RNA–Protein interactions for RNA: ENST00000542362.1

POLE-218, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 4

Gene POLE, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-218	ENST00000542362	GJD4	Q96KN9	370 aa	Predicted RBP	12.71	□□□□□ -0.37
POLE-218	ENST00000542362	AXIN2	Q9Y2T1	843 aa		12.71	□□□□□ -0.37
POLE-218	ENST00000542362	CCDC9	Q9Y3X0	531 aa	Known RBP	12.71	□□□□□ -0.37
POLE-218	ENST00000542362	NINL	Q9Y2I6	1382 aa		12.7	□□□□□ -0.38
POLE-218	ENST00000542362	PUS7	Q96PZ0	661 aa	Known RBP	12.7	□□□□□ -0.38
POLE-218	ENST00000542362	GGNBP2	Q9H3C7	697 aa		12.7	□□□□□ -0.38
POLE-218	ENST00000542362	VPS72	Q15906	364 aa		12.69	□□□□□ -0.38
POLE-218	ENST00000542362	LARP1	Q6PKG0	1096 aa	Known RBP	12.69	□□□□□ -0.38
POLE-218	ENST00000542362	TERF2IP	Q9NYB0	399 aa		12.69	□□□□□ -0.38
POLE-218	ENST00000542362	KIF7	Q2M1P5	1343 aa		12.68	□□□□□ -0.38
POLE-218	ENST00000542362	FAM98C	Q17RN3	349 aa	Known RBP	12.68	□□□□□ -0.38
POLE-218	ENST00000542362	USP35	Q9P2H5	1018 aa		12.68	□□□□□ -0.38
POLE-218	ENST00000542362	SPATA31A5	Q5VU36	1347 aa		12.67	□□□□□ -0.38
POLE-218	ENST00000542362	SPATA31A7	Q8IWB4	1347 aa		12.67	□□□□□ -0.38
POLE-218	ENST00000542362	FAM182B	Q5T319	152 aa		12.67	□□□□□ -0.38
POLE-218	ENST00000542362	ARHGEF25	Q86VW2	580 aa		12.67	□□□□□ -0.38
POLE-218	ENST00000542362	KAT6B	Q8WYB5	2073 aa		12.66	□□□□□ -0.38
POLE-218	ENST00000542362	FYB1	O15117	783 aa		12.66	□□□□□ -0.38
POLE-218	ENST00000542362	ABCC6	O95255	1503 aa		12.66	□□□□□ -0.38
POLE-218	ENST00000542362	AATK	Q6ZMQ8	1374 aa		12.66	□□□□□ -0.38
POLE-218	ENST00000542362	RGPD1	P0DJD0	1748 aa		12.65	□□□□□ -0.38
POLE-218	ENST00000542362	SPATA31A1	Q5TZJ5	1347 aa		12.65	□□□□□ -0.38
POLE-218	ENST00000542362	VIRMA	Q69YN4	1812 aa	Known RBP	12.65	□□□□□ -0.38
POLE-218	ENST00000542362	RRS1	Q15050	365 aa	Known RBP	12.65	□□□□□ -0.38
POLE-218	ENST00000542362	SEPT12	Q8IYM1	358 aa		12.65	□□□□□ -0.38
POLE-218	ENST00000542362		A0A0G2JS52	829 aa		12.64	□□□□□ -0.39
POLE-218	ENST00000542362	MYT1	Q01538	1121 aa		12.64	□□□□□ -0.39
POLE-218	ENST00000542362	WASHC2A	Q641Q2	1341 aa		12.63	□□□□□ -0.39
POLE-218	ENST00000542362	CRB1	P82279	1406 aa		12.63	□□□□□ -0.39
POLE-218	ENST00000542362	CDCA8	Q53HL2	280 aa		12.63	□□□□□ -0.39
POLE-218	ENST00000542362	PANK3	Q9H999	370 aa		12.63	□□□□□ -0.39
POLE-218	ENST00000542362	CCDC7	Q96M83	1385 aa		12.63	□□□□□ -0.39
POLE-218	ENST00000542362	MAP3K19	Q56UN5	1328 aa		12.62	□□□□□ -0.39
POLE-218	ENST00000542362	EVA1C	P58658	441 aa		12.62	□□□□□ -0.39
POLE-218	ENST00000542362	KCNH5	Q8NCM2	988 aa		12.62	□□□□□ -0.39
POLE-218	ENST00000542362	COG3	Q96JB2	828 aa		12.62	□□□□□ -0.39
POLE-218	ENST00000542362	LTV1	Q96GA3	475 aa	Predicted RBP	12.61	□□□□□ -0.39
POLE-218	ENST00000542362	DOT1L	Q8TEK3	1739 aa		12.61	□□□□□ -0.39
POLE-218	ENST00000542362	EMILIN1	Q9Y6C2	1016 aa		12.6	□□□□□ -0.39
POLE-218	ENST00000542362	DISP2	A7MBM2	1401 aa		12.6	□□□□□ -0.39
POLE-218	ENST00000542362	WDR17	Q8IZU2	1322 aa		12.6	□□□□□ -0.39
POLE-218	ENST00000542362	ONECUT3	O60422	494 aa	Predicted RBP	12.59	□□□□□ -0.39
POLE-218	ENST00000542362	SLC24A1	O60721	1099 aa		12.59	□□□□□ -0.39
POLE-218	ENST00000542362	TNNT2	P45379	298 aa	Predicted RBP	12.59	□□□□□ -0.39
POLE-218	ENST00000542362	CNGB1	Q14028	1251 aa	Predicted RBP	12.59	□□□□□ -0.39
POLE-218	ENST00000542362	TOM1L2	Q6ZVM7	507 aa		12.59	□□□□□ -0.39
POLE-218	ENST00000542362	ERBB3	P21860	1342 aa		12.59	□□□□□ -0.39
POLE-218	ENST00000542362	HOXC9	P31274	260 aa		12.58	□□□□□ -0.4
POLE-218	ENST00000542362	ANKRD24	Q8TF21	1146 aa		12.58	□□□□□ -0.4
POLE-218	ENST00000542362	TOGARAM1	Q9Y4F4	1720 aa		12.58	□□□□□ -0.4
POLE-218	ENST00000542362	BTAF1	O14981	1849 aa		12.58	□□□□□ -0.4
POLE-218	ENST00000542362	ITGB4	P16144	1822 aa		12.58	□□□□□ -0.4
POLE-218	ENST00000542362	RREB1	Q92766	1687 aa		12.57	□□□□□ -0.4
POLE-218	ENST00000542362	NUP188	Q5SRE5	1749 aa		12.57	□□□□□ -0.4
POLE-218	ENST00000542362	PKD1L3	Q7Z443	1732 aa		12.57	□□□□□ -0.4
POLE-218	ENST00000542362	CSB-PGBD3	P0DP91	1061 aa		12.57	□□□□□ -0.4
POLE-218	ENST00000542362	KRT27	Q7Z3Y8	459 aa		12.57	□□□□□ -0.4
POLE-218	ENST00000542362	TCP11L2	Q8N4U5	519 aa		12.57	□□□□□ -0.4
POLE-218	ENST00000542362	USHBP1	Q8N6Y0	703 aa		12.57	□□□□□ -0.4
POLE-218	ENST00000542362	MEGF6	O75095	1541 aa		12.57	□□□□□ -0.4
POLE-218	ENST00000542362	BLM	P54132	1417 aa	Predicted RBP	12.56	□□□□□ -0.4
POLE-218	ENST00000542362	NHS	Q6T4R5	1651 aa		12.56	□□□□□ -0.4
POLE-218	ENST00000542362	AMPH	P49418	695 aa		12.55	□□□□□ -0.4
POLE-218	ENST00000542362	HSP90AB2P	Q58FF8	381 aa		12.55	□□□□□ -0.4
POLE-218	ENST00000542362	IP6K1	Q92551	441 aa		12.55	□□□□□ -0.4
POLE-218	ENST00000542362	CGNL1	Q0VF96	1302 aa		12.55	□□□□□ -0.4
POLE-218	ENST00000542362	BARGIN	Q6ZT62	677 aa		12.54	□□□□□ -0.4
POLE-218	ENST00000542362	NLRP2	Q9NX02	1062 aa		12.54	□□□□□ -0.4
POLE-218	ENST00000542362	RTL1	A6NKG5	1358 aa		12.54	□□□□□ -0.4
POLE-218	ENST00000542362	PPM1G	O15355	546 aa	Predicted RBP	12.53	□□□□□ -0.4
POLE-218	ENST00000542362	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.53	□□□□□ -0.4
POLE-218	ENST00000542362	PTF1A	Q7RTS3	328 aa		12.53	□□□□□ -0.4
POLE-218	ENST00000542362	DEFB132	Q7Z7B7	95 aa		12.53	□□□□□ -0.4
POLE-218	ENST00000542362	TNS2	Q63HR2	1409 aa		12.53	□□□□□ -0.4
POLE-218	ENST00000542362	PER1	O15534	1290 aa	Predicted RBP	12.52	□□□□□ -0.41
POLE-218	ENST00000542362	CC2D1B	Q5T0F9	858 aa	Known RBP	12.52	□□□□□ -0.41
POLE-218	ENST00000542362	CARD10	Q9BWT7	1032 aa		12.52	□□□□□ -0.41
POLE-218	ENST00000542362	FLT4	P35916	1363 aa		12.52	□□□□□ -0.41
POLE-218	ENST00000542362	TUBGCP6	Q96RT7	1819 aa		12.51	□□□□□ -0.41
POLE-218	ENST00000542362	NBPF6	Q5VWK0	638 aa		12.51	□□□□□ -0.41
POLE-218	ENST00000542362	NBPF4	Q96M43	638 aa		12.51	□□□□□ -0.41
POLE-218	ENST00000542362	POLK	Q9UBT6	870 aa		12.51	□□□□□ -0.41
POLE-218	ENST00000542362	SMG6	Q86US8	1419 aa	Known RBP	12.51	□□□□□ -0.41
POLE-218	ENST00000542362	MARCH10	Q8NA82	808 aa	Predicted RBP	12.5	□□□□□ -0.41
POLE-218	ENST00000542362	INSR	P06213	1382 aa		12.5	□□□□□ -0.41
POLE-218	ENST00000542362	RGPD3	A6NKT7	1758 aa	Predicted RBP	12.5	□□□□□ -0.41
POLE-218	ENST00000542362	RGPD4	Q7Z3J3	1758 aa		12.5	□□□□□ -0.41
POLE-218	ENST00000542362	TRIM37	O94972	964 aa		12.49	□□□□□ -0.41
POLE-218	ENST00000542362	THRAP3	Q9Y2W1	955 aa	Known RBP	12.49	□□□□□ -0.41
POLE-218	ENST00000542362	NSD2	O96028	1365 aa		12.48	□□□□□ -0.41
POLE-218	ENST00000542362	DDB1	Q16531	1140 aa		12.48	□□□□□ -0.41
POLE-218	ENST00000542362	MORC1	Q86VD1	984 aa		12.48	□□□□□ -0.41
POLE-218	ENST00000542362	CCDC125	Q86Z20	511 aa		12.48	□□□□□ -0.41
POLE-218	ENST00000542362	KNSTRN	Q9Y448	316 aa		12.48	□□□□□ -0.41
POLE-218	ENST00000542362	COL3A1	P02461	1466 aa	Predicted RBP	12.47	□□□□□ -0.41
POLE-218	ENST00000542362	OVOS2	A0A0G2JMS6	1433 aa		12.47	□□□□□ -0.41
POLE-218	ENST00000542362	NCAPD2	Q15021	1401 aa		12.47	□□□□□ -0.41
POLE-218	ENST00000542362	PDE3B	Q13370	1112 aa		12.47	□□□□□ -0.41
POLE-218	ENST00000542362	LY75	O60449	1722 aa		12.47	□□□□□ -0.41
POLE-218	ENST00000542362	DLG5	Q8TDM6	1919 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms