RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 LINC01559Q495D7 138 aa3.23□□□□□ -1.89
COPB1-212ENST00000534771 RDH13Q8NBN7 331 aa3.23□□□□□ -1.89
COPB1-212ENST00000534771 EDARADDQ8WWZ3 215 aa3.23□□□□□ -1.89
COPB1-212ENST00000534771 USB1Q9BQ65 265 aaKnown RBP3.23□□□□□ -1.89
COPB1-212ENST00000534771 PCMTD2Q9NV79 361 aa3.23□□□□□ -1.89
COPB1-212ENST00000534771 NOP53Q9NZM5 478 aaKnown RBP3.23□□□□□ -1.89
COPB1-212ENST00000534771 ADGRG1Q9Y653 693 aa3.23□□□□□ -1.89
COPB1-212ENST00000534771 SPDYE16A6NNV3 312 aaPredicted RBP3.22□□□□□ -1.89
COPB1-212ENST00000534771 PRRG2O14669 202 aa3.22□□□□□ -1.89
COPB1-212ENST00000534771 ZNF865P0CJ78 1059 aaPredicted RBP3.22□□□□□ -1.89
COPB1-212ENST00000534771 MX2P20592 715 aa3.22□□□□□ -1.89
COPB1-212ENST00000534771 GIGYF2Q6Y7W6 1299 aaKnown RBP3.22□□□□□ -1.89
COPB1-212ENST00000534771 NSFL1CQ9UNZ2 370 aaKnown RBP3.22□□□□□ -1.89
COPB1-212ENST00000534771 Q3C1V9 767 aa3.21□□□□□ -1.9
COPB1-212ENST00000534771 CADPS2Q86UW7 1296 aa3.21□□□□□ -1.9
COPB1-212ENST00000534771 BAP1Q92560 729 aa3.21□□□□□ -1.9
COPB1-212ENST00000534771 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.2□□□□□ -1.9
COPB1-212ENST00000534771 JAG2Q9Y219 1238 aa3.2□□□□□ -1.9
COPB1-212ENST00000534771 OAS3Q9Y6K5 1087 aaKnown RBP3.2□□□□□ -1.9
COPB1-212ENST00000534771 NCANO14594 1321 aa3.19□□□□□ -1.9
COPB1-212ENST00000534771 DCAF8L2P0C7V8 631 aa3.19□□□□□ -1.9
COPB1-212ENST00000534771 BUD31P41223 144 aaPredicted RBP3.19□□□□□ -1.9
COPB1-212ENST00000534771 NR5A1Q13285 461 aa3.19□□□□□ -1.9
COPB1-212ENST00000534771 OGFOD2Q6N063 350 aa3.19□□□□□ -1.9
COPB1-212ENST00000534771 SPOCD1Q6ZMY3 1216 aa3.19□□□□□ -1.9
COPB1-212ENST00000534771 ZNF837Q96EG3 531 aaPredicted RBP3.19□□□□□ -1.9
COPB1-212ENST00000534771 SPINT1O43278 529 aa3.18□□□□□ -1.9
COPB1-212ENST00000534771 H2AFB1P0C5Y9 115 aa3.18□□□□□ -1.9
COPB1-212ENST00000534771 H2AFB2P0C5Z0 115 aa3.18□□□□□ -1.9
COPB1-212ENST00000534771 CTSOP43234 321 aaPredicted RBP3.18□□□□□ -1.9
COPB1-212ENST00000534771 GTPBP3Q969Y2 492 aaKnown RBP3.18□□□□□ -1.9
COPB1-212ENST00000534771 TRIM52Q96A61 297 aa3.18□□□□□ -1.9
COPB1-212ENST00000534771 RNF112Q9ULX5 631 aa3.18□□□□□ -1.9
COPB1-212ENST00000534771 B8ZZF3 427 aa3.17□□□□□ -1.9
COPB1-212ENST00000534771 GCGRP47871 477 aa3.17□□□□□ -1.9
COPB1-212ENST00000534771 DBN1Q16643 649 aa3.17□□□□□ -1.9
COPB1-212ENST00000534771 FAM174AQ8TBP5 190 aa3.17□□□□□ -1.9
COPB1-212ENST00000534771 CDK15Q96Q40 435 aa3.17□□□□□ -1.9
COPB1-212ENST00000534771 NUDT12Q9BQG2 462 aa3.17□□□□□ -1.9
COPB1-212ENST00000534771 GRIPAP1Q4V328 841 aa3.16□□□□□ -1.9
COPB1-212ENST00000534771 TRIM22Q8IYM9 498 aa3.16□□□□□ -1.9
COPB1-212ENST00000534771 BTBD6Q96KE9 485 aa3.16□□□□□ -1.9
COPB1-212ENST00000534771 TRERF1Q96PN7 1200 aa3.16□□□□□ -1.9
COPB1-212ENST00000534771 FCHSD2O94868 740 aa3.15□□□□□ -1.91
COPB1-212ENST00000534771 SPATA31C1P0DKV0 1188 aa3.15□□□□□ -1.91
COPB1-212ENST00000534771 SSTR4P31391 388 aa3.15□□□□□ -1.91
COPB1-212ENST00000534771 GRM5P41594 1212 aa3.15□□□□□ -1.91
COPB1-212ENST00000534771 MAP2K3P46734 347 aa3.15□□□□□ -1.91
COPB1-212ENST00000534771 RIPOR1Q6ZS17 1223 aa3.15□□□□□ -1.91
COPB1-212ENST00000534771 KLRG1Q96E93 195 aa3.15□□□□□ -1.91
COPB1-212ENST00000534771 DDX11L8A8MPP1 907 aa3.14□□□□□ -1.91
COPB1-212ENST00000534771 APBA3O96018 575 aa3.14□□□□□ -1.91
COPB1-212ENST00000534771 E2F4Q16254 413 aa3.14□□□□□ -1.91
COPB1-212ENST00000534771 ZNF511Q8NB15 262 aa3.14□□□□□ -1.91
COPB1-212ENST00000534771 GMCL1Q96IK5 515 aa3.14□□□□□ -1.91
COPB1-212ENST00000534771 JUNDP17535 347 aa3.13□□□□□ -1.91
COPB1-212ENST00000534771 GP2P55259 537 aaKnown RBP3.13□□□□□ -1.91
COPB1-212ENST00000534771 CBLBQ13191 982 aa3.13□□□□□ -1.91
COPB1-212ENST00000534771 LILRA6Q6PI73 481 aa3.13□□□□□ -1.91
COPB1-212ENST00000534771 INSM2Q96T92 566 aaPredicted RBP3.13□□□□□ -1.91
COPB1-212ENST00000534771 PLVAPQ9BX97 442 aa3.13□□□□□ -1.91
COPB1-212ENST00000534771 POLMQ9NP87 494 aaPredicted RBP3.13□□□□□ -1.91
COPB1-212ENST00000534771 WDR70Q9NW82 654 aa3.13□□□□□ -1.91
COPB1-212ENST00000534771 DGKGP49619 791 aa3.12□□□□□ -1.91
COPB1-212ENST00000534771 BBXQ8WY36 941 aaPredicted RBP3.12□□□□□ -1.91
COPB1-212ENST00000534771 UNC93B1Q9H1C4 597 aa3.12□□□□□ -1.91
COPB1-212ENST00000534771 GDF2Q9UK05 429 aaPredicted RBP3.12□□□□□ -1.91
COPB1-212ENST00000534771 PRPF38BQ5VTL8 546 aaKnown RBP3.11□□□□□ -1.91
COPB1-212ENST00000534771 POU5F2Q8N7G0 328 aa3.11□□□□□ -1.91
COPB1-212ENST00000534771 SPRYD3Q8NCJ5 442 aa3.11□□□□□ -1.91
COPB1-212ENST00000534771 RNF217Q8TC41 542 aa3.11□□□□□ -1.91
COPB1-212ENST00000534771 CSRNP1Q96S65 589 aa3.11□□□□□ -1.91
COPB1-212ENST00000534771 ARIH1Q9Y4X5 557 aaPredicted RBP3.11□□□□□ -1.91
COPB1-212ENST00000534771 GOLGA6L1Q8N7Z2 621 aa3.1□□□□□ -1.91
COPB1-212ENST00000534771 TRIM11Q96F44 468 aa3.1□□□□□ -1.91
COPB1-212ENST00000534771 AGBL1Q96MI9 1066 aa3.1□□□□□ -1.91
COPB1-212ENST00000534771 PXYLP1Q8TE99 480 aa3.09□□□□□ -1.91
COPB1-212ENST00000534771 EMILIN1Q9Y6C2 1016 aa3.09□□□□□ -1.91
COPB1-212ENST00000534771 H7C1W4 665 aa3.08□□□□□ -1.92
COPB1-212ENST00000534771 RHOQP17081 205 aa3.08□□□□□ -1.92
COPB1-212ENST00000534771 RELBQ01201 579 aa3.08□□□□□ -1.92
COPB1-212ENST00000534771 TP53INP1Q96A56 240 aa3.08□□□□□ -1.92
COPB1-212ENST00000534771 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.08□□□□□ -1.92
COPB1-212ENST00000534771 DAXXQ9UER7 740 aaPredicted RBP3.08□□□□□ -1.92
COPB1-212ENST00000534771 GGA1Q9UJY5 639 aa3.08□□□□□ -1.92
COPB1-212ENST00000534771 DBX1A6NMT0 343 aa3.07□□□□□ -1.92
COPB1-212ENST00000534771 CCNYL3P0C7X3 344 aa3.07□□□□□ -1.92
COPB1-212ENST00000534771 PTGDRQ13258 359 aa3.07□□□□□ -1.92
COPB1-212ENST00000534771 Q6ZVU0 165 aa3.07□□□□□ -1.92
COPB1-212ENST00000534771 FOXJ1Q92949 421 aa3.07□□□□□ -1.92
COPB1-212ENST00000534771 ZNF395Q9H8N7 513 aaPredicted RBP3.07□□□□□ -1.92
COPB1-212ENST00000534771 OATP04181 439 aa3.06□□□□□ -1.92
COPB1-212ENST00000534771 EPXP11678 715 aa3.06□□□□□ -1.92
COPB1-212ENST00000534771 ZNF124Q15973 351 aa3.06□□□□□ -1.92
COPB1-212ENST00000534771 PRRT3Q5FWE3 981 aa3.06□□□□□ -1.92
COPB1-212ENST00000534771 LYSMD3Q7Z3D4 306 aa3.06□□□□□ -1.92
COPB1-212ENST00000534771 SYMPKQ92797 1274 aaKnown RBP3.06□□□□□ -1.92
COPB1-212ENST00000534771 GAS2L1Q99501 681 aaPredicted RBP3.06□□□□□ -1.92
COPB1-212ENST00000534771 EVA1BQ9NVM1 165 aa3.06□□□□□ -1.92
COPB1-212ENST00000534771 FSHRP23945 695 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms