RNA–Protein interactions for RNA: ENST00000539318.5

NPIPB4-211, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-211ENST00000539318 RRS1Q15050 365 aaKnown RBP12.21□□□□□ -0.45
NPIPB4-211ENST00000539318 CC2D1BQ5T0F9 858 aaKnown RBP12.21□□□□□ -0.45
NPIPB4-211ENST00000539318 POTEAQ6S8J7 498 aa12.21□□□□□ -0.45
NPIPB4-211ENST00000539318 MORC1Q86VD1 984 aa12.21□□□□□ -0.45
NPIPB4-211ENST00000539318 PLCH1Q4KWH8 1693 aa12.21□□□□□ -0.45
NPIPB4-211ENST00000539318 ZNF772Q68DY9 489 aaPredicted RBP12.2□□□□□ -0.46
NPIPB4-211ENST00000539318 QTRT2Q9H974 415 aaKnown RBP12.2□□□□□ -0.46
NPIPB4-211ENST00000539318 NRAPQ86VF7 1730 aa12.2□□□□□ -0.46
NPIPB4-211ENST00000539318 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.2□□□□□ -0.46
NPIPB4-211ENST00000539318 HOXC9P31274 260 aa12.19□□□□□ -0.46
NPIPB4-211ENST00000539318 VPS72Q15906 364 aa12.19□□□□□ -0.46
NPIPB4-211ENST00000539318 EMILIN1Q9Y6C2 1016 aa12.19□□□□□ -0.46
NPIPB4-211ENST00000539318 ATRNO75882 1429 aa12.19□□□□□ -0.46
NPIPB4-211ENST00000539318 KIF24Q5T7B8 1368 aa12.18□□□□□ -0.46
NPIPB4-211ENST00000539318 ABCC6O95255 1503 aa12.18□□□□□ -0.46
NPIPB4-211ENST00000539318 PEAK1Q9H792 1746 aa12.18□□□□□ -0.46
NPIPB4-211ENST00000539318 TNNT2P45379 298 aaPredicted RBP12.18□□□□□ -0.46
NPIPB4-211ENST00000539318 TRPC5Q9UL62 973 aaPredicted RBP12.18□□□□□ -0.46
NPIPB4-211ENST00000539318 COL5A2P05997 1499 aaPredicted RBP12.17□□□□□ -0.46
NPIPB4-211ENST00000539318 ZBTB7CA1YPR0 619 aa12.17□□□□□ -0.46
NPIPB4-211ENST00000539318 AMPHP49418 695 aa12.17□□□□□ -0.46
NPIPB4-211ENST00000539318 HSP90AB2PQ58FF8 381 aa12.17□□□□□ -0.46
NPIPB4-211ENST00000539318 ONECUT3O60422 494 aaPredicted RBP12.16□□□□□ -0.46
NPIPB4-211ENST00000539318 LARP1Q6PKG0 1096 aaKnown RBP12.16□□□□□ -0.46
NPIPB4-211ENST00000539318 GJD4Q96KN9 370 aaPredicted RBP12.16□□□□□ -0.46
NPIPB4-211ENST00000539318 SMG6Q86US8 1419 aaKnown RBP12.16□□□□□ -0.46
NPIPB4-211ENST00000539318 RTL1A6NKG5 1358 aa12.16□□□□□ -0.46
NPIPB4-211ENST00000539318 INSRP06213 1382 aa12.16□□□□□ -0.46
NPIPB4-211ENST00000539318 PARD3Q8TEW0 1356 aa12.16□□□□□ -0.46
NPIPB4-211ENST00000539318 ERBB3P21860 1342 aa12.15□□□□□ -0.46
NPIPB4-211ENST00000539318 SPATA31A5Q5VU36 1347 aa12.15□□□□□ -0.46
NPIPB4-211ENST00000539318 SPATA31A7Q8IWB4 1347 aa12.15□□□□□ -0.46
NPIPB4-211ENST00000539318 WDR17Q8IZU2 1322 aa12.15□□□□□ -0.46
NPIPB4-211ENST00000539318 BLMP54132 1417 aaPredicted RBP12.15□□□□□ -0.46
NPIPB4-211ENST00000539318 MTHFSP49914 203 aa12.15□□□□□ -0.46
NPIPB4-211ENST00000539318 EVA1CP58658 441 aa12.15□□□□□ -0.46
NPIPB4-211ENST00000539318 STRN4Q9NRL3 753 aa12.15□□□□□ -0.46
NPIPB4-211ENST00000539318 FLT4P35916 1363 aa12.15□□□□□ -0.46
NPIPB4-211ENST00000539318 SPATA31A1Q5TZJ5 1347 aa12.14□□□□□ -0.47
NPIPB4-211ENST00000539318 PPP2R1AP30153 589 aa12.14□□□□□ -0.47
NPIPB4-211ENST00000539318 RBM6P78332 1123 aaKnown RBP12.14□□□□□ -0.47
NPIPB4-211ENST00000539318 ANKRD24Q8TF21 1146 aa12.14□□□□□ -0.47
NPIPB4-211ENST00000539318 RGPD2P0DJD1 1756 aa12.13□□□□□ -0.47
NPIPB4-211ENST00000539318 RXRBP28702 533 aa12.13□□□□□ -0.47
NPIPB4-211ENST00000539318 MAPK8IP2Q13387 824 aaPredicted RBP12.13□□□□□ -0.47
NPIPB4-211ENST00000539318 CNGB1Q14028 1251 aaPredicted RBP12.13□□□□□ -0.47
NPIPB4-211ENST00000539318 RALBP1Q15311 655 aa12.13□□□□□ -0.47
NPIPB4-211ENST00000539318 CARD10Q9BWT7 1032 aa12.13□□□□□ -0.47
NPIPB4-211ENST00000539318 GLI3P10071 1580 aa12.13□□□□□ -0.47
NPIPB4-211ENST00000539318 PPM1GO15355 546 aaPredicted RBP12.12□□□□□ -0.47
NPIPB4-211ENST00000539318 NBPF6Q5VWK0 638 aa12.12□□□□□ -0.47
NPIPB4-211ENST00000539318 NBPF4Q96M43 638 aa12.12□□□□□ -0.47
NPIPB4-211ENST00000539318 PRKRIP1Q9H875 184 aaPredicted RBP12.12□□□□□ -0.47
NPIPB4-211ENST00000539318 CRB1P82279 1406 aa12.11□□□□□ -0.47
NPIPB4-211ENST00000539318 EIF4A2Q14240 407 aaKnown RBP12.11□□□□□ -0.47
NPIPB4-211ENST00000539318 BARGINQ6ZT62 677 aa12.11□□□□□ -0.47
NPIPB4-211ENST00000539318 LTV1Q96GA3 475 aaPredicted RBP12.11□□□□□ -0.47
NPIPB4-211ENST00000539318 THRAP3Q9Y2W1 955 aaKnown RBP12.11□□□□□ -0.47
NPIPB4-211ENST00000539318 CDK12Q9NYV4 1490 aaPredicted RBP12.1□□□□□ -0.47
NPIPB4-211ENST00000539318 IL13P35225 146 aa12.1□□□□□ -0.47
NPIPB4-211ENST00000539318 TOM1L2Q6ZVM7 507 aa12.1□□□□□ -0.47
NPIPB4-211ENST00000539318 TCP11L2Q8N4U5 519 aa12.1□□□□□ -0.47
NPIPB4-211ENST00000539318 CSB-PGBD3P0DP91 1061 aa12.09□□□□□ -0.47
NPIPB4-211ENST00000539318 EYA1Q99502 592 aa12.09□□□□□ -0.47
NPIPB4-211ENST00000539318 NLRP2Q9NX02 1062 aa12.09□□□□□ -0.47
NPIPB4-211ENST00000539318 CACNB1Q02641 598 aaPredicted RBP12.08□□□□□ -0.48
NPIPB4-211ENST00000539318 ILDR2Q71H61 639 aa12.08□□□□□ -0.48
NPIPB4-211ENST00000539318 USP35Q9P2H5 1018 aa12.08□□□□□ -0.48
NPIPB4-211ENST00000539318 CCDC9Q9Y3X0 531 aaKnown RBP12.08□□□□□ -0.48
NPIPB4-211ENST00000539318 NCAPD2Q15021 1401 aa12.08□□□□□ -0.48
NPIPB4-211ENST00000539318 COL3A1P02461 1466 aaPredicted RBP12.08□□□□□ -0.48
NPIPB4-211ENST00000539318 FAM208AQ9UK61 1670 aaKnown RBP12.07□□□□□ -0.48
NPIPB4-211ENST00000539318 FAM98CQ17RN3 349 aaKnown RBP12.07□□□□□ -0.48
NPIPB4-211ENST00000539318 DISP2A7MBM2 1401 aa12.06□□□□□ -0.48
NPIPB4-211ENST00000539318 DIAPH1O60610 1272 aaKnown RBP12.06□□□□□ -0.48
NPIPB4-211ENST00000539318 SEPT12Q8IYM1 358 aa12.06□□□□□ -0.48
NPIPB4-211ENST00000539318 BRWD3Q6RI45 1802 aa12.06□□□□□ -0.48
NPIPB4-211ENST00000539318 THSD7AQ9UPZ6 1657 aa12.06□□□□□ -0.48
NPIPB4-211ENST00000539318 IGSF1Q8N6C5 1336 aa12.06□□□□□ -0.48
NPIPB4-211ENST00000539318 MYBBP1AQ9BQG0 1328 aaKnown RBP12.06□□□□□ -0.48
NPIPB4-211ENST00000539318 RGPD1P0DJD0 1748 aa12.06□□□□□ -0.48
NPIPB4-211ENST00000539318 CDCA7Q9BWT1 371 aaPredicted RBP12.05□□□□□ -0.48
NPIPB4-211ENST00000539318 RGS12O14924 1447 aa12.04□□□□□ -0.48
NPIPB4-211ENST00000539318 USHBP1Q8N6Y0 703 aa12.04□□□□□ -0.48
NPIPB4-211ENST00000539318 WNK3Q9BYP7 1800 aa12.04□□□□□ -0.48
NPIPB4-211ENST00000539318 IL2RBP14784 551 aa12.03□□□□□ -0.48
NPIPB4-211ENST00000539318 KDRP35968 1356 aa12.03□□□□□ -0.48
NPIPB4-211ENST00000539318 PARP4Q9UKK3 1724 aaKnown RBP12.03□□□□□ -0.48
NPIPB4-211ENST00000539318 ANP32CO43423 234 aa12.02□□□□□ -0.49
NPIPB4-211ENST00000539318 AEBP1Q8IUX7 1158 aa12.02□□□□□ -0.49
NPIPB4-211ENST00000539318 CFAP53Q96M91 514 aa12.02□□□□□ -0.49
NPIPB4-211ENST00000539318 EP400Q96L91 3159 aa12.02□□□□□ -0.49
NPIPB4-211ENST00000539318 EXOC5O00471 708 aa12.01□□□□□ -0.49
NPIPB4-211ENST00000539318 CCDC184Q52MB2 194 aa12.01□□□□□ -0.49
NPIPB4-211ENST00000539318 MEGF6O75095 1541 aa12.01□□□□□ -0.49
NPIPB4-211ENST00000539318 DDB1Q16531 1140 aa12□□□□□ -0.49
NPIPB4-211ENST00000539318 SULT6B1Q6IMI4 303 aa12□□□□□ -0.49
NPIPB4-211ENST00000539318 PPP4R3CPQ6ZMV5 832 aa12□□□□□ -0.49
NPIPB4-211ENST00000539318 KRT27Q7Z3Y8 459 aa12□□□□□ -0.49
NPIPB4-211ENST00000539318 MARCH10Q8NA82 808 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms