST00000543002 CRB1P82279 1406 aa23.25■■□□□ 1.31
RABGGTA-203ENST00000543002 SPATA31A1Q5TZJ5 1347 aa23.24■■□□□ 1.31
RABGGTA-203ENST00000543002 PPM1GO15355 546 aaPredicted RBP23.24■■□□□ 1.31
RABGGTA-203ENST00000543002 CSB-PGBD3P0DP91 1061 aa23.24■■□□□ 1.31
RABGGTA-203ENST00000543002 SMG6Q86US8 1419 aaKnown RBP23.24■■□□□ 1.31
RABGGTA-203ENST00000543002 INSRP06213 1382 aa23.24■■□□□ 1.31
RABGGTA-203ENST00000543002 HSP90AB2PQ58FF8 381 aa23.23■■□□□ 1.31
RABGGTA-203ENST00000543002 TOM1L2Q6ZVM7 507 aa23.23■■□□□ 1.31
RABGGTA-203ENST00000543002 LTV1Q96GA3 475 aaPredicted RBP23.21■■□□□ 1.31
RABGGTA-203ENST00000543002 CDK12Q9NYV4 1490 aaPredicted RBP23.21■■□□□ 1.31
RABGGTA-203ENST00000543002 CARD10Q9BWT7 1032 aa23.2■■□□□ 1.3
RABGGTA-203ENST00000543002 ONECUT3O60422 494 aaPredicted RBP23.19■■□□□ 1.3
RABGGTA-203ENST00000543002 TCP11L2Q8N4U5 519 aa23.19■■□□□ 1.3
RABGGTA-203ENST00000543002 USP35Q9P2H5 1018 aa23.19■■□□□ 1.3
RABGGTA-203ENST00000543002 THRAP3Q9Y2W1 955 aaKnown RBP23.19■■□□□ 1.3
RABGGTA-203ENST00000543002 NLRP2Q9NX02 1062 aa23.18■■□□□ 1.3
RABGGTA-203ENST00000543002 PARD3Q8TEW0 1356 aa23.17■■□□□ 1.3
RABGGTA-203ENST00000543002 MTHFSP49914 203 aa23.17■■□□□ 1.3
RABGGTA-203ENST00000543002 FAM98CQ17RN3 349 aaKnown RBP23.17■■□□□ 1.3
RABGGTA-203ENST00000543002 BARGINQ6ZT62 677 aa23.17■■□□□ 1.3
RABGGTA-203ENST00000543002 ILDR2Q71H61 639 aa23.17■■□□□ 1.3
RABGGTA-203ENST00000543002 FAM208AQ9UK61 1670 aaKnown RBP23.16■■□□□ 1.3
RABGGTA-203ENST00000543002 RGS12O14924 1447 aa23.16■■□□□ 1.3
RABGGTA-203ENST00000543002 PPP2R1AP30153 589 aa23.14■■□□□ 1.3
RABGGTA-203ENST00000543002 RALBP1Q15311 655 aa23.13■■□□□ 1.29
RABGGTA-203ENST00000543002 EIF4A2Q14240 407 aaKnown RBP23.12■■□□□ 1.29
RABGGTA-203ENST00000543002 NBPF6Q5VWK0 638 aa23.12■■□□□ 1.29
RABGGTA-203ENST00000543002 SEPT12Q8IYM1 358 aa23.12■■□□□ 1.29
RABGGTA-203ENST00000543002 NBPF4Q96M43 638 aa23.12■■□□□ 1.29
RABGGTA-203ENST00000543002 THSD7AQ9UPZ6 1657 aa23.11■■□□□ 1.29
RABGGTA-203ENST00000543002 A0A0G2JS52 829 aa23.1■■□□□ 1.29
RABGGTA-203ENST00000543002 MYT1Q01538 1121 aa23.1■■□□□ 1.29
RABGGTA-203ENST00000543002 CDCA7Q9BWT1 371 aaPredicted RBP23.09■■□□□ 1.29
RABGGTA-203ENST00000543002 RGPD2P0DJD1 1756 aa23.09■■□□□ 1.29
RABGGTA-203ENST00000543002 DISP2A7MBM2 1401 aa23.08■■□□□ 1.29
RABGGTA-203ENST00000543002 EYA1Q99502 592 aa23.08■■□□□ 1.28
RABGGTA-203ENST00000543002 IL13P35225 146 aa23.07■■□□□ 1.28
RABGGTA-203ENST00000543002 USHBP1Q8N6Y0 703 aa23.07■■□□□ 1.28
RABGGTA-203ENST00000543002 PRKRIP1Q9H875 184 aaPredicted RBP23.07■■□□□ 1.28
RABGGTA-203ENST00000543002 WNK3Q9BYP7 1800 aa23.06■■□□□ 1.28
RABGGTA-203ENST00000543002 NCAPD2Q15021 1401 aa23.06■■□□□ 1.28
RABGGTA-203ENST00000543002 IL2RBP14784 551 aa23.06■■□□□ 1.28
RABGGTA-203ENST00000543002 CFAP53Q96M91 514 aa23.06■■□□□ 1.28
RABGGTA-203ENST00000543002 COL3A1P02461 1466 aaPredicted RBP23.05■■□□□ 1.28
RABGGTA-203ENST00000543002 DIAPH1O60610 1272 aaKnown RBP23.05■■□□□ 1.28
RABGGTA-203ENST00000543002 IGSF1Q8N6C5 1336 aa23.04■■□□□ 1.28
RABGGTA-203ENST00000543002 PARP4Q9UKK3 1724 aaKnown RBP23.04■■□□□ 1.28
RABGGTA-203ENST00000543002 MYBBP1AQ9BQG0 1328 aaKnown RBP23.03■■□□□ 1.28
RABGGTA-203ENST00000543002 KRT27Q7Z3Y8 459 aa23.03■■□□□ 1.28
RABGGTA-203ENST00000543002 BRWD3Q6RI45 1802 aa23.03■■□□□ 1.28
RABGGTA-203ENST00000543002 DDB1Q16531 1140 aa23.02■■□□□ 1.28
RABGGTA-203ENST00000543002 RAPGEF4Q8WZA2 1011 aa23.01■■□□□ 1.27
RABGGTA-203ENST00000543002 EXOC5O00471 708 aa23■■□□□ 1.27
RABGGTA-203ENST00000543002 PDE3BQ13370 1112 aa23■■□□□ 1.27
RABGGTA-203ENST00000543002 LRRC37A3O60309 1634 aa23■■□□□ 1.27
RABGGTA-203ENST00000543002 RGPD1P0DJD0 1748 aa22.99■■□□□ 1.27
RABGGTA-203ENST00000543002 MEGF6O75095 1541 aa22.99■■□□□ 1.27
RABGGTA-203ENST00000543002 TATP17735 454 aaPredicted RBP22.98■■□□□ 1.27
RABGGTA-203ENST00000543002 OVOS2A0A0G2JMS6 1433 aa22.97■■□□□ 1.27
RABGGTA-203ENST00000543002 TNS2Q63HR2 1409 aa22.97■■□□□ 1.27
RABGGTA-203ENST00000543002 ANP32CO43423 234 aa22.97■■□□□ 1.27
RABGGTA-203ENST00000543002 SULT6B1Q6IMI4 303 aa22.96■■□□□ 1.27
RABGGTA-203ENST00000543002 AEBP1Q8IUX7 1158 aa22.95■■□□□ 1.26
RABGGTA-203ENST00000543002 NUDCQ9Y266 331 aa22.95■■□□□ 1.26
RABGGTA-203ENST00000543002 KDRP35968 1356 aa22.95■■□□□ 1.26
RABGGTA-203ENST00000543002 U2SURPO15042 1029 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms