RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 TRPC5Q9UL62 973 aaPredicted RBP26.63■■□□□ 1.85
DDX55-207ENST00000540763 CHRNA2Q15822 529 aa26.62■■□□□ 1.85
DDX55-207ENST00000540763 BTG4Q9NY30 223 aa26.62■■□□□ 1.85
DDX55-207ENST00000540763 COL5A2P05997 1499 aaPredicted RBP26.62■■□□□ 1.85
DDX55-207ENST00000540763 AMER1Q5JTC6 1135 aaPredicted RBP26.61■■□□□ 1.85
DDX55-207ENST00000540763 RTL1A6NKG5 1358 aa26.6■■□□□ 1.85
DDX55-207ENST00000540763 SOX12O15370 315 aa26.6■■□□□ 1.85
DDX55-207ENST00000540763 FAM208AQ9UK61 1670 aaKnown RBP26.6■■□□□ 1.85
DDX55-207ENST00000540763 KIF24Q5T7B8 1368 aa26.59■■□□□ 1.85
DDX55-207ENST00000540763 BLMP54132 1417 aaPredicted RBP26.58■■□□□ 1.85
DDX55-207ENST00000540763 VPS72Q15906 364 aa26.58■■□□□ 1.85
DDX55-207ENST00000540763 GLI3P10071 1580 aa26.57■■□□□ 1.84
DDX55-207ENST00000540763 PEAK1Q9H792 1746 aa26.56■■□□□ 1.84
DDX55-207ENST00000540763 MAP3K19Q56UN5 1328 aa26.55■■□□□ 1.84
DDX55-207ENST00000540763 ZBTB7CA1YPR0 619 aa26.53■■□□□ 1.84
DDX55-207ENST00000540763 SMG6Q86US8 1419 aaKnown RBP26.52■■□□□ 1.84
DDX55-207ENST00000540763 GJD4Q96KN9 370 aaPredicted RBP26.52■■□□□ 1.84
DDX55-207ENST00000540763 WNK3Q9BYP7 1800 aa26.51■■□□□ 1.83
DDX55-207ENST00000540763 IP6K1Q92551 441 aa26.51■■□□□ 1.83
DDX55-207ENST00000540763 AXIN2Q9Y2T1 843 aa26.51■■□□□ 1.83
DDX55-207ENST00000540763 CRB1P82279 1406 aa26.5■■□□□ 1.83
DDX55-207ENST00000540763 FLT4P35916 1363 aa26.5■■□□□ 1.83
DDX55-207ENST00000540763 ZNF316A6NFI3 1004 aaPredicted RBP26.5■■□□□ 1.83
DDX55-207ENST00000540763 MORC1Q86VD1 984 aa26.5■■□□□ 1.83
DDX55-207ENST00000540763 SPATA31A5Q5VU36 1347 aa26.49■■□□□ 1.83
DDX55-207ENST00000540763 SPATA31A7Q8IWB4 1347 aa26.49■■□□□ 1.83
DDX55-207ENST00000540763 WDR17Q8IZU2 1322 aa26.49■■□□□ 1.83
DDX55-207ENST00000540763 EVA1CP58658 441 aa26.49■■□□□ 1.83
DDX55-207ENST00000540763 RRS1Q15050 365 aaKnown RBP26.49■■□□□ 1.83
DDX55-207ENST00000540763 ERBB3P21860 1342 aa26.48■■□□□ 1.83
DDX55-207ENST00000540763 HOXC9P31274 260 aa26.48■■□□□ 1.83
DDX55-207ENST00000540763 AMPHP49418 695 aa26.48■■□□□ 1.83
DDX55-207ENST00000540763 STRN4Q9NRL3 753 aa26.48■■□□□ 1.83
DDX55-207ENST00000540763 FBLN1P23142 703 aa26.47■■□□□ 1.83
DDX55-207ENST00000540763 THSD7AQ9UPZ6 1657 aa26.47■■□□□ 1.83
DDX55-207ENST00000540763 INSRP06213 1382 aa26.46■■□□□ 1.83
DDX55-207ENST00000540763 SPATA31A1Q5TZJ5 1347 aa26.46■■□□□ 1.83
DDX55-207ENST00000540763 CC2D1BQ5T0F9 858 aaKnown RBP26.44■■□□□ 1.82
DDX55-207ENST00000540763 LARP1Q6PKG0 1096 aaKnown RBP26.44■■□□□ 1.82
DDX55-207ENST00000540763 POLKQ9UBT6 870 aa26.44■■□□□ 1.82
DDX55-207ENST00000540763 CCDC9Q9Y3X0 531 aaKnown RBP26.44■■□□□ 1.82
DDX55-207ENST00000540763 DDX10Q13206 875 aaKnown RBP26.43■■□□□ 1.82
DDX55-207ENST00000540763 THRAP3Q9Y2W1 955 aaKnown RBP26.43■■□□□ 1.82
DDX55-207ENST00000540763 EMILIN1Q9Y6C2 1016 aa26.43■■□□□ 1.82
DDX55-207ENST00000540763 RGPD2P0DJD1 1756 aa26.43■■□□□ 1.82
DDX55-207ENST00000540763 ANKRD24Q8TF21 1146 aa26.42■■□□□ 1.82
DDX55-207ENST00000540763 PARP4Q9UKK3 1724 aaKnown RBP26.42■■□□□ 1.82
DDX55-207ENST00000540763 ONECUT3O60422 494 aaPredicted RBP26.41■■□□□ 1.82
DDX55-207ENST00000540763 TNNT2P45379 298 aaPredicted RBP26.4■■□□□ 1.82
DDX55-207ENST00000540763 BARGINQ6ZT62 677 aa26.4■■□□□ 1.82
DDX55-207ENST00000540763 TOM1L2Q6ZVM7 507 aa26.4■■□□□ 1.82
DDX55-207ENST00000540763 CARD10Q9BWT7 1032 aa26.4■■□□□ 1.82
DDX55-207ENST00000540763 BRWD3Q6RI45 1802 aa26.39■■□□□ 1.82
DDX55-207ENST00000540763 CSB-PGBD3P0DP91 1061 aa26.39■■□□□ 1.82
DDX55-207ENST00000540763 TCP11L2Q8N4U5 519 aa26.39■■□□□ 1.82
DDX55-207ENST00000540763 PARD3Q8TEW0 1356 aa26.36■■□□□ 1.81
DDX55-207ENST00000540763 HSP90AB2PQ58FF8 381 aa26.36■■□□□ 1.81
DDX55-207ENST00000540763 EP400Q96L91 3159 aa26.35■■□□□ 1.81
DDX55-207ENST00000540763 PPM1GO15355 546 aaPredicted RBP26.34■■□□□ 1.81
DDX55-207ENST00000540763 LRRC37A3O60309 1634 aa26.34■■□□□ 1.81
DDX55-207ENST00000540763 DISP2A7MBM2 1401 aa26.33■■□□□ 1.81
DDX55-207ENST00000540763 FAM98CQ17RN3 349 aaKnown RBP26.33■■□□□ 1.81
DDX55-207ENST00000540763 CCDC125Q86Z20 511 aa26.33■■□□□ 1.81
DDX55-207ENST00000540763 NCAPD2Q15021 1401 aa26.32■■□□□ 1.8
DDX55-207ENST00000540763 CDCA7Q9BWT1 371 aaPredicted RBP26.32■■□□□ 1.8
DDX55-207ENST00000540763 USP35Q9P2H5 1018 aa26.32■■□□□ 1.8
DDX55-207ENST00000540763 NLRP2Q9NX02 1062 aa26.31■■□□□ 1.8
DDX55-207ENST00000540763 RGPD1P0DJD0 1748 aa26.31■■□□□ 1.8
DDX55-207ENST00000540763 SEPT12Q8IYM1 358 aa26.3■■□□□ 1.8
DDX55-207ENST00000540763 LTV1Q96GA3 475 aaPredicted RBP26.3■■□□□ 1.8
DDX55-207ENST00000540763 MTHFSP49914 203 aa26.29■■□□□ 1.8
DDX55-207ENST00000540763 RALBP1Q15311 655 aa26.27■■□□□ 1.8
DDX55-207ENST00000540763 COL3A1P02461 1466 aaPredicted RBP26.27■■□□□ 1.8
DDX55-207ENST00000540763 EIF4A2Q14240 407 aaKnown RBP26.26■■□□□ 1.79
DDX55-207ENST00000540763 PPP2R1AP30153 589 aa26.25■■□□□ 1.79
DDX55-207ENST00000540763 CNGB1Q14028 1251 aaPredicted RBP26.25■■□□□ 1.79
DDX55-207ENST00000540763 A0A0G2JS52 829 aa26.24■■□□□ 1.79
DDX55-207ENST00000540763 MYT1Q01538 1121 aa26.24■■□□□ 1.79
DDX55-207ENST00000540763 NBPF6Q5VWK0 638 aa26.24■■□□□ 1.79
DDX55-207ENST00000540763 NBPF4Q96M43 638 aa26.24■■□□□ 1.79
DDX55-207ENST00000540763 TNS2Q63HR2 1409 aa26.23■■□□□ 1.79
DDX55-207ENST00000540763 PLEKHG2Q9H7P9 1386 aa26.23■■□□□ 1.79
DDX55-207ENST00000540763 IL2RBP14784 551 aa26.23■■□□□ 1.79
DDX55-207ENST00000540763 IGSF1Q8N6C5 1336 aa26.22■■□□□ 1.79
DDX55-207ENST00000540763 PKD1L3Q7Z443 1732 aa26.22■■□□□ 1.79
DDX55-207ENST00000540763 SHANK3Q9BYB0 1731 aa26.21■■□□□ 1.79
DDX55-207ENST00000540763 KRT27Q7Z3Y8 459 aa26.2■■□□□ 1.78
DDX55-207ENST00000540763 EYA1Q99502 592 aa26.2■■□□□ 1.78
DDX55-207ENST00000540763 MEGF6O75095 1541 aa26.19■■□□□ 1.78
DDX55-207ENST00000540763 IL13P35225 146 aa26.19■■□□□ 1.78
DDX55-207ENST00000540763 CFAP53Q96M91 514 aa26.19■■□□□ 1.78
DDX55-207ENST00000540763 OVOS2A0A0G2JMS6 1433 aa26.19■■□□□ 1.78
DDX55-207ENST00000540763 SRCAPQ6ZRS2 3230 aa26.19■■□□□ 1.78
DDX55-207ENST00000540763 DDB1Q16531 1140 aa26.18■■□□□ 1.78
DDX55-207ENST00000540763 MYBBP1AQ9BQG0 1328 aaKnown RBP26.16■■□□□ 1.78
DDX55-207ENST00000540763 DIAPH1O60610 1272 aaKnown RBP26.16■■□□□ 1.78
DDX55-207ENST00000540763 PRKRIP1Q9H875 184 aaPredicted RBP26.16■■□□□ 1.78
DDX55-207ENST00000540763 KDRP35968 1356 aa26.16■■□□□ 1.78
DDX55-207ENST00000540763 PDE3BQ13370 1112 aa26.15■■□□□ 1.78
DDX55-207ENST00000540763 USHBP1Q8N6Y0 703 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms