RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 MSTNO14793 375 aa8.15□□□□□ -1.1
YBX3-205ENST00000536107 AGERQ15109 404 aa8.15□□□□□ -1.1
YBX3-205ENST00000536107 EMILIN1Q9Y6C2 1016 aa8.15□□□□□ -1.1
YBX3-205ENST00000536107 LAMC3Q9Y6N6 1575 aa8.14□□□□□ -1.11
YBX3-205ENST00000536107 ITGA6P23229 1130 aa8.14□□□□□ -1.11
YBX3-205ENST00000536107 MAP10Q9P2G4 905 aa8.14□□□□□ -1.11
YBX3-205ENST00000536107 MAP4K5Q9Y4K4 846 aa8.14□□□□□ -1.11
YBX3-205ENST00000536107 FIGNL2A6NMB9 653 aa8.13□□□□□ -1.11
YBX3-205ENST00000536107 SSTR3P32745 418 aaPredicted RBP8.13□□□□□ -1.11
YBX3-205ENST00000536107 GJA5P36382 358 aa8.13□□□□□ -1.11
YBX3-205ENST00000536107 SV2AQ7L0J3 742 aa8.13□□□□□ -1.11
YBX3-205ENST00000536107 VWA5B2Q8N398 1253 aa8.13□□□□□ -1.11
YBX3-205ENST00000536107 C1QTNF2Q9BXJ5 285 aa8.13□□□□□ -1.11
YBX3-205ENST00000536107 KIF21AQ7Z4S6 1674 aa8.12□□□□□ -1.11
YBX3-205ENST00000536107 SPINT1O43278 529 aa8.12□□□□□ -1.11
YBX3-205ENST00000536107 FSHRP23945 695 aa8.12□□□□□ -1.11
YBX3-205ENST00000536107 PLA2G4EQ3MJ16 856 aa8.12□□□□□ -1.11
YBX3-205ENST00000536107 ADAMTS2O95450 1211 aa8.11□□□□□ -1.11
YBX3-205ENST00000536107 LYPD4Q6UWN0 246 aa8.11□□□□□ -1.11
YBX3-205ENST00000536107 CCDC116Q8IYX3 515 aa8.11□□□□□ -1.11
YBX3-205ENST00000536107 SPOCK3Q9BQ16 436 aa8.11□□□□□ -1.11
YBX3-205ENST00000536107 CDC14CA4D256 554 aa8.1□□□□□ -1.11
YBX3-205ENST00000536107 MAP3K10Q02779 954 aa8.1□□□□□ -1.11
YBX3-205ENST00000536107 VASH1Q7L8A9 365 aaPredicted RBP8.1□□□□□ -1.11
YBX3-205ENST00000536107 SH3RF1Q7Z6J0 888 aa8.1□□□□□ -1.11
YBX3-205ENST00000536107 TRMT44Q8IYL2 757 aaKnown RBP8.1□□□□□ -1.11
YBX3-205ENST00000536107 WDR62O43379 1518 aa8.09□□□□□ -1.11
YBX3-205ENST00000536107 HMGXB3Q12766 1538 aa8.09□□□□□ -1.11
YBX3-205ENST00000536107 CFAP99D6REC4 459 aa8.09□□□□□ -1.11
YBX3-205ENST00000536107 SRSF11Q05519 484 aaKnown RBP8.09□□□□□ -1.11
YBX3-205ENST00000536107 Q6ZVU0 165 aa8.09□□□□□ -1.11
YBX3-205ENST00000536107 DCAF5Q96JK2 942 aa8.09□□□□□ -1.11
YBX3-205ENST00000536107 BAZ1BQ9UIG0 1483 aaKnown RBP8.08□□□□□ -1.12
YBX3-205ENST00000536107 ENAMQ9NRM1 1142 aa8.08□□□□□ -1.12
YBX3-205ENST00000536107 PHF20L1A8MW92 1017 aa8.07□□□□□ -1.12
YBX3-205ENST00000536107 ITGB2P05107 769 aa8.07□□□□□ -1.12
YBX3-205ENST00000536107 CELA2BP08218 269 aaPredicted RBP8.07□□□□□ -1.12
YBX3-205ENST00000536107 ARMC2Q8NEN0 867 aa8.07□□□□□ -1.12
YBX3-205ENST00000536107 PROCP04070 461 aa8.06□□□□□ -1.12
YBX3-205ENST00000536107 PGPEP1Q9NXJ5 209 aa8.06□□□□□ -1.12
YBX3-205ENST00000536107 ARAP1Q96P48 1450 aa8.06□□□□□ -1.12
YBX3-205ENST00000536107 TULP1O00294 542 aaPredicted RBP8.05□□□□□ -1.12
YBX3-205ENST00000536107 CBLBQ13191 982 aa8.05□□□□□ -1.12
YBX3-205ENST00000536107 RSBN1LQ6PCB5 846 aaPredicted RBP8.05□□□□□ -1.12
YBX3-205ENST00000536107 CADPSQ9ULU8 1353 aa8.05□□□□□ -1.12
YBX3-205ENST00000536107 HRCP23327 699 aa8.04□□□□□ -1.12
YBX3-205ENST00000536107 DIXDC1Q155Q3 683 aa8.04□□□□□ -1.12
YBX3-205ENST00000536107 PPP1R26Q5T8A7 1209 aaPredicted RBP8.04□□□□□ -1.12
YBX3-205ENST00000536107 ZBTB3Q9H5J0 574 aa8.04□□□□□ -1.12
YBX3-205ENST00000536107 NBPF14Q5TI25 921 aa8.03□□□□□ -1.12
YBX3-205ENST00000536107 SH3BP5LQ7L8J4 393 aa8.03□□□□□ -1.12
YBX3-205ENST00000536107 PCDHB15Q9Y5E8 787 aa8.03□□□□□ -1.12
YBX3-205ENST00000536107 CNTNAP5Q8WYK1 1306 aa8.03□□□□□ -1.12
YBX3-205ENST00000536107 SENP3-EIF4A1A0A087X0R7 540 aa8.02□□□□□ -1.13
YBX3-205ENST00000536107 K7ELQ4 463 aaPredicted RBP8.02□□□□□ -1.13
YBX3-205ENST00000536107 PER1O15534 1290 aaPredicted RBP8.02□□□□□ -1.13
YBX3-205ENST00000536107 GAS6Q14393 721 aa8.02□□□□□ -1.13
YBX3-205ENST00000536107 PRPF38BQ5VTL8 546 aaKnown RBP8.02□□□□□ -1.13
YBX3-205ENST00000536107 BEND7Q8N7W2 519 aaPredicted RBP8.02□□□□□ -1.13
YBX3-205ENST00000536107 GALNT6Q8NCL4 622 aa8.02□□□□□ -1.13
YBX3-205ENST00000536107 PSMG3-AS1Q96PY0 264 aa8.02□□□□□ -1.13
YBX3-205ENST00000536107 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.01□□□□□ -1.13
YBX3-205ENST00000536107 CTSOP43234 321 aaPredicted RBP8.01□□□□□ -1.13
YBX3-205ENST00000536107 TBC1D2Q9BYX2 928 aa8.01□□□□□ -1.13
YBX3-205ENST00000536107 CEP164Q9UPV0 1460 aa8□□□□□ -1.13
YBX3-205ENST00000536107 MAGEB6P1A0A0J9YX57 407 aa8□□□□□ -1.13
YBX3-205ENST00000536107 Q8N3U1 123 aa8□□□□□ -1.13
YBX3-205ENST00000536107 BEGAINQ9BUH8 593 aa8□□□□□ -1.13
YBX3-205ENST00000536107 KRTAP9-2Q9BYQ4 174 aa8□□□□□ -1.13
YBX3-205ENST00000536107 TTLL12Q14166 644 aaPredicted RBP7.99□□□□□ -1.13
YBX3-205ENST00000536107 PODNQ7Z5L7 613 aa7.99□□□□□ -1.13
YBX3-205ENST00000536107 RNF217Q8TC41 542 aa7.99□□□□□ -1.13
YBX3-205ENST00000536107 ERFEQ4G0M1 354 aa7.98□□□□□ -1.13
YBX3-205ENST00000536107 GPKOWQ92917 476 aaPredicted RBP eCLIP7.98□□□□□ -1.13
YBX3-205ENST00000536107 INSM2Q96T92 566 aaPredicted RBP7.98□□□□□ -1.13
YBX3-205ENST00000536107 DHX9Q08211 1270 aaKnown RBP7.97□□□□□ -1.13
YBX3-205ENST00000536107 AMHR2Q16671 573 aa7.97□□□□□ -1.13
YBX3-205ENST00000536107 GIGYF2Q6Y7W6 1299 aaKnown RBP7.97□□□□□ -1.13
YBX3-205ENST00000536107 AGBL1Q96MI9 1066 aa7.97□□□□□ -1.13
YBX3-205ENST00000536107 RELBQ01201 579 aa7.96□□□□□ -1.14
YBX3-205ENST00000536107 CABLES1Q8TDN4 633 aa7.96□□□□□ -1.14
YBX3-205ENST00000536107 CARD14Q9BXL6 1004 aa7.96□□□□□ -1.14
YBX3-205ENST00000536107 POLMQ9NP87 494 aaPredicted RBP7.96□□□□□ -1.14
YBX3-205ENST00000536107 MBIPQ9NS73 344 aa7.96□□□□□ -1.14
YBX3-205ENST00000536107 CUEDC1Q9NWM3 386 aaPredicted RBP7.96□□□□□ -1.14
YBX3-205ENST00000536107 CDV3Q9UKY7 258 aaKnown RBP7.96□□□□□ -1.14
YBX3-205ENST00000536107 KRTAP9-6A0A140TA67 174 aa7.95□□□□□ -1.14
YBX3-205ENST00000536107 BCRP11274 1271 aa7.95□□□□□ -1.14
YBX3-205ENST00000536107 NEDD1Q8NHV4 660 aa7.95□□□□□ -1.14
YBX3-205ENST00000536107 FBXO41Q8TF61 875 aa7.95□□□□□ -1.14
YBX3-205ENST00000536107 LMTK3Q96Q04 1460 aa7.94□□□□□ -1.14
YBX3-205ENST00000536107 FANCD2Q9BXW9 1451 aa7.94□□□□□ -1.14
YBX3-205ENST00000536107 SMARCA4P51532 1647 aa7.94□□□□□ -1.14
YBX3-205ENST00000536107 RIC3Q7Z5B4 369 aa7.94□□□□□ -1.14
YBX3-205ENST00000536107 GMCL1Q96IK5 515 aa7.94□□□□□ -1.14
YBX3-205ENST00000536107 KCTD15Q96SI1 283 aaPredicted RBP7.94□□□□□ -1.14
YBX3-205ENST00000536107 LRRC4BQ9NT99 713 aa7.94□□□□□ -1.14
YBX3-205ENST00000536107 RSF1Q96T23 1441 aaPredicted RBP7.94□□□□□ -1.14
YBX3-205ENST00000536107 BAG6P46379 1132 aa7.93□□□□□ -1.14
YBX3-205ENST00000536107 IGF1RP08069 1367 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms