RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 ADAMTS13Q76LX8 1427 aa16.87■□□□□ 0.29
PRKAB1-206ENST00000541640 SEC24BO95487 1268 aa16.87■□□□□ 0.29
PRKAB1-206ENST00000541640 ITPRIPQ8IWB1 547 aa16.87■□□□□ 0.29
PRKAB1-206ENST00000541640 ADAMTSL3P82987 1691 aa16.87■□□□□ 0.29
PRKAB1-206ENST00000541640 TOPAZ1Q8N9V7 1692 aa16.86■□□□□ 0.29
PRKAB1-206ENST00000541640 HMOX1P09601 288 aa16.86■□□□□ 0.29
PRKAB1-206ENST00000541640 NRKQ7Z2Y5 1582 aa16.86■□□□□ 0.29
PRKAB1-206ENST00000541640 DLG5Q8TDM6 1919 aa16.86■□□□□ 0.29
PRKAB1-206ENST00000541640 TMEM57Q8N5G2 664 aa16.86■□□□□ 0.29
PRKAB1-206ENST00000541640 ZRANB1Q9UGI0 708 aa16.86■□□□□ 0.29
PRKAB1-206ENST00000541640 PRR36Q9H6K5 1346 aa16.85■□□□□ 0.29
PRKAB1-206ENST00000541640 NCKAP5LQ9HCH0 1330 aa16.85■□□□□ 0.29
PRKAB1-206ENST00000541640 ROBO2Q9HCK4 1378 aa16.85■□□□□ 0.29
PRKAB1-206ENST00000541640 ZBTB40Q9NUA8 1239 aa16.85■□□□□ 0.29
PRKAB1-206ENST00000541640 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.85■□□□□ 0.29
PRKAB1-206ENST00000541640 IFT57Q9NWB7 429 aa16.84■□□□□ 0.29
PRKAB1-206ENST00000541640 PLEKHG1Q9ULL1 1385 aa16.84■□□□□ 0.29
PRKAB1-206ENST00000541640 ZNF853P0CG23 659 aa16.84■□□□□ 0.29
PRKAB1-206ENST00000541640 GNAI1P63096 354 aa16.84■□□□□ 0.29
PRKAB1-206ENST00000541640 LMOD3Q0VAK6 560 aa16.82■□□□□ 0.28
PRKAB1-206ENST00000541640 SMC5Q8IY18 1101 aa16.82■□□□□ 0.28
PRKAB1-206ENST00000541640 VAMP4O75379 141 aa16.82■□□□□ 0.28
PRKAB1-206ENST00000541640 NFKBIBQ15653 356 aa16.81■□□□□ 0.28
PRKAB1-206ENST00000541640 ARHGAP45Q92619 1136 aa16.81■□□□□ 0.28
PRKAB1-206ENST00000541640 PTCH1Q13635 1447 aa16.81■□□□□ 0.28
PRKAB1-206ENST00000541640 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
PRKAB1-206ENST00000541640 PIK3R4Q99570 1358 aa16.81■□□□□ 0.28
PRKAB1-206ENST00000541640 UPF2Q9HAU5 1272 aaKnown RBP16.8■□□□□ 0.28
PRKAB1-206ENST00000541640 NALCNQ8IZF0 1738 aa16.8■□□□□ 0.28
PRKAB1-206ENST00000541640 MRPL50Q8N5N7 158 aaKnown RBP16.8■□□□□ 0.28
PRKAB1-206ENST00000541640 THUMPD2Q9BTF0 503 aaKnown RBP16.8■□□□□ 0.28
PRKAB1-206ENST00000541640 PLEKHG3A1L390 1219 aa16.79■□□□□ 0.28
PRKAB1-206ENST00000541640 TBC1D32Q96NH3 1257 aa16.79■□□□□ 0.28
PRKAB1-206ENST00000541640 MBIPQ9NS73 344 aa16.79■□□□□ 0.28
PRKAB1-206ENST00000541640 CFAP44Q96MT7 982 aa16.79■□□□□ 0.28
PRKAB1-206ENST00000541640 TTC21BQ7Z4L5 1316 aa16.79■□□□□ 0.28
PRKAB1-206ENST00000541640 OVOS2A0A0J9YW53 1432 aa16.79■□□□□ 0.28
PRKAB1-206ENST00000541640 OVOS2Q6IE36 1432 aa16.79■□□□□ 0.28
PRKAB1-206ENST00000541640 BECN1Q14457 450 aa16.78■□□□□ 0.28
PRKAB1-206ENST00000541640 CHMP4BQ9H444 224 aaKnown RBP16.78■□□□□ 0.28
PRKAB1-206ENST00000541640 LTKP29376 864 aa16.78■□□□□ 0.28
PRKAB1-206ENST00000541640 TSPYL6Q8N831 410 aa16.77■□□□□ 0.28
PRKAB1-206ENST00000541640 USP6P35125 1406 aa16.77■□□□□ 0.27
PRKAB1-206ENST00000541640 ACEP12821 1306 aa16.76■□□□□ 0.27
PRKAB1-206ENST00000541640 RGPD1P0DJD0 1748 aa16.76■□□□□ 0.27
PRKAB1-206ENST00000541640 PTPRUQ92729 1446 aa16.76■□□□□ 0.27
PRKAB1-206ENST00000541640 SLIT1O75093 1534 aa16.75■□□□□ 0.27
PRKAB1-206ENST00000541640 ZBTB7BO15156 539 aaPredicted RBP16.75■□□□□ 0.27
PRKAB1-206ENST00000541640 NUCB1Q02818 461 aa16.75■□□□□ 0.27
PRKAB1-206ENST00000541640 TWISTNBQ3B726 338 aaPredicted RBP16.75■□□□□ 0.27
PRKAB1-206ENST00000541640 ARHGAP23Q9P227 1491 aa16.75■□□□□ 0.27
PRKAB1-206ENST00000541640 PEAK1Q9H792 1746 aa16.74■□□□□ 0.27
PRKAB1-206ENST00000541640 ABCC4O15439 1325 aa16.74■□□□□ 0.27
PRKAB1-206ENST00000541640 EIF4A2Q14240 407 aaKnown RBP16.74■□□□□ 0.27
PRKAB1-206ENST00000541640 USP31Q70CQ4 1352 aa16.74■□□□□ 0.27
PRKAB1-206ENST00000541640 SSH2Q76I76 1423 aa16.74■□□□□ 0.27
PRKAB1-206ENST00000541640 FAM83GA6ND36 823 aa16.72■□□□□ 0.27
PRKAB1-206ENST00000541640 C8orf58Q8NAV2 365 aa16.72■□□□□ 0.27
PRKAB1-206ENST00000541640 EID1Q9Y6B2 187 aa16.72■□□□□ 0.27
PRKAB1-206ENST00000541640 THEMISQ8N1K5 641 aaPredicted RBP16.71■□□□□ 0.27
PRKAB1-206ENST00000541640 CEP170BQ9Y4F5 1589 aaPredicted RBP16.71■□□□□ 0.27
PRKAB1-206ENST00000541640 DIP2AQ14689 1571 aa16.71■□□□□ 0.26
PRKAB1-206ENST00000541640 KIF24Q5T7B8 1368 aa16.7■□□□□ 0.26
PRKAB1-206ENST00000541640 SULT6B1Q6IMI4 303 aa16.7■□□□□ 0.26
PRKAB1-206ENST00000541640 CHD1LQ86WJ1 897 aa16.7■□□□□ 0.26
PRKAB1-206ENST00000541640 GCC1Q96CN9 775 aa16.7■□□□□ 0.26
PRKAB1-206ENST00000541640 API5Q9BZZ5 524 aaKnown RBP16.7■□□□□ 0.26
PRKAB1-206ENST00000541640 FMN2Q9NZ56 1722 aa16.7■□□□□ 0.26
PRKAB1-206ENST00000541640 ELL2O00472 640 aaPredicted RBP16.7■□□□□ 0.26
PRKAB1-206ENST00000541640 AEBP1Q8IUX7 1158 aa16.7■□□□□ 0.26
PRKAB1-206ENST00000541640 TTC21AQ8NDW8 1320 aa16.7■□□□□ 0.26
PRKAB1-206ENST00000541640 TBX22Q9Y458 520 aa16.69■□□□□ 0.26
PRKAB1-206ENST00000541640 DCTN1Q14203 1278 aa16.69■□□□□ 0.26
PRKAB1-206ENST00000541640 SLC26A8Q96RN1 970 aa16.69■□□□□ 0.26
PRKAB1-206ENST00000541640 GSE1Q14687 1217 aa16.68■□□□□ 0.26
PRKAB1-206ENST00000541640 C22orf23Q9BZE7 217 aa16.68■□□□□ 0.26
PRKAB1-206ENST00000541640 AMOTL2Q9Y2J4 779 aa16.68■□□□□ 0.26
PRKAB1-206ENST00000541640 FRAT2O75474 233 aaPredicted RBP16.68■□□□□ 0.26
PRKAB1-206ENST00000541640 HAP1P54257 671 aaPredicted RBP16.68■□□□□ 0.26
PRKAB1-206ENST00000541640 TBC1D2Q9BYX2 928 aa16.68■□□□□ 0.26
PRKAB1-206ENST00000541640 NUTM2FA1L443 756 aa16.67■□□□□ 0.26
PRKAB1-206ENST00000541640 CHL1O00533 1208 aa16.67■□□□□ 0.26
PRKAB1-206ENST00000541640 LNPKQ9C0E8 428 aa16.67■□□□□ 0.26
PRKAB1-206ENST00000541640 SETD1BQ9UPS6 1966 aaKnown RBP16.67■□□□□ 0.26
PRKAB1-206ENST00000541640 KIAA0232Q92628 1395 aa16.67■□□□□ 0.26
PRKAB1-206ENST00000541640 ANTXR1Q9H6X2 564 aa16.67■□□□□ 0.26
PRKAB1-206ENST00000541640 ARHGEF10O15013 1369 aa16.66■□□□□ 0.26
PRKAB1-206ENST00000541640 MFAP1P55081 439 aaKnown RBP16.66■□□□□ 0.26
PRKAB1-206ENST00000541640 HSP90AB2PQ58FF8 381 aa16.66■□□□□ 0.26
PRKAB1-206ENST00000541640 XRN1Q8IZH2 1706 aaKnown RBP16.66■□□□□ 0.26
PRKAB1-206ENST00000541640 RGPD8O14715 1765 aaPredicted RBP16.66■□□□□ 0.26
PRKAB1-206ENST00000541640 ZNF142P52746 1687 aaPredicted RBP16.66■□□□□ 0.26
PRKAB1-206ENST00000541640 BMP2KLQ5H9B9 411 aa16.65■□□□□ 0.26
PRKAB1-206ENST00000541640 SIRT2Q8IXJ6 389 aa16.65■□□□□ 0.26
PRKAB1-206ENST00000541640 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.25
PRKAB1-206ENST00000541640 SBNO1A3KN83 1393 aa16.64■□□□□ 0.25
PRKAB1-206ENST00000541640 CRB1P82279 1406 aa16.63■□□□□ 0.25
PRKAB1-206ENST00000541640 ANKRD45Q5TZF3 282 aa16.63■□□□□ 0.25
PRKAB1-206ENST00000541640 INTS3Q68E01 1043 aaKnown RBP16.63■□□□□ 0.25
PRKAB1-206ENST00000541640 PIK3C2AO00443 1686 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms