RNA–Protein interactions for RNA: ENST00000529265.5

BEST1-206, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,421 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-206ENST00000529265 HOXC9P31274 260 aa18.78■□□□□ 0.6
BEST1-206ENST00000529265 MTHFSP49914 203 aa18.78■□□□□ 0.6
BEST1-206ENST00000529265 IP6K1Q92551 441 aa18.78■□□□□ 0.6
BEST1-206ENST00000529265 PHF23Q9BUL5 403 aaPredicted RBP18.77■□□□□ 0.6
BEST1-206ENST00000529265 STRN4Q9NRL3 753 aa18.77■□□□□ 0.6
BEST1-206ENST00000529265 AFF2P51816 1311 aa18.77■□□□□ 0.6
BEST1-206ENST00000529265 NWD2Q9ULI1 1742 aa18.77■□□□□ 0.6
BEST1-206ENST00000529265 RTL1A6NKG5 1358 aa18.77■□□□□ 0.59
BEST1-206ENST00000529265 FLT4P35916 1363 aa18.77■□□□□ 0.59
BEST1-206ENST00000529265 LTV1Q96GA3 475 aaPredicted RBP18.76■□□□□ 0.59
BEST1-206ENST00000529265 USP21Q9UK80 565 aa18.76■□□□□ 0.59
BEST1-206ENST00000529265 AXIN2Q9Y2T1 843 aa18.76■□□□□ 0.59
BEST1-206ENST00000529265 PEAK1Q9H792 1746 aa18.76■□□□□ 0.59
BEST1-206ENST00000529265 KIF24Q5T7B8 1368 aa18.76■□□□□ 0.59
BEST1-206ENST00000529265 LMO7Q8WWI1 1683 aa18.76■□□□□ 0.59
BEST1-206ENST00000529265 CSB-PGBD3P0DP91 1061 aa18.75■□□□□ 0.59
BEST1-206ENST00000529265 MYBBP1AQ9BQG0 1328 aaKnown RBP18.75■□□□□ 0.59
BEST1-206ENST00000529265 CAMTA1Q9Y6Y1 1673 aa18.75■□□□□ 0.59
BEST1-206ENST00000529265 ABCC6O95255 1503 aa18.75■□□□□ 0.59
BEST1-206ENST00000529265 HSP90AB2PQ58FF8 381 aa18.74■□□□□ 0.59
BEST1-206ENST00000529265 FNBP4Q8N3X1 1017 aaPredicted RBP18.74■□□□□ 0.59
BEST1-206ENST00000529265 BLMP54132 1417 aaPredicted RBP18.74■□□□□ 0.59
BEST1-206ENST00000529265 SLIT2O94813 1529 aa18.74■□□□□ 0.59
BEST1-206ENST00000529265 UNC5CLQ8IV45 518 aa18.74■□□□□ 0.59
BEST1-206ENST00000529265 CFAP53Q96M91 514 aa18.74■□□□□ 0.59
BEST1-206ENST00000529265 ANKRD24Q8TF21 1146 aa18.73■□□□□ 0.59
BEST1-206ENST00000529265 CCDC9Q9Y3X0 531 aaKnown RBP18.73■□□□□ 0.59
BEST1-206ENST00000529265 SMG6Q86US8 1419 aaKnown RBP18.73■□□□□ 0.59
BEST1-206ENST00000529265 INSRP06213 1382 aa18.72■□□□□ 0.59
BEST1-206ENST00000529265 CDK12Q9NYV4 1490 aaPredicted RBP18.72■□□□□ 0.59
BEST1-206ENST00000529265 COL5A2P05997 1499 aaPredicted RBP18.71■□□□□ 0.59
BEST1-206ENST00000529265 ZNF772Q68DY9 489 aaPredicted RBP18.71■□□□□ 0.59
BEST1-206ENST00000529265 NRAPQ86VF7 1730 aa18.71■□□□□ 0.59
BEST1-206ENST00000529265 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.7■□□□□ 0.58
BEST1-206ENST00000529265 BCL9LQ86UU0 1499 aa18.7■□□□□ 0.58
BEST1-206ENST00000529265 TOM1L2Q6ZVM7 507 aa18.7■□□□□ 0.58
BEST1-206ENST00000529265 ERBB3P21860 1342 aa18.69■□□□□ 0.58
BEST1-206ENST00000529265 LARP1Q6PKG0 1096 aaKnown RBP18.69■□□□□ 0.58
BEST1-206ENST00000529265 RGPD2P0DJD1 1756 aa18.68■□□□□ 0.58
BEST1-206ENST00000529265 WDR17Q8IZU2 1322 aa18.68■□□□□ 0.58
BEST1-206ENST00000529265 NLRP2Q9NX02 1062 aa18.68■□□□□ 0.58
BEST1-206ENST00000529265 TRPC5Q9UL62 973 aaPredicted RBP18.68■□□□□ 0.58
BEST1-206ENST00000529265 DIAPH1O60610 1272 aaKnown RBP18.67■□□□□ 0.58
BEST1-206ENST00000529265 EIF4A2Q14240 407 aaKnown RBP18.67■□□□□ 0.58
BEST1-206ENST00000529265 QTRT2Q9H974 415 aaKnown RBP18.67■□□□□ 0.58
BEST1-206ENST00000529265 USP35Q9P2H5 1018 aa18.67■□□□□ 0.58
BEST1-206ENST00000529265 FAM208AQ9UK61 1670 aaKnown RBP18.67■□□□□ 0.58
BEST1-206ENST00000529265 VPS72Q15906 364 aa18.66■□□□□ 0.58
BEST1-206ENST00000529265 NUDCQ9Y266 331 aa18.65■□□□□ 0.58
BEST1-206ENST00000529265 CRB1P82279 1406 aa18.64■□□□□ 0.58
BEST1-206ENST00000529265 ATRNO75882 1429 aa18.63■□□□□ 0.57
BEST1-206ENST00000529265 U2SURPO15042 1029 aaKnown RBP18.63■□□□□ 0.57
BEST1-206ENST00000529265 IL13P35225 146 aa18.63■□□□□ 0.57
BEST1-206ENST00000529265 NBPF6Q5VWK0 638 aa18.63■□□□□ 0.57
BEST1-206ENST00000529265 NBPF4Q96M43 638 aa18.63■□□□□ 0.57
BEST1-206ENST00000529265 CARD10Q9BWT7 1032 aa18.63■□□□□ 0.57
BEST1-206ENST00000529265 SPATA31A5Q5VU36 1347 aa18.62■□□□□ 0.57
BEST1-206ENST00000529265 SPATA31A7Q8IWB4 1347 aa18.62■□□□□ 0.57
BEST1-206ENST00000529265 USHBP1Q8N6Y0 703 aa18.62■□□□□ 0.57
BEST1-206ENST00000529265 GJD4Q96KN9 370 aaPredicted RBP18.62■□□□□ 0.57
BEST1-206ENST00000529265 EYA1Q99502 592 aa18.62■□□□□ 0.57
BEST1-206ENST00000529265 RGS17Q9UGC6 210 aaPredicted RBP18.62■□□□□ 0.57
BEST1-206ENST00000529265 COL3A1P02461 1466 aaPredicted RBP18.62■□□□□ 0.57
BEST1-206ENST00000529265 SPATA31A1Q5TZJ5 1347 aa18.61■□□□□ 0.57
BEST1-206ENST00000529265 TCP11L2Q8N4U5 519 aa18.61■□□□□ 0.57
BEST1-206ENST00000529265 MRS2Q9HD23 443 aa18.61■□□□□ 0.57
BEST1-206ENST00000529265 MIER1Q8N108 512 aa18.6■□□□□ 0.57
BEST1-206ENST00000529265 A0A0G2JS52 829 aa18.58■□□□□ 0.57
BEST1-206ENST00000529265 U2AF1L5P0DN76 240 aaPredicted RBP18.58■□□□□ 0.57
BEST1-206ENST00000529265 RXRBP28702 533 aa18.58■□□□□ 0.57
BEST1-206ENST00000529265 RBM6P78332 1123 aaKnown RBP18.58■□□□□ 0.57
BEST1-206ENST00000529265 U2AF1Q01081 240 aaKnown RBP eCLIP18.58■□□□□ 0.57
BEST1-206ENST00000529265 MYT1Q01538 1121 aa18.58■□□□□ 0.57
BEST1-206ENST00000529265 POTEAQ6S8J7 498 aa18.58■□□□□ 0.57
BEST1-206ENST00000529265 THRAP3Q9Y2W1 955 aaKnown RBP18.58■□□□□ 0.57
BEST1-206ENST00000529265 WDR43Q15061 677 aaKnown RBP eCLIP18.57■□□□□ 0.56
BEST1-206ENST00000529265 FAM98CQ17RN3 349 aaKnown RBP18.57■□□□□ 0.56
BEST1-206ENST00000529265 CCDC184Q52MB2 194 aa18.57■□□□□ 0.56
BEST1-206ENST00000529265 SULT6B1Q6IMI4 303 aa18.57■□□□□ 0.56
BEST1-206ENST00000529265 IGSF1Q8N6C5 1336 aa18.57■□□□□ 0.56
BEST1-206ENST00000529265 HMOX1P09601 288 aa18.57■□□□□ 0.56
BEST1-206ENST00000529265 GLI3P10071 1580 aa18.56■□□□□ 0.56
BEST1-206ENST00000529265 RGPD1P0DJD0 1748 aa18.56■□□□□ 0.56
BEST1-206ENST00000529265 RAPGEF4Q8WZA2 1011 aa18.56■□□□□ 0.56
BEST1-206ENST00000529265 IL2RBP14784 551 aa18.55■□□□□ 0.56
BEST1-206ENST00000529265 BARGINQ6ZT62 677 aa18.55■□□□□ 0.56
BEST1-206ENST00000529265 WNK3Q9BYP7 1800 aa18.55■□□□□ 0.56
BEST1-206ENST00000529265 CCER2I3L3R5 266 aa18.54■□□□□ 0.56
BEST1-206ENST00000529265 TATP17735 454 aaPredicted RBP18.54■□□□□ 0.56
BEST1-206ENST00000529265 AEBP1Q8IUX7 1158 aa18.54■□□□□ 0.56
BEST1-206ENST00000529265 CDCA7Q9BWT1 371 aaPredicted RBP18.53■□□□□ 0.56
BEST1-206ENST00000529265 PARP4Q9UKK3 1724 aaKnown RBP18.52■□□□□ 0.55
BEST1-206ENST00000529265 NCAPD2Q15021 1401 aa18.51■□□□□ 0.55
BEST1-206ENST00000529265 SEPT12Q8IYM1 358 aa18.5■□□□□ 0.55
BEST1-206ENST00000529265 EXOC5O00471 708 aa18.49■□□□□ 0.55
BEST1-206ENST00000529265 FCHSD2O94868 740 aa18.49■□□□□ 0.55
BEST1-206ENST00000529265 NEFMP07197 916 aa18.49■□□□□ 0.55
BEST1-206ENST00000529265 PNNQ9H307 717 aaKnown RBP18.49■□□□□ 0.55
BEST1-206ENST00000529265 KDRP35968 1356 aa18.49■□□□□ 0.55
BEST1-206ENST00000529265 ONECUT3O60422 494 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms