RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
CHD4-203ENST00000535717 MORC1Q86VD1 984 aa16.48■□□□□ 0.23
CHD4-203ENST00000535717 NPC1L1Q9UHC9 1359 aa16.48■□□□□ 0.23
CHD4-203ENST00000535717 TNNT2P45379 298 aaPredicted RBP16.47■□□□□ 0.23
CHD4-203ENST00000535717 TRPC5Q9UL62 973 aaPredicted RBP16.47■□□□□ 0.23
CHD4-203ENST00000535717 ABCC6O95255 1503 aa16.46■□□□□ 0.23
CHD4-203ENST00000535717 VPS72Q15906 364 aa16.46■□□□□ 0.23
CHD4-203ENST00000535717 STRN4Q9NRL3 753 aa16.46■□□□□ 0.23
CHD4-203ENST00000535717 AMPHP49418 695 aa16.45■□□□□ 0.22
CHD4-203ENST00000535717 EVA1CP58658 441 aa16.45■□□□□ 0.22
CHD4-203ENST00000535717 CNGB1Q14028 1251 aaPredicted RBP16.45■□□□□ 0.22
CHD4-203ENST00000535717 IP6K1Q92551 441 aa16.45■□□□□ 0.22
CHD4-203ENST00000535717 COL5A2P05997 1499 aaPredicted RBP16.45■□□□□ 0.22
CHD4-203ENST00000535717 RGPD5Q99666 1765 aa16.45■□□□□ 0.22
CHD4-203ENST00000535717 HOXC9P31274 260 aa16.44■□□□□ 0.22
CHD4-203ENST00000535717 POLKQ9UBT6 870 aa16.44■□□□□ 0.22
CHD4-203ENST00000535717 EMILIN1Q9Y6C2 1016 aa16.44■□□□□ 0.22
CHD4-203ENST00000535717 RTL1A6NKG5 1358 aa16.43■□□□□ 0.22
CHD4-203ENST00000535717 PEAK1Q9H792 1746 aa16.43■□□□□ 0.22
CHD4-203ENST00000535717 LARP1Q6PKG0 1096 aaKnown RBP16.43■□□□□ 0.22
CHD4-203ENST00000535717 GJD4Q96KN9 370 aaPredicted RBP16.43■□□□□ 0.22
CHD4-203ENST00000535717 MAP2P11137 1827 aaKnown RBP16.42■□□□□ 0.22
CHD4-203ENST00000535717 RXRBP28702 533 aa16.42■□□□□ 0.22
CHD4-203ENST00000535717 RBM6P78332 1123 aaKnown RBP16.42■□□□□ 0.22
CHD4-203ENST00000535717 CCDC9Q9Y3X0 531 aaKnown RBP16.42■□□□□ 0.22
CHD4-203ENST00000535717 BLMP54132 1417 aaPredicted RBP16.42■□□□□ 0.22
CHD4-203ENST00000535717 SPATA31A5Q5VU36 1347 aa16.42■□□□□ 0.22
CHD4-203ENST00000535717 SPATA31A7Q8IWB4 1347 aa16.42■□□□□ 0.22
CHD4-203ENST00000535717 KIF24Q5T7B8 1368 aa16.41■□□□□ 0.22
CHD4-203ENST00000535717 PPM1GO15355 546 aaPredicted RBP16.41■□□□□ 0.22
CHD4-203ENST00000535717 GLI3P10071 1580 aa16.41■□□□□ 0.22
CHD4-203ENST00000535717 WDR17Q8IZU2 1322 aa16.41■□□□□ 0.22
CHD4-203ENST00000535717 FLT4P35916 1363 aa16.4■□□□□ 0.22
CHD4-203ENST00000535717 HSP90AB2PQ58FF8 381 aa16.4■□□□□ 0.22
CHD4-203ENST00000535717 ANKRD24Q8TF21 1146 aa16.4■□□□□ 0.22
CHD4-203ENST00000535717 ERBB3P21860 1342 aa16.4■□□□□ 0.22
CHD4-203ENST00000535717 SPATA31A1Q5TZJ5 1347 aa16.4■□□□□ 0.22
CHD4-203ENST00000535717 CSB-PGBD3P0DP91 1061 aa16.39■□□□□ 0.21
CHD4-203ENST00000535717 LTV1Q96GA3 475 aaPredicted RBP16.39■□□□□ 0.21
CHD4-203ENST00000535717 INSRP06213 1382 aa16.38■□□□□ 0.21
CHD4-203ENST00000535717 CRB1P82279 1406 aa16.38■□□□□ 0.21
CHD4-203ENST00000535717 SMG6Q86US8 1419 aaKnown RBP16.38■□□□□ 0.21
CHD4-203ENST00000535717 TOM1L2Q6ZVM7 507 aa16.38■□□□□ 0.21
CHD4-203ENST00000535717 ILDR2Q71H61 639 aa16.37■□□□□ 0.21
CHD4-203ENST00000535717 USP35Q9P2H5 1018 aa16.37■□□□□ 0.21
CHD4-203ENST00000535717 CARD10Q9BWT7 1032 aa16.36■□□□□ 0.21
CHD4-203ENST00000535717 ONECUT3O60422 494 aaPredicted RBP16.35■□□□□ 0.21
CHD4-203ENST00000535717 MTHFSP49914 203 aa16.35■□□□□ 0.21
CHD4-203ENST00000535717 FAM98CQ17RN3 349 aaKnown RBP16.35■□□□□ 0.21
CHD4-203ENST00000535717 TCP11L2Q8N4U5 519 aa16.35■□□□□ 0.21
CHD4-203ENST00000535717 NLRP2Q9NX02 1062 aa16.35■□□□□ 0.21
CHD4-203ENST00000535717 PARD3Q8TEW0 1356 aa16.35■□□□□ 0.21
CHD4-203ENST00000535717 RGS12O14924 1447 aa16.35■□□□□ 0.21
CHD4-203ENST00000535717 CDK12Q9NYV4 1490 aaPredicted RBP16.35■□□□□ 0.21
CHD4-203ENST00000535717 PPP2R1AP30153 589 aa16.33■□□□□ 0.2
CHD4-203ENST00000535717 BARGINQ6ZT62 677 aa16.33■□□□□ 0.2
CHD4-203ENST00000535717 THRAP3Q9Y2W1 955 aaKnown RBP16.33■□□□□ 0.2
CHD4-203ENST00000535717 FAM208AQ9UK61 1670 aaKnown RBP16.33■□□□□ 0.2
CHD4-203ENST00000535717 RGPD2P0DJD1 1756 aa16.32■□□□□ 0.2
CHD4-203ENST00000535717 EIF4A2Q14240 407 aaKnown RBP16.32■□□□□ 0.2
CHD4-203ENST00000535717 NBPF6Q5VWK0 638 aa16.32■□□□□ 0.2
CHD4-203ENST00000535717 SEPT12Q8IYM1 358 aa16.32■□□□□ 0.2
CHD4-203ENST00000535717 NBPF4Q96M43 638 aa16.32■□□□□ 0.2
CHD4-203ENST00000535717 THSD7AQ9UPZ6 1657 aa16.3■□□□□ 0.2
CHD4-203ENST00000535717 RALBP1Q15311 655 aa16.3■□□□□ 0.2
CHD4-203ENST00000535717 A0A0G2JS52 829 aa16.29■□□□□ 0.2
CHD4-203ENST00000535717 MYT1Q01538 1121 aa16.29■□□□□ 0.2
CHD4-203ENST00000535717 USHBP1Q8N6Y0 703 aa16.29■□□□□ 0.2
CHD4-203ENST00000535717 DISP2A7MBM2 1401 aa16.28■□□□□ 0.2
CHD4-203ENST00000535717 EYA1Q99502 592 aa16.28■□□□□ 0.2
CHD4-203ENST00000535717 COL3A1P02461 1466 aaPredicted RBP16.28■□□□□ 0.2
CHD4-203ENST00000535717 BRWD3Q6RI45 1802 aa16.27■□□□□ 0.2
CHD4-203ENST00000535717 WNK3Q9BYP7 1800 aa16.27■□□□□ 0.2
CHD4-203ENST00000535717 IL13P35225 146 aa16.27■□□□□ 0.2
CHD4-203ENST00000535717 PRKRIP1Q9H875 184 aaPredicted RBP16.27■□□□□ 0.2
CHD4-203ENST00000535717 IL2RBP14784 551 aa16.26■□□□□ 0.19
CHD4-203ENST00000535717 CDCA7Q9BWT1 371 aaPredicted RBP16.26■□□□□ 0.19
CHD4-203ENST00000535717 NCAPD2Q15021 1401 aa16.26■□□□□ 0.19
CHD4-203ENST00000535717 PARP4Q9UKK3 1724 aaKnown RBP16.25■□□□□ 0.19
CHD4-203ENST00000535717 IGSF1Q8N6C5 1336 aa16.25■□□□□ 0.19
CHD4-203ENST00000535717 DIAPH1O60610 1272 aaKnown RBP16.25■□□□□ 0.19
CHD4-203ENST00000535717 MYBBP1AQ9BQG0 1328 aaKnown RBP16.24■□□□□ 0.19
CHD4-203ENST00000535717 CFAP53Q96M91 514 aa16.24■□□□□ 0.19
CHD4-203ENST00000535717 LRRC37A3O60309 1634 aa16.23■□□□□ 0.19
CHD4-203ENST00000535717 RGPD1P0DJD0 1748 aa16.23■□□□□ 0.19
CHD4-203ENST00000535717 DDB1Q16531 1140 aa16.23■□□□□ 0.19
CHD4-203ENST00000535717 KRT27Q7Z3Y8 459 aa16.23■□□□□ 0.19
CHD4-203ENST00000535717 MEGF6O75095 1541 aa16.23■□□□□ 0.19
CHD4-203ENST00000535717 EP400Q96L91 3159 aa16.23■□□□□ 0.19
CHD4-203ENST00000535717 RAPGEF4Q8WZA2 1011 aa16.22■□□□□ 0.19
CHD4-203ENST00000535717 EXOC5O00471 708 aa16.21■□□□□ 0.19
CHD4-203ENST00000535717 PDE3BQ13370 1112 aa16.21■□□□□ 0.19
CHD4-203ENST00000535717 AEBP1Q8IUX7 1158 aa16.21■□□□□ 0.19
CHD4-203ENST00000535717 OVOS2A0A0G2JMS6 1433 aa16.2■□□□□ 0.18
CHD4-203ENST00000535717 TNS2Q63HR2 1409 aa16.2■□□□□ 0.18
CHD4-203ENST00000535717 TATP17735 454 aaPredicted RBP16.2■□□□□ 0.18
CHD4-203ENST00000535717 FAM182BQ5T319 152 aa16.2■□□□□ 0.18
CHD4-203ENST00000535717 SULT6B1Q6IMI4 303 aa16.2■□□□□ 0.18
CHD4-203ENST00000535717 KDRP35968 1356 aa16.19■□□□□ 0.18
CHD4-203ENST00000535717 U2SURPO15042 1029 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms