RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 ZBED9Q6R2W3 1325 aa15.58■□□□□ 0.08
SPARC-207ENST00000537849 AHDC1Q5TGY3 1603 aaPredicted RBP15.57■□□□□ 0.08
SPARC-207ENST00000537849 CRYBG1Q9Y4K1 1723 aa15.57■□□□□ 0.08
SPARC-207ENST00000537849 FCHSD2O94868 740 aa15.57■□□□□ 0.08
SPARC-207ENST00000537849 LRRC59Q96AG4 307 aaKnown RBP15.57■□□□□ 0.08
SPARC-207ENST00000537849 APAF1O14727 1248 aa15.56■□□□□ 0.08
SPARC-207ENST00000537849 PHRF1Q9P1Y6 1649 aaKnown RBP15.56■□□□□ 0.08
SPARC-207ENST00000537849 RTL1A6NKG5 1358 aa15.55■□□□□ 0.08
SPARC-207ENST00000537849 ZC3H6P61129 1189 aaKnown RBP15.55■□□□□ 0.08
SPARC-207ENST00000537849 PIP4K2BP78356 416 aa15.55■□□□□ 0.08
SPARC-207ENST00000537849 RSPH6AQ9H0K4 717 aa15.55■□□□□ 0.08
SPARC-207ENST00000537849 AXIN2Q9Y2T1 843 aa15.54■□□□□ 0.08
SPARC-207ENST00000537849 COL18A1P39060 1754 aa15.54■□□□□ 0.08
SPARC-207ENST00000537849 TCP11L2Q8N4U5 519 aa15.53■□□□□ 0.08
SPARC-207ENST00000537849 EYA1Q99502 592 aa15.53■□□□□ 0.08
SPARC-207ENST00000537849 PNNQ9H307 717 aaKnown RBP15.53■□□□□ 0.08
SPARC-207ENST00000537849 SALL2Q9Y467 1007 aaPredicted RBP15.53■□□□□ 0.08
SPARC-207ENST00000537849 RGPD5Q99666 1765 aa15.53■□□□□ 0.08
SPARC-207ENST00000537849 RGPD1P0DJD0 1748 aa15.53■□□□□ 0.08
SPARC-207ENST00000537849 ZBTB7CA1YPR0 619 aa15.52■□□□□ 0.08
SPARC-207ENST00000537849 HMOX1P09601 288 aa15.52■□□□□ 0.08
SPARC-207ENST00000537849 NCBP3Q53F19 620 aaKnown RBP15.52■□□□□ 0.08
SPARC-207ENST00000537849 CPDO75976 1380 aa15.51■□□□□ 0.07
SPARC-207ENST00000537849 NGEFQ8N5V2 710 aa15.51■□□□□ 0.07
SPARC-207ENST00000537849 PHLPP1O60346 1717 aa15.51■□□□□ 0.07
SPARC-207ENST00000537849 PRKAR2BP31323 418 aa15.5■□□□□ 0.07
SPARC-207ENST00000537849 SULT6B1Q6IMI4 303 aa15.5■□□□□ 0.07
SPARC-207ENST00000537849 AEBP1Q8IUX7 1158 aa15.5■□□□□ 0.07
SPARC-207ENST00000537849 LTV1Q96GA3 475 aaPredicted RBP15.5■□□□□ 0.07
SPARC-207ENST00000537849 PHACTR3Q96KR7 559 aa15.5■□□□□ 0.07
SPARC-207ENST00000537849 IGSF1Q8N6C5 1336 aa15.49■□□□□ 0.07
SPARC-207ENST00000537849 ZNF521Q96K83 1311 aa15.49■□□□□ 0.07
SPARC-207ENST00000537849 TMPOP42166 694 aaKnown RBP15.49■□□□□ 0.07
SPARC-207ENST00000537849 PHF23Q9BUL5 403 aaPredicted RBP15.49■□□□□ 0.07
SPARC-207ENST00000537849 COL16A1Q07092 1604 aaPredicted RBP15.49■□□□□ 0.07
SPARC-207ENST00000537849 KIAA0232Q92628 1395 aa15.49■□□□□ 0.07
SPARC-207ENST00000537849 CHRNA2Q15822 529 aa15.48■□□□□ 0.07
SPARC-207ENST00000537849 NBPF6Q5VWK0 638 aa15.48■□□□□ 0.07
SPARC-207ENST00000537849 ANKRD24Q8TF21 1146 aa15.48■□□□□ 0.07
SPARC-207ENST00000537849 NBPF4Q96M43 638 aa15.48■□□□□ 0.07
SPARC-207ENST00000537849 RGPD2P0DJD1 1756 aa15.48■□□□□ 0.07
SPARC-207ENST00000537849 ABCA3Q99758 1704 aa15.48■□□□□ 0.07
SPARC-207ENST00000537849 PDE3BQ13370 1112 aa15.47■□□□□ 0.07
SPARC-207ENST00000537849 RRP7AQ9Y3A4 280 aaKnown RBP15.47■□□□□ 0.07
SPARC-207ENST00000537849 KDRP35968 1356 aa15.47■□□□□ 0.07
SPARC-207ENST00000537849 COL22A1Q8NFW1 1626 aaPredicted RBP15.46■□□□□ 0.07
SPARC-207ENST00000537849 FAM83GA6ND36 823 aa15.46■□□□□ 0.07
SPARC-207ENST00000537849 CCDC27Q2M243 656 aa15.46■□□□□ 0.07
SPARC-207ENST00000537849 WWC1Q8IX03 1113 aa15.46■□□□□ 0.07
SPARC-207ENST00000537849 NEUROD2Q15784 382 aa15.45■□□□□ 0.06
SPARC-207ENST00000537849 CDCA7LQ96GN5 454 aa15.45■□□□□ 0.06
SPARC-207ENST00000537849 TRIM35Q9UPQ4 493 aa15.45■□□□□ 0.06
SPARC-207ENST00000537849 MAPK8IP3Q9UPT6 1336 aa15.44■□□□□ 0.06
SPARC-207ENST00000537849 ABCC6O95255 1503 aa15.44■□□□□ 0.06
SPARC-207ENST00000537849 HAP1P54257 671 aaPredicted RBP15.44■□□□□ 0.06
SPARC-207ENST00000537849 NFE2L2Q16236 605 aa15.44■□□□□ 0.06
SPARC-207ENST00000537849 PRDM11Q9NQV5 511 aa15.44■□□□□ 0.06
SPARC-207ENST00000537849 ERBB3P21860 1342 aa15.43■□□□□ 0.06
SPARC-207ENST00000537849 RIPK4P57078 832 aa15.43■□□□□ 0.06
SPARC-207ENST00000537849 TRMT2AQ8IZ69 625 aaKnown RBP15.43■□□□□ 0.06
SPARC-207ENST00000537849 NCAPD2Q15021 1401 aa15.43■□□□□ 0.06
SPARC-207ENST00000537849 LMO7Q8WWI1 1683 aa15.42■□□□□ 0.06
SPARC-207ENST00000537849 CAMTA1Q9Y6Y1 1673 aa15.42■□□□□ 0.06
SPARC-207ENST00000537849 NEFMP07197 916 aa15.42■□□□□ 0.06
SPARC-207ENST00000537849 SLFN5Q08AF3 891 aa15.42■□□□□ 0.06
SPARC-207ENST00000537849 WDR63Q8IWG1 891 aa15.42■□□□□ 0.06
SPARC-207ENST00000537849 USHBP1Q8N6Y0 703 aa15.42■□□□□ 0.06
SPARC-207ENST00000537849 DLG5Q8TDM6 1919 aa15.42■□□□□ 0.06
SPARC-207ENST00000537849 GOLGA2Q08379 1002 aa15.41■□□□□ 0.06
SPARC-207ENST00000537849 SPINK5Q9NQ38 1064 aaPredicted RBP15.41■□□□□ 0.06
SPARC-207ENST00000537849 MTHFSDQ2M296 383 aaKnown RBP15.39■□□□□ 0.05
SPARC-207ENST00000537849 NLRP2Q9NX02 1062 aa15.38■□□□□ 0.05
SPARC-207ENST00000537849 HSPA1LP34931 641 aa15.37■□□□□ 0.05
SPARC-207ENST00000537849 DUSP27Q5VZP5 1158 aa15.37■□□□□ 0.05
SPARC-207ENST00000537849 WDR17Q8IZU2 1322 aa15.37■□□□□ 0.05
SPARC-207ENST00000537849 JCADQ9P266 1359 aa15.36■□□□□ 0.05
SPARC-207ENST00000537849 COL5A2P05997 1499 aaPredicted RBP15.36■□□□□ 0.05
SPARC-207ENST00000537849 E9PSI1 815 aa15.36■□□□□ 0.05
SPARC-207ENST00000537849 CSB-PGBD3P0DP91 1061 aa15.36■□□□□ 0.05
SPARC-207ENST00000537849 COL14A1Q05707 1796 aaKnown RBP15.36■□□□□ 0.05
SPARC-207ENST00000537849 FAM208AQ9UK61 1670 aaKnown RBP15.35■□□□□ 0.05
SPARC-207ENST00000537849 NUTM2BA6NNL0 878 aaPredicted RBP15.35■□□□□ 0.05
SPARC-207ENST00000537849 NUTM2EB1AL46 878 aaPredicted RBP15.35■□□□□ 0.05
SPARC-207ENST00000537849 EVA1CP58658 441 aa15.35■□□□□ 0.05
SPARC-207ENST00000537849 NUTM2AQ8IVF1 878 aaPredicted RBP15.35■□□□□ 0.05
SPARC-207ENST00000537849 GAS2L2Q8NHY3 880 aa15.35■□□□□ 0.05
SPARC-207ENST00000537849 CARD10Q9BWT7 1032 aa15.35■□□□□ 0.05
SPARC-207ENST00000537849 BTG4Q9NY30 223 aa15.35■□□□□ 0.05
SPARC-207ENST00000537849 IL16Q14005 1332 aa15.35■□□□□ 0.05
SPARC-207ENST00000537849 HTATSF1O43719 755 aaKnown RBP15.34■□□□□ 0.05
SPARC-207ENST00000537849 ADAMTS2O95450 1211 aa15.34■□□□□ 0.05
SPARC-207ENST00000537849 LARP1Q6PKG0 1096 aaKnown RBP15.34■□□□□ 0.05
SPARC-207ENST00000537849 LMOD3Q0VAK6 560 aa15.33■□□□□ 0.04
SPARC-207ENST00000537849 PLEKHO1Q53GL0 409 aaPredicted RBP15.33■□□□□ 0.04
SPARC-207ENST00000537849 DCTN1Q14203 1278 aa15.32■□□□□ 0.04
SPARC-207ENST00000537849 AMOTQ4VCS5 1084 aa15.32■□□□□ 0.04
SPARC-207ENST00000537849 TOM1L2Q6ZVM7 507 aa15.32■□□□□ 0.04
SPARC-207ENST00000537849 THUMPD2Q9BTF0 503 aaKnown RBP15.32■□□□□ 0.04
SPARC-207ENST00000537849 STRN4Q9NRL3 753 aa15.32■□□□□ 0.04
SPARC-207ENST00000537849 GNAT3A8MTJ3 354 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms