RNA–Protein interactions for RNA: ENST00000535645.1

C2CD3-208, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-208ENST00000535645 KIF24Q5T7B8 1368 aa9.73□□□□□ -0.85
C2CD3-208ENST00000535645 COL22A1Q8NFW1 1626 aaPredicted RBP9.72□□□□□ -0.85
C2CD3-208ENST00000535645 PHRF1Q9P1Y6 1649 aaKnown RBP9.72□□□□□ -0.85
C2CD3-208ENST00000535645 DIAPH1O60610 1272 aaKnown RBP9.72□□□□□ -0.85
C2CD3-208ENST00000535645 HSP90AB2PQ58FF8 381 aa9.72□□□□□ -0.85
C2CD3-208ENST00000535645 STRN4Q9NRL3 753 aa9.72□□□□□ -0.85
C2CD3-208ENST00000535645 RTL1A6NKG5 1358 aa9.72□□□□□ -0.85
C2CD3-208ENST00000535645 CCER2I3L3R5 266 aa9.71□□□□□ -0.86
C2CD3-208ENST00000535645 U2SURPO15042 1029 aaKnown RBP9.71□□□□□ -0.86
C2CD3-208ENST00000535645 WDR43Q15061 677 aaKnown RBP eCLIP9.71□□□□□ -0.86
C2CD3-208ENST00000535645 ANKRD24Q8TF21 1146 aa9.71□□□□□ -0.86
C2CD3-208ENST00000535645 BTG4Q9NY30 223 aa9.71□□□□□ -0.86
C2CD3-208ENST00000535645 SMG6Q86US8 1419 aaKnown RBP9.71□□□□□ -0.86
C2CD3-208ENST00000535645 NFAT5O94916 1531 aa9.71□□□□□ -0.86
C2CD3-208ENST00000535645 MARF1Q9Y4F3 1742 aaKnown RBP9.7□□□□□ -0.86
C2CD3-208ENST00000535645 NLRP2Q9NX02 1062 aa9.7□□□□□ -0.86
C2CD3-208ENST00000535645 CCDC9Q9Y3X0 531 aaKnown RBP9.7□□□□□ -0.86
C2CD3-208ENST00000535645 INSRP06213 1382 aa9.7□□□□□ -0.86
C2CD3-208ENST00000535645 LTN1O94822 1766 aa9.7□□□□□ -0.86
C2CD3-208ENST00000535645 NEFMP07197 916 aa9.69□□□□□ -0.86
C2CD3-208ENST00000535645 BLMP54132 1417 aaPredicted RBP9.69□□□□□ -0.86
C2CD3-208ENST00000535645 TOM1L2Q6ZVM7 507 aa9.69□□□□□ -0.86
C2CD3-208ENST00000535645 AXIN2Q9Y2T1 843 aa9.69□□□□□ -0.86
C2CD3-208ENST00000535645 ABCA3Q99758 1704 aa9.68□□□□□ -0.86
C2CD3-208ENST00000535645 CRYBG1Q9Y4K1 1723 aa9.68□□□□□ -0.86
C2CD3-208ENST00000535645 CDK12Q9NYV4 1490 aaPredicted RBP9.68□□□□□ -0.86
C2CD3-208ENST00000535645 U2AF1L5P0DN76 240 aaPredicted RBP9.68□□□□□ -0.86
C2CD3-208ENST00000535645 U2AF1Q01081 240 aaKnown RBP eCLIP9.68□□□□□ -0.86
C2CD3-208ENST00000535645 EIF4A2Q14240 407 aaKnown RBP9.68□□□□□ -0.86
C2CD3-208ENST00000535645 PHF23Q9BUL5 403 aaPredicted RBP9.68□□□□□ -0.86
C2CD3-208ENST00000535645 USP21Q9UK80 565 aa9.68□□□□□ -0.86
C2CD3-208ENST00000535645 COL14A1Q05707 1796 aaKnown RBP9.68□□□□□ -0.86
C2CD3-208ENST00000535645 ERBB3P21860 1342 aa9.67□□□□□ -0.86
C2CD3-208ENST00000535645 UNC5CLQ8IV45 518 aa9.67□□□□□ -0.86
C2CD3-208ENST00000535645 FAM9BQ8IZU0 186 aa9.67□□□□□ -0.86
C2CD3-208ENST00000535645 PNNQ9H307 717 aaKnown RBP9.67□□□□□ -0.86
C2CD3-208ENST00000535645 AFF2P51816 1311 aa9.66□□□□□ -0.86
C2CD3-208ENST00000535645 WDR17Q8IZU2 1322 aa9.66□□□□□ -0.86
C2CD3-208ENST00000535645 IL13P35225 146 aa9.66□□□□□ -0.86
C2CD3-208ENST00000535645 CCDC184Q52MB2 194 aa9.66□□□□□ -0.86
C2CD3-208ENST00000535645 FNBP4Q8N3X1 1017 aaPredicted RBP9.66□□□□□ -0.86
C2CD3-208ENST00000535645 EYA1Q99502 592 aa9.66□□□□□ -0.86
C2CD3-208ENST00000535645 USP35Q9P2H5 1018 aa9.66□□□□□ -0.86
C2CD3-208ENST00000535645 LRP6O75581 1613 aa9.66□□□□□ -0.86
C2CD3-208ENST00000535645 ABCC6O95255 1503 aa9.66□□□□□ -0.86
C2CD3-208ENST00000535645 RGPD5Q99666 1765 aa9.65□□□□□ -0.86
C2CD3-208ENST00000535645 CAMTA1Q9Y6Y1 1673 aa9.65□□□□□ -0.86
C2CD3-208ENST00000535645 HMOX1P09601 288 aa9.65□□□□□ -0.86
C2CD3-208ENST00000535645 ZNF772Q68DY9 489 aaPredicted RBP9.65□□□□□ -0.86
C2CD3-208ENST00000535645 SULT6B1Q6IMI4 303 aa9.65□□□□□ -0.86
C2CD3-208ENST00000535645 LARP1Q6PKG0 1096 aaKnown RBP9.65□□□□□ -0.86
C2CD3-208ENST00000535645 RAPGEF4Q8WZA2 1011 aa9.65□□□□□ -0.86
C2CD3-208ENST00000535645 CARD10Q9BWT7 1032 aa9.65□□□□□ -0.86
C2CD3-208ENST00000535645 TRPC5Q9UL62 973 aaPredicted RBP9.65□□□□□ -0.86
C2CD3-208ENST00000535645 PEAK1Q9H792 1746 aa9.65□□□□□ -0.87
C2CD3-208ENST00000535645 NBPF6Q5VWK0 638 aa9.64□□□□□ -0.87
C2CD3-208ENST00000535645 USHBP1Q8N6Y0 703 aa9.64□□□□□ -0.87
C2CD3-208ENST00000535645 PNISRQ8TF01 805 aaKnown RBP9.64□□□□□ -0.87
C2CD3-208ENST00000535645 NBPF4Q96M43 638 aa9.64□□□□□ -0.87
C2CD3-208ENST00000535645 QTRT2Q9H974 415 aaKnown RBP9.64□□□□□ -0.87
C2CD3-208ENST00000535645 COL18A1P39060 1754 aa9.64□□□□□ -0.87
C2CD3-208ENST00000535645 COL5A2P05997 1499 aaPredicted RBP9.64□□□□□ -0.87
C2CD3-208ENST00000535645 SLIT2O94813 1529 aa9.63□□□□□ -0.87
C2CD3-208ENST00000535645 A0A0G2JS52 829 aa9.63□□□□□ -0.87
C2CD3-208ENST00000535645 FCHSD2O94868 740 aa9.63□□□□□ -0.87
C2CD3-208ENST00000535645 TATP17735 454 aaPredicted RBP9.63□□□□□ -0.87
C2CD3-208ENST00000535645 MYT1Q01538 1121 aa9.63□□□□□ -0.87
C2CD3-208ENST00000535645 VPS72Q15906 364 aa9.63□□□□□ -0.87
C2CD3-208ENST00000535645 TCP11L2Q8N4U5 519 aa9.63□□□□□ -0.87
C2CD3-208ENST00000535645 ADAMTS8Q9UP79 889 aa9.63□□□□□ -0.87
C2CD3-208ENST00000535645 CRB1P82279 1406 aa9.63□□□□□ -0.87
C2CD3-208ENST00000535645 IGSF1Q8N6C5 1336 aa9.62□□□□□ -0.87
C2CD3-208ENST00000535645 MAPK8IP3Q9UPT6 1336 aa9.62□□□□□ -0.87
C2CD3-208ENST00000535645 PLCH1Q4KWH8 1693 aa9.62□□□□□ -0.87
C2CD3-208ENST00000535645 LMO7Q8WWI1 1683 aa9.62□□□□□ -0.87
C2CD3-208ENST00000535645 THRAP3Q9Y2W1 955 aaKnown RBP9.62□□□□□ -0.87
C2CD3-208ENST00000535645 NWD2Q9ULI1 1742 aa9.62□□□□□ -0.87
C2CD3-208ENST00000535645 SPATA31A5Q5VU36 1347 aa9.61□□□□□ -0.87
C2CD3-208ENST00000535645 SPATA31A7Q8IWB4 1347 aa9.61□□□□□ -0.87
C2CD3-208ENST00000535645 COL3A1P02461 1466 aaPredicted RBP9.61□□□□□ -0.87
C2CD3-208ENST00000535645 IL2RBP14784 551 aa9.61□□□□□ -0.87
C2CD3-208ENST00000535645 PRKAR2BP31323 418 aa9.61□□□□□ -0.87
C2CD3-208ENST00000535645 RUNDC1Q96C34 613 aa9.61□□□□□ -0.87
C2CD3-208ENST00000535645 GJD4Q96KN9 370 aaPredicted RBP9.61□□□□□ -0.87
C2CD3-208ENST00000535645 CDCA7Q9BWT1 371 aaPredicted RBP9.61□□□□□ -0.87
C2CD3-208ENST00000535645 BCL9LQ86UU0 1499 aa9.6□□□□□ -0.87
C2CD3-208ENST00000535645 SPATA31A1Q5TZJ5 1347 aa9.6□□□□□ -0.87
C2CD3-208ENST00000535645 PLEKHO1Q53GL0 409 aaPredicted RBP9.6□□□□□ -0.87
C2CD3-208ENST00000535645 AEBP1Q8IUX7 1158 aa9.6□□□□□ -0.87
C2CD3-208ENST00000535645 SPG7Q9UQ90 795 aa9.6□□□□□ -0.87
C2CD3-208ENST00000535645 FAM208AQ9UK61 1670 aaKnown RBP9.6□□□□□ -0.87
C2CD3-208ENST00000535645 EXOC5O00471 708 aa9.59□□□□□ -0.87
C2CD3-208ENST00000535645 RXRBP28702 533 aa9.59□□□□□ -0.87
C2CD3-208ENST00000535645 RBM6P78332 1123 aaKnown RBP9.59□□□□□ -0.87
C2CD3-208ENST00000535645 FAM98CQ17RN3 349 aaKnown RBP9.59□□□□□ -0.87
C2CD3-208ENST00000535645 AMOTQ4VCS5 1084 aa9.59□□□□□ -0.87
C2CD3-208ENST00000535645 CCDC146Q8IYE0 955 aa9.59□□□□□ -0.87
C2CD3-208ENST00000535645 RSPH6AQ9H0K4 717 aa9.59□□□□□ -0.87
C2CD3-208ENST00000535645 RGPD2P0DJD1 1756 aa9.58□□□□□ -0.88
C2CD3-208ENST00000535645 C1orf141Q5JVX7 400 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms