RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 ARHGEF25Q86VW2 580 aa19.34■□□□□ 0.69
VPS11-205ENST00000534551 KCNH5Q8NCM2 988 aa19.34■□□□□ 0.69
VPS11-205ENST00000534551 AATKQ6ZMQ8 1374 aa19.33■□□□□ 0.69
VPS11-205ENST00000534551 CGNL1Q0VF96 1302 aa19.33■□□□□ 0.69
VPS11-205ENST00000534551 AXIN2Q9Y2T1 843 aa19.32■□□□□ 0.68
VPS11-205ENST00000534551 THSD7AQ9UPZ6 1657 aa19.32■□□□□ 0.68
VPS11-205ENST00000534551 RRS1Q15050 365 aaKnown RBP19.31■□□□□ 0.68
VPS11-205ENST00000534551 CCDC9Q9Y3X0 531 aaKnown RBP19.31■□□□□ 0.68
VPS11-205ENST00000534551 MAP3K19Q56UN5 1328 aa19.3■□□□□ 0.68
VPS11-205ENST00000534551 RXRBP28702 533 aa19.3■□□□□ 0.68
VPS11-205ENST00000534551 VPS72Q15906 364 aa19.3■□□□□ 0.68
VPS11-205ENST00000534551 FAM208AQ9UK61 1670 aaKnown RBP19.3■□□□□ 0.68
VPS11-205ENST00000534551 CDK12Q9NYV4 1490 aaPredicted RBP19.29■□□□□ 0.68
VPS11-205ENST00000534551 RBM6P78332 1123 aaKnown RBP19.29■□□□□ 0.68
VPS11-205ENST00000534551 LARP1Q6PKG0 1096 aaKnown RBP19.29■□□□□ 0.68
VPS11-205ENST00000534551 GJD4Q96KN9 370 aaPredicted RBP19.29■□□□□ 0.68
VPS11-205ENST00000534551 TNNT2P45379 298 aaPredicted RBP19.27■□□□□ 0.68
VPS11-205ENST00000534551 CNGB1Q14028 1251 aaPredicted RBP19.27■□□□□ 0.68
VPS11-205ENST00000534551 AMER1Q5JTC6 1135 aaPredicted RBP19.27■□□□□ 0.68
VPS11-205ENST00000534551 SPATA31A5Q5VU36 1347 aa19.26■□□□□ 0.67
VPS11-205ENST00000534551 SPATA31A7Q8IWB4 1347 aa19.26■□□□□ 0.67
VPS11-205ENST00000534551 LRRC37A3O60309 1634 aa19.26■□□□□ 0.67
VPS11-205ENST00000534551 USP35Q9P2H5 1018 aa19.26■□□□□ 0.67
VPS11-205ENST00000534551 EP400Q96L91 3159 aa19.26■□□□□ 0.67
VPS11-205ENST00000534551 NSD2O96028 1365 aa19.26■□□□□ 0.67
VPS11-205ENST00000534551 PER1O15534 1290 aaPredicted RBP19.25■□□□□ 0.67
VPS11-205ENST00000534551 EVA1CP58658 441 aa19.25■□□□□ 0.67
VPS11-205ENST00000534551 KNSTRNQ9Y448 316 aa19.25■□□□□ 0.67
VPS11-205ENST00000534551 PARP4Q9UKK3 1724 aaKnown RBP19.25■□□□□ 0.67
VPS11-205ENST00000534551 CRB1P82279 1406 aa19.25■□□□□ 0.67
VPS11-205ENST00000534551 SPATA31A1Q5TZJ5 1347 aa19.25■□□□□ 0.67
VPS11-205ENST00000534551 FAM98CQ17RN3 349 aaKnown RBP19.24■□□□□ 0.67
VPS11-205ENST00000534551 EMILIN1Q9Y6C2 1016 aa19.24■□□□□ 0.67
VPS11-205ENST00000534551 BLMP54132 1417 aaPredicted RBP19.24■□□□□ 0.67
VPS11-205ENST00000534551 RTL1A6NKG5 1358 aa19.23■□□□□ 0.67
VPS11-205ENST00000534551 HOXC9P31274 260 aa19.23■□□□□ 0.67
VPS11-205ENST00000534551 CC2D1BQ5T0F9 858 aaKnown RBP19.23■□□□□ 0.67
VPS11-205ENST00000534551 ERBB3P21860 1342 aa19.23■□□□□ 0.67
VPS11-205ENST00000534551 WDR17Q8IZU2 1322 aa19.23■□□□□ 0.67
VPS11-205ENST00000534551 LTV1Q96GA3 475 aaPredicted RBP19.22■□□□□ 0.67
VPS11-205ENST00000534551 AMPHP49418 695 aa19.21■□□□□ 0.67
VPS11-205ENST00000534551 SMG6Q86US8 1419 aaKnown RBP19.2■□□□□ 0.66
VPS11-205ENST00000534551 A0A0G2JS52 829 aa19.2■□□□□ 0.66
VPS11-205ENST00000534551 CSB-PGBD3P0DP91 1061 aa19.2■□□□□ 0.66
VPS11-205ENST00000534551 MYT1Q01538 1121 aa19.2■□□□□ 0.66
VPS11-205ENST00000534551 TOM1L2Q6ZVM7 507 aa19.2■□□□□ 0.66
VPS11-205ENST00000534551 ANKRD24Q8TF21 1146 aa19.2■□□□□ 0.66
VPS11-205ENST00000534551 IP6K1Q92551 441 aa19.2■□□□□ 0.66
VPS11-205ENST00000534551 FLT4P35916 1363 aa19.19■□□□□ 0.66
VPS11-205ENST00000534551 SHANK3Q9BYB0 1731 aa19.18■□□□□ 0.66
VPS11-205ENST00000534551 PPM1GO15355 546 aaPredicted RBP19.18■□□□□ 0.66
VPS11-205ENST00000534551 HSP90AB2PQ58FF8 381 aa19.18■□□□□ 0.66
VPS11-205ENST00000534551 MORC1Q86VD1 984 aa19.18■□□□□ 0.66
VPS11-205ENST00000534551 SEPT12Q8IYM1 358 aa19.17■□□□□ 0.66
VPS11-205ENST00000534551 DISP2A7MBM2 1401 aa19.17■□□□□ 0.66
VPS11-205ENST00000534551 TCP11L2Q8N4U5 519 aa19.16■□□□□ 0.66
VPS11-205ENST00000534551 POLKQ9UBT6 870 aa19.16■□□□□ 0.66
VPS11-205ENST00000534551 DDX10Q13206 875 aaKnown RBP19.15■□□□□ 0.66
VPS11-205ENST00000534551 INSRP06213 1382 aa19.15■□□□□ 0.66
VPS11-205ENST00000534551 NPC1L1Q9UHC9 1359 aa19.15■□□□□ 0.66
VPS11-205ENST00000534551 NLRP2Q9NX02 1062 aa19.14■□□□□ 0.65
VPS11-205ENST00000534551 KIF24Q5T7B8 1368 aa19.14■□□□□ 0.65
VPS11-205ENST00000534551 RGPD1P0DJD0 1748 aa19.14■□□□□ 0.65
VPS11-205ENST00000534551 USHBP1Q8N6Y0 703 aa19.13■□□□□ 0.65
VPS11-205ENST00000534551 MEGF6O75095 1541 aa19.13■□□□□ 0.65
VPS11-205ENST00000534551 ONECUT3O60422 494 aaPredicted RBP19.12■□□□□ 0.65
VPS11-205ENST00000534551 FAM182BQ5T319 152 aa19.12■□□□□ 0.65
VPS11-205ENST00000534551 BARGINQ6ZT62 677 aa19.12■□□□□ 0.65
VPS11-205ENST00000534551 CARD10Q9BWT7 1032 aa19.12■□□□□ 0.65
VPS11-205ENST00000534551 SBF2Q86WG5 1849 aa19.1■□□□□ 0.65
VPS11-205ENST00000534551 TNS1Q9HBL0 1735 aaKnown RBP19.1■□□□□ 0.65
VPS11-205ENST00000534551 COL3A1P02461 1466 aaPredicted RBP19.09■□□□□ 0.65
VPS11-205ENST00000534551 TNS2Q63HR2 1409 aa19.09■□□□□ 0.65
VPS11-205ENST00000534551 NBPF6Q5VWK0 638 aa19.09■□□□□ 0.65
VPS11-205ENST00000534551 NBPF4Q96M43 638 aa19.09■□□□□ 0.65
VPS11-205ENST00000534551 THRAP3Q9Y2W1 955 aaKnown RBP19.09■□□□□ 0.65
VPS11-205ENST00000534551 SOCS7O14512 581 aa19.08■□□□□ 0.64
VPS11-205ENST00000534551 KRT27Q7Z3Y8 459 aa19.08■□□□□ 0.64
VPS11-205ENST00000534551 PKD1L3Q7Z443 1732 aa19.08■□□□□ 0.64
VPS11-205ENST00000534551 EIF4A2Q14240 407 aaKnown RBP19.07■□□□□ 0.64
VPS11-205ENST00000534551 NCAPD2Q15021 1401 aa19.07■□□□□ 0.64
VPS11-205ENST00000534551 ZNF316A6NFI3 1004 aaPredicted RBP19.05■□□□□ 0.64
VPS11-205ENST00000534551 MTHFSP49914 203 aa19.05■□□□□ 0.64
VPS11-205ENST00000534551 PARD3Q8TEW0 1356 aa19.05■□□□□ 0.64
VPS11-205ENST00000534551 DOT1LQ8TEK3 1739 aa19.04■□□□□ 0.64
VPS11-205ENST00000534551 OVOS2A0A0G2JMS6 1433 aa19.03■□□□□ 0.64
VPS11-205ENST00000534551 IL2RBP14784 551 aa19.03■□□□□ 0.64
VPS11-205ENST00000534551 DDB1Q16531 1140 aa19.02■□□□□ 0.64
VPS11-205ENST00000534551 EYA1Q99502 592 aa19.02■□□□□ 0.64
VPS11-205ENST00000534551 TOGARAM1Q9Y4F4 1720 aa19.01■□□□□ 0.63
VPS11-205ENST00000534551 PPP2R1AP30153 589 aa19.01■□□□□ 0.63
VPS11-205ENST00000534551 UPF1Q92900 1129 aaKnown RBP eCLIP19.01■□□□□ 0.63
VPS11-205ENST00000534551 IGSF1Q8N6C5 1336 aa19■□□□□ 0.63
VPS11-205ENST00000534551 KAT6BQ8WYB5 2073 aa18.99■□□□□ 0.63
VPS11-205ENST00000534551 NHSQ6T4R5 1651 aa18.99■□□□□ 0.63
VPS11-205ENST00000534551 PDE3BQ13370 1112 aa18.99■□□□□ 0.63
VPS11-205ENST00000534551 AEBP1Q8IUX7 1158 aa18.99■□□□□ 0.63
VPS11-205ENST00000534551 VIRMAQ69YN4 1812 aaKnown RBP18.99■□□□□ 0.63
VPS11-205ENST00000534551 IL13P35225 146 aa18.98■□□□□ 0.63
VPS11-205ENST00000534551 MARCH10Q8NA82 808 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms