RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 ZBTB7CA1YPR0 619 aa23.8■■□□□ 1.4
SLC3A2-213ENST00000539458 PER1O15534 1290 aaPredicted RBP23.8■■□□□ 1.4
SLC3A2-213ENST00000539458 AMER1Q5JTC6 1135 aaPredicted RBP23.76■■□□□ 1.39
SLC3A2-213ENST00000539458 COL5A2P05997 1499 aaPredicted RBP23.75■■□□□ 1.39
SLC3A2-213ENST00000539458 VPS72Q15906 364 aa23.75■■□□□ 1.39
SLC3A2-213ENST00000539458 MAP3K19Q56UN5 1328 aa23.73■■□□□ 1.39
SLC3A2-213ENST00000539458 NPC1L1Q9UHC9 1359 aa23.73■■□□□ 1.39
SLC3A2-213ENST00000539458 FBLN1P23142 703 aa23.72■■□□□ 1.39
SLC3A2-213ENST00000539458 AXIN2Q9Y2T1 843 aa23.72■■□□□ 1.39
SLC3A2-213ENST00000539458 RTL1A6NKG5 1358 aa23.72■■□□□ 1.39
SLC3A2-213ENST00000539458 GLI3P10071 1580 aa23.72■■□□□ 1.39
SLC3A2-213ENST00000539458 RGPD5Q99666 1765 aa23.72■■□□□ 1.39
SLC3A2-213ENST00000539458 BLMP54132 1417 aaPredicted RBP23.71■■□□□ 1.39
SLC3A2-213ENST00000539458 GJD4Q96KN9 370 aaPredicted RBP23.71■■□□□ 1.39
SLC3A2-213ENST00000539458 STRN4Q9NRL3 753 aa23.71■■□□□ 1.39
SLC3A2-213ENST00000539458 EVA1CP58658 441 aa23.7■■□□□ 1.38
SLC3A2-213ENST00000539458 RRS1Q15050 365 aaKnown RBP23.7■■□□□ 1.38
SLC3A2-213ENST00000539458 MORC1Q86VD1 984 aa23.7■■□□□ 1.38
SLC3A2-213ENST00000539458 CCDC125Q86Z20 511 aa23.7■■□□□ 1.38
SLC3A2-213ENST00000539458 KIF24Q5T7B8 1368 aa23.69■■□□□ 1.38
SLC3A2-213ENST00000539458 IP6K1Q92551 441 aa23.69■■□□□ 1.38
SLC3A2-213ENST00000539458 PEAK1Q9H792 1746 aa23.68■■□□□ 1.38
SLC3A2-213ENST00000539458 AMPHP49418 695 aa23.68■■□□□ 1.38
SLC3A2-213ENST00000539458 CCDC9Q9Y3X0 531 aaKnown RBP23.68■■□□□ 1.38
SLC3A2-213ENST00000539458 SPATA31A5Q5VU36 1347 aa23.67■■□□□ 1.38
SLC3A2-213ENST00000539458 SPATA31A7Q8IWB4 1347 aa23.67■■□□□ 1.38
SLC3A2-213ENST00000539458 ZNF316A6NFI3 1004 aaPredicted RBP23.67■■□□□ 1.38
SLC3A2-213ENST00000539458 HOXC9P31274 260 aa23.67■■□□□ 1.38
SLC3A2-213ENST00000539458 LARP1Q6PKG0 1096 aaKnown RBP23.67■■□□□ 1.38
SLC3A2-213ENST00000539458 CRB1P82279 1406 aa23.67■■□□□ 1.38
SLC3A2-213ENST00000539458 WDR17Q8IZU2 1322 aa23.66■■□□□ 1.38
SLC3A2-213ENST00000539458 TNNT2P45379 298 aaPredicted RBP23.66■■□□□ 1.38
SLC3A2-213ENST00000539458 CC2D1BQ5T0F9 858 aaKnown RBP23.66■■□□□ 1.38
SLC3A2-213ENST00000539458 FLT4P35916 1363 aa23.65■■□□□ 1.38
SLC3A2-213ENST00000539458 ERBB3P21860 1342 aa23.65■■□□□ 1.38
SLC3A2-213ENST00000539458 SPATA31A1Q5TZJ5 1347 aa23.65■■□□□ 1.38
SLC3A2-213ENST00000539458 EMILIN1Q9Y6C2 1016 aa23.65■■□□□ 1.38
SLC3A2-213ENST00000539458 MAP2P11137 1827 aaKnown RBP23.65■■□□□ 1.38
SLC3A2-213ENST00000539458 DDX10Q13206 875 aaKnown RBP23.64■■□□□ 1.37
SLC3A2-213ENST00000539458 SMG6Q86US8 1419 aaKnown RBP23.64■■□□□ 1.37
SLC3A2-213ENST00000539458 FAM208AQ9UK61 1670 aaKnown RBP23.64■■□□□ 1.37
SLC3A2-213ENST00000539458 POLKQ9UBT6 870 aa23.63■■□□□ 1.37
SLC3A2-213ENST00000539458 CSB-PGBD3P0DP91 1061 aa23.62■■□□□ 1.37
SLC3A2-213ENST00000539458 ANKRD24Q8TF21 1146 aa23.62■■□□□ 1.37
SLC3A2-213ENST00000539458 INSRP06213 1382 aa23.62■■□□□ 1.37
SLC3A2-213ENST00000539458 TOM1L2Q6ZVM7 507 aa23.61■■□□□ 1.37
SLC3A2-213ENST00000539458 PPM1GO15355 546 aaPredicted RBP23.59■■□□□ 1.37
SLC3A2-213ENST00000539458 ONECUT3O60422 494 aaPredicted RBP23.59■■□□□ 1.37
SLC3A2-213ENST00000539458 USP35Q9P2H5 1018 aa23.59■■□□□ 1.37
SLC3A2-213ENST00000539458 THRAP3Q9Y2W1 955 aaKnown RBP23.59■■□□□ 1.37
SLC3A2-213ENST00000539458 THSD7AQ9UPZ6 1657 aa23.59■■□□□ 1.37
SLC3A2-213ENST00000539458 SF3B2Q13435 895 aaKnown RBP23.58■■□□□ 1.37
SLC3A2-213ENST00000539458 CNGB1Q14028 1251 aaPredicted RBP23.58■■□□□ 1.37
SLC3A2-213ENST00000539458 HSP90AB2PQ58FF8 381 aa23.58■■□□□ 1.37
SLC3A2-213ENST00000539458 TCP11L2Q8N4U5 519 aa23.58■■□□□ 1.37
SLC3A2-213ENST00000539458 FAM98CQ17RN3 349 aaKnown RBP23.57■■□□□ 1.36
SLC3A2-213ENST00000539458 BARGINQ6ZT62 677 aa23.57■■□□□ 1.36
SLC3A2-213ENST00000539458 LTV1Q96GA3 475 aaPredicted RBP23.57■■□□□ 1.36
SLC3A2-213ENST00000539458 CARD10Q9BWT7 1032 aa23.57■■□□□ 1.36
SLC3A2-213ENST00000539458 WNK3Q9BYP7 1800 aa23.56■■□□□ 1.36
SLC3A2-213ENST00000539458 NLRP2Q9NX02 1062 aa23.55■■□□□ 1.36
SLC3A2-213ENST00000539458 SEPT12Q8IYM1 358 aa23.53■■□□□ 1.36
SLC3A2-213ENST00000539458 PARD3Q8TEW0 1356 aa23.52■■□□□ 1.36
SLC3A2-213ENST00000539458 PARP4Q9UKK3 1724 aaKnown RBP23.51■■□□□ 1.35
SLC3A2-213ENST00000539458 RGPD2P0DJD1 1756 aa23.51■■□□□ 1.35
SLC3A2-213ENST00000539458 A0A0G2JS52 829 aa23.51■■□□□ 1.35
SLC3A2-213ENST00000539458 MYT1Q01538 1121 aa23.51■■□□□ 1.35
SLC3A2-213ENST00000539458 MTHFSP49914 203 aa23.5■■□□□ 1.35
SLC3A2-213ENST00000539458 DISP2A7MBM2 1401 aa23.5■■□□□ 1.35
SLC3A2-213ENST00000539458 BRWD3Q6RI45 1802 aa23.49■■□□□ 1.35
SLC3A2-213ENST00000539458 CDCA7Q9BWT1 371 aaPredicted RBP23.49■■□□□ 1.35
SLC3A2-213ENST00000539458 LRRC37A3O60309 1634 aa23.48■■□□□ 1.35
SLC3A2-213ENST00000539458 NBPF6Q5VWK0 638 aa23.48■■□□□ 1.35
SLC3A2-213ENST00000539458 NBPF4Q96M43 638 aa23.48■■□□□ 1.35
SLC3A2-213ENST00000539458 EIF4A2Q14240 407 aaKnown RBP23.47■■□□□ 1.35
SLC3A2-213ENST00000539458 PPP2R1AP30153 589 aa23.46■■□□□ 1.35
SLC3A2-213ENST00000539458 NCAPD2Q15021 1401 aa23.46■■□□□ 1.35
SLC3A2-213ENST00000539458 IL2RBP14784 551 aa23.44■■□□□ 1.34
SLC3A2-213ENST00000539458 RALBP1Q15311 655 aa23.44■■□□□ 1.34
SLC3A2-213ENST00000539458 KRT27Q7Z3Y8 459 aa23.44■■□□□ 1.34
SLC3A2-213ENST00000539458 COL3A1P02461 1466 aaPredicted RBP23.43■■□□□ 1.34
SLC3A2-213ENST00000539458 USHBP1Q8N6Y0 703 aa23.42■■□□□ 1.34
SLC3A2-213ENST00000539458 EYA1Q99502 592 aa23.42■■□□□ 1.34
SLC3A2-213ENST00000539458 RGPD1P0DJD0 1748 aa23.42■■□□□ 1.34
SLC3A2-213ENST00000539458 DDB1Q16531 1140 aa23.41■■□□□ 1.34
SLC3A2-213ENST00000539458 DEFB132Q7Z7B7 95 aa23.41■■□□□ 1.34
SLC3A2-213ENST00000539458 TNS2Q63HR2 1409 aa23.41■■□□□ 1.34
SLC3A2-213ENST00000539458 IGSF1Q8N6C5 1336 aa23.4■■□□□ 1.34
SLC3A2-213ENST00000539458 MEGF6O75095 1541 aa23.4■■□□□ 1.34
SLC3A2-213ENST00000539458 IL13P35225 146 aa23.4■■□□□ 1.34
SLC3A2-213ENST00000539458 PDE3BQ13370 1112 aa23.39■■□□□ 1.33
SLC3A2-213ENST00000539458 CFAP53Q96M91 514 aa23.39■■□□□ 1.33
SLC3A2-213ENST00000539458 DIAPH1O60610 1272 aaKnown RBP23.38■■□□□ 1.33
SLC3A2-213ENST00000539458 BAG6P46379 1132 aa23.38■■□□□ 1.33
SLC3A2-213ENST00000539458 OVOS2A0A0G2JMS6 1433 aa23.38■■□□□ 1.33
SLC3A2-213ENST00000539458 EXOC5O00471 708 aa23.37■■□□□ 1.33
SLC3A2-213ENST00000539458 RAPGEF4Q8WZA2 1011 aa23.37■■□□□ 1.33
SLC3A2-213ENST00000539458 PRKRIP1Q9H875 184 aaPredicted RBP23.36■■□□□ 1.33
SLC3A2-213ENST00000539458 MYBBP1AQ9BQG0 1328 aaKnown RBP23.35■■□□□ 1.33
SLC3A2-213ENST00000539458 TATP17735 454 aaPredicted RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms