RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 CTDSPL2Q05D32 466 aa12.93□□□□□ -0.34
CHKA-205ENST00000530730 SH3BP5LQ7L8J4 393 aa12.93□□□□□ -0.34
CHKA-205ENST00000530730 EIF4G3O43432 1585 aaKnown RBP12.93□□□□□ -0.34
CHKA-205ENST00000530730 ARHGEF11O15085 1522 aa12.93□□□□□ -0.34
CHKA-205ENST00000530730 TARBP1Q13395 1621 aaKnown RBP12.92□□□□□ -0.34
CHKA-205ENST00000530730 TREML4Q6UXN2 200 aa12.92□□□□□ -0.34
CHKA-205ENST00000530730 PROCA1Q8NCQ7 364 aaPredicted RBP12.92□□□□□ -0.34
CHKA-205ENST00000530730 GOPCQ9HD26 462 aa12.92□□□□□ -0.34
CHKA-205ENST00000530730 TDRD9Q8NDG6 1382 aaKnown RBP12.92□□□□□ -0.34
CHKA-205ENST00000530730 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
CHKA-205ENST00000530730 SOGA1O94964 1423 aa12.91□□□□□ -0.34
CHKA-205ENST00000530730 SNRPBP14678 240 aaKnown RBP12.91□□□□□ -0.34
CHKA-205ENST00000530730 NR5A1Q13285 461 aa12.91□□□□□ -0.34
CHKA-205ENST00000530730 AGERQ15109 404 aa12.91□□□□□ -0.34
CHKA-205ENST00000530730 TRMT44Q8IYL2 757 aaKnown RBP12.91□□□□□ -0.34
CHKA-205ENST00000530730 KLF16Q9BXK1 252 aaPredicted RBP12.91□□□□□ -0.34
CHKA-205ENST00000530730 MAP4K5Q9Y4K4 846 aa12.91□□□□□ -0.34
CHKA-205ENST00000530730 FBXO31Q5XUX0 539 aaPredicted RBP12.9□□□□□ -0.34
CHKA-205ENST00000530730 TRIM46Q7Z4K8 759 aa12.9□□□□□ -0.34
CHKA-205ENST00000530730 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
CHKA-205ENST00000530730 TIMP2P16035 220 aa12.88□□□□□ -0.35
CHKA-205ENST00000530730 GRM5P41594 1212 aa12.87□□□□□ -0.35
CHKA-205ENST00000530730 BMP1P13497 986 aa12.86□□□□□ -0.35
CHKA-205ENST00000530730 PDXDC2PQ6P474 469 aa12.86□□□□□ -0.35
CHKA-205ENST00000530730 WDR4P57081 412 aaKnown RBP12.85□□□□□ -0.35
CHKA-205ENST00000530730 NFX1Q12986 1120 aaKnown RBP12.85□□□□□ -0.35
CHKA-205ENST00000530730 LRRN4Q8WUT4 740 aa12.85□□□□□ -0.35
CHKA-205ENST00000530730 FKBPLQ9UIM3 349 aa12.85□□□□□ -0.35
CHKA-205ENST00000530730 ARID5BQ14865 1188 aa12.84□□□□□ -0.35
CHKA-205ENST00000530730 CHMP7Q8WUX9 453 aaPredicted RBP12.84□□□□□ -0.35
CHKA-205ENST00000530730 FGD5Q6ZNL6 1462 aa12.84□□□□□ -0.35
CHKA-205ENST00000530730 CHD1O14646 1710 aa12.82□□□□□ -0.36
CHKA-205ENST00000530730 WFS1O76024 890 aa12.82□□□□□ -0.36
CHKA-205ENST00000530730 NR3C2P08235 984 aa12.82□□□□□ -0.36
CHKA-205ENST00000530730 MRPL14Q6P1L8 145 aaKnown RBP12.82□□□□□ -0.36
CHKA-205ENST00000530730 CUX1P39880 1505 aa12.82□□□□□ -0.36
CHKA-205ENST00000530730 GPSM3Q9Y4H4 160 aa12.81□□□□□ -0.36
CHKA-205ENST00000530730 SNAPC4Q5SXM2 1469 aa12.8□□□□□ -0.36
CHKA-205ENST00000530730 ARAP1Q96P48 1450 aa12.8□□□□□ -0.36
CHKA-205ENST00000530730 MAGEB6P1A0A0J9YX57 407 aa12.8□□□□□ -0.36
CHKA-205ENST00000530730 SUPT5HO00267 1087 aaKnown RBP12.8□□□□□ -0.36
CHKA-205ENST00000530730 AP1G2O75843 785 aa12.8□□□□□ -0.36
CHKA-205ENST00000530730 ERFEQ4G0M1 354 aa12.8□□□□□ -0.36
CHKA-205ENST00000530730 ZFP42Q96MM3 310 aa12.8□□□□□ -0.36
CHKA-205ENST00000530730 TERTO14746 1132 aaKnown RBP12.79□□□□□ -0.36
CHKA-205ENST00000530730 ZIC2O95409 532 aaPredicted RBP12.79□□□□□ -0.36
CHKA-205ENST00000530730 RFC5P40937 340 aa12.79□□□□□ -0.36
CHKA-205ENST00000530730 NR6A1Q15406 480 aa12.79□□□□□ -0.36
CHKA-205ENST00000530730 VASH1Q7L8A9 365 aaPredicted RBP12.79□□□□□ -0.36
CHKA-205ENST00000530730 CDV3Q9UKY7 258 aaKnown RBP12.79□□□□□ -0.36
CHKA-205ENST00000530730 ATP1B4Q9UN42 357 aaPredicted RBP12.79□□□□□ -0.36
CHKA-205ENST00000530730 SCARF1Q14162 830 aa12.78□□□□□ -0.36
CHKA-205ENST00000530730 NEUROD2Q15784 382 aa12.78□□□□□ -0.36
CHKA-205ENST00000530730 ITPKCQ96DU7 683 aa12.78□□□□□ -0.36
CHKA-205ENST00000530730 ARHGAP9Q9BRR9 750 aa12.78□□□□□ -0.36
CHKA-205ENST00000530730 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
CHKA-205ENST00000530730 USP17L8P0C7I0 530 aa12.77□□□□□ -0.37
CHKA-205ENST00000530730 FSHRP23945 695 aa12.77□□□□□ -0.37
CHKA-205ENST00000530730 NPAS3Q8IXF0 933 aa12.77□□□□□ -0.37
CHKA-205ENST00000530730 PNMA1Q8ND90 353 aa12.77□□□□□ -0.37
CHKA-205ENST00000530730 PCMTD1Q96MG8 357 aaPredicted RBP12.77□□□□□ -0.37
CHKA-205ENST00000530730 CARD14Q9BXL6 1004 aa12.76□□□□□ -0.37
CHKA-205ENST00000530730 MAGI1Q96QZ7 1491 aaPredicted RBP12.76□□□□□ -0.37
CHKA-205ENST00000530730 WDR97A6NE52 1622 aa12.75□□□□□ -0.37
CHKA-205ENST00000530730 ZFAND3Q9H8U3 227 aa12.75□□□□□ -0.37
CHKA-205ENST00000530730 EMILIN1Q9Y6C2 1016 aa12.75□□□□□ -0.37
CHKA-205ENST00000530730 WIPF1O43516 503 aa12.74□□□□□ -0.37
CHKA-205ENST00000530730 PTK2Q05397 1052 aa12.74□□□□□ -0.37
CHKA-205ENST00000530730 TMEM259Q4ZIN3 620 aa12.74□□□□□ -0.37
CHKA-205ENST00000530730 CCDC116Q8IYX3 515 aa12.74□□□□□ -0.37
CHKA-205ENST00000530730 NXF1Q9UBU9 619 aaKnown RBP12.74□□□□□ -0.37
CHKA-205ENST00000530730 BRPF1P55201 1214 aaPredicted RBP12.73□□□□□ -0.37
CHKA-205ENST00000530730 MEIOBQ8N635 442 aa12.73□□□□□ -0.37
CHKA-205ENST00000530730 CLASP1Q7Z460 1538 aa12.72□□□□□ -0.37
CHKA-205ENST00000530730 SYNJ2O15056 1496 aa12.72□□□□□ -0.37
CHKA-205ENST00000530730 GAPVD1Q14C86 1478 aa12.72□□□□□ -0.37
CHKA-205ENST00000530730 SLC10A4Q96EP9 437 aa12.72□□□□□ -0.37
CHKA-205ENST00000530730 PURBQ96QR8 312 aaKnown RBP12.72□□□□□ -0.37
CHKA-205ENST00000530730 OCSTAMPQ9BR26 566 aa12.72□□□□□ -0.37
CHKA-205ENST00000530730 HMX1Q9NP08 348 aaPredicted RBP12.72□□□□□ -0.37
CHKA-205ENST00000530730 ZBTB33Q86T24 672 aa12.71□□□□□ -0.37
CHKA-205ENST00000530730 SYNJ1O43426 1573 aa12.7□□□□□ -0.38
CHKA-205ENST00000530730 EPS8L1Q8TE68 723 aa12.7□□□□□ -0.38
CHKA-205ENST00000530730 ABCA10Q8WWZ4 1543 aa12.69□□□□□ -0.38
CHKA-205ENST00000530730 IL27Q8NEV9 243 aa12.69□□□□□ -0.38
CHKA-205ENST00000530730 SLC16A10Q8TF71 515 aa12.69□□□□□ -0.38
CHKA-205ENST00000530730 UPP2O95045 317 aa12.68□□□□□ -0.38
CHKA-205ENST00000530730 LCE2CQ5TA81 110 aa12.68□□□□□ -0.38
CHKA-205ENST00000530730 LINC00528Q8N1L1 170 aa12.68□□□□□ -0.38
CHKA-205ENST00000530730 KCTD15Q96SI1 283 aaPredicted RBP12.68□□□□□ -0.38
CHKA-205ENST00000530730 DHX9Q08211 1270 aaKnown RBP12.67□□□□□ -0.38
CHKA-205ENST00000530730 ADAM32Q8TC27 787 aa12.67□□□□□ -0.38
CHKA-205ENST00000530730 PGPEP1Q9NXJ5 209 aa12.67□□□□□ -0.38
CHKA-205ENST00000530730 PPP1R26Q5T8A7 1209 aaPredicted RBP12.66□□□□□ -0.38
CHKA-205ENST00000530730 TSEN34Q9BSV6 310 aaKnown RBP12.66□□□□□ -0.38
CHKA-205ENST00000530730 TRIM34Q9BYJ4 488 aa12.66□□□□□ -0.38
CHKA-205ENST00000530730 WRNQ14191 1432 aaPredicted RBP eCLIP12.65□□□□□ -0.38
CHKA-205ENST00000530730 SOCS7O14512 581 aa12.65□□□□□ -0.38
CHKA-205ENST00000530730 NBPF20Q3BBV1 942 aa12.65□□□□□ -0.38
CHKA-205ENST00000530730 Q6ZVU0 165 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms