RNA–Protein interactions for RNA: ENST00000529216.1

PABPC4-223, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 317 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-223ENST00000529216 IP6K1Q92551 441 aa11□□□□□ -0.65
PABPC4-223ENST00000529216 PLEKHG5O94827 1062 aa10.99□□□□□ -0.65
PABPC4-223ENST00000529216 ZC3H6P61129 1189 aaKnown RBP10.99□□□□□ -0.65
PABPC4-223ENST00000529216 DIAPH1O60610 1272 aaKnown RBP10.98□□□□□ -0.65
PABPC4-223ENST00000529216 PRDM11Q9NQV5 511 aa10.98□□□□□ -0.65
PABPC4-223ENST00000529216 HSP90AB2PQ58FF8 381 aa10.97□□□□□ -0.65
PABPC4-223ENST00000529216 PNISRQ8TF01 805 aaKnown RBP10.97□□□□□ -0.65
PABPC4-223ENST00000529216 NUDCQ9Y266 331 aa10.97□□□□□ -0.65
PABPC4-223ENST00000529216 LMO7Q8WWI1 1683 aa10.97□□□□□ -0.65
PABPC4-223ENST00000529216 LTN1O94822 1766 aa10.97□□□□□ -0.65
PABPC4-223ENST00000529216 ZBTB7CA1YPR0 619 aa10.96□□□□□ -0.65
PABPC4-223ENST00000529216 IL13P35225 146 aa10.96□□□□□ -0.65
PABPC4-223ENST00000529216 EIF4A2Q14240 407 aaKnown RBP10.96□□□□□ -0.65
PABPC4-223ENST00000529216 WDR43Q15061 677 aaKnown RBP eCLIP10.96□□□□□ -0.65
PABPC4-223ENST00000529216 COL14A1Q05707 1796 aaKnown RBP10.95□□□□□ -0.66
PABPC4-223ENST00000529216 LRP6O75581 1613 aa10.95□□□□□ -0.66
PABPC4-223ENST00000529216 ERBB3P21860 1342 aa10.95□□□□□ -0.66
PABPC4-223ENST00000529216 CHRNA2Q15822 529 aa10.95□□□□□ -0.66
PABPC4-223ENST00000529216 AXIN2Q9Y2T1 843 aa10.95□□□□□ -0.66
PABPC4-223ENST00000529216 COL18A1P39060 1754 aa10.95□□□□□ -0.66
PABPC4-223ENST00000529216 COL5A2P05997 1499 aaPredicted RBP10.94□□□□□ -0.66
PABPC4-223ENST00000529216 FAM83GA6ND36 823 aa10.94□□□□□ -0.66
PABPC4-223ENST00000529216 NUTM2BA6NNL0 878 aaPredicted RBP10.94□□□□□ -0.66
PABPC4-223ENST00000529216 NUTM2EB1AL46 878 aaPredicted RBP10.94□□□□□ -0.66
PABPC4-223ENST00000529216 NUTM2AQ8IVF1 878 aaPredicted RBP10.94□□□□□ -0.66
PABPC4-223ENST00000529216 ANKRD24Q8TF21 1146 aa10.94□□□□□ -0.66
PABPC4-223ENST00000529216 CAMTA1Q9Y6Y1 1673 aa10.94□□□□□ -0.66
PABPC4-223ENST00000529216 NCAPD2Q15021 1401 aa10.93□□□□□ -0.66
PABPC4-223ENST00000529216 MAP2P11137 1827 aaKnown RBP10.93□□□□□ -0.66
PABPC4-223ENST00000529216 IGSF1Q8N6C5 1336 aa10.93□□□□□ -0.66
PABPC4-223ENST00000529216 ADAMTS2O95450 1211 aa10.93□□□□□ -0.66
PABPC4-223ENST00000529216 SLIT2O94813 1529 aa10.93□□□□□ -0.66
PABPC4-223ENST00000529216 RGPD1P0DJD0 1748 aa10.92□□□□□ -0.66
PABPC4-223ENST00000529216 KDRP35968 1356 aa10.92□□□□□ -0.66
PABPC4-223ENST00000529216 WDR17Q8IZU2 1322 aa10.92□□□□□ -0.66
PABPC4-223ENST00000529216 U2SURPO15042 1029 aaKnown RBP10.92□□□□□ -0.66
PABPC4-223ENST00000529216 U2AF1L5P0DN76 240 aaPredicted RBP10.92□□□□□ -0.66
PABPC4-223ENST00000529216 U2AF1Q01081 240 aaKnown RBP eCLIP10.92□□□□□ -0.66
PABPC4-223ENST00000529216 FAM9BQ8IZU0 186 aa10.92□□□□□ -0.66
PABPC4-223ENST00000529216 ADAMTS8Q9UP79 889 aa10.92□□□□□ -0.66
PABPC4-223ENST00000529216 FAM208AQ9UK61 1670 aaKnown RBP10.92□□□□□ -0.66
PABPC4-223ENST00000529216 LTV1Q96GA3 475 aaPredicted RBP10.91□□□□□ -0.66
PABPC4-223ENST00000529216 EYA1Q99502 592 aa10.91□□□□□ -0.66
PABPC4-223ENST00000529216 BTG4Q9NY30 223 aa10.91□□□□□ -0.66
PABPC4-223ENST00000529216 PLEKHG2Q9H7P9 1386 aa10.9□□□□□ -0.66
PABPC4-223ENST00000529216 PLCH1Q4KWH8 1693 aa10.9□□□□□ -0.66
PABPC4-223ENST00000529216 FCHSD2O94868 740 aa10.9□□□□□ -0.66
PABPC4-223ENST00000529216 PNNQ9H307 717 aaKnown RBP10.9□□□□□ -0.66
PABPC4-223ENST00000529216 CRB1P82279 1406 aa10.9□□□□□ -0.66
PABPC4-223ENST00000529216 CSB-PGBD3P0DP91 1061 aa10.89□□□□□ -0.67
PABPC4-223ENST00000529216 MEX3CQ5U5Q3 659 aaKnown RBP10.89□□□□□ -0.67
PABPC4-223ENST00000529216 NBPF6Q5VWK0 638 aa10.89□□□□□ -0.67
PABPC4-223ENST00000529216 FNBP4Q8N3X1 1017 aaPredicted RBP10.89□□□□□ -0.67
PABPC4-223ENST00000529216 NBPF4Q96M43 638 aa10.89□□□□□ -0.67
PABPC4-223ENST00000529216 RSPH6AQ9H0K4 717 aa10.89□□□□□ -0.67
PABPC4-223ENST00000529216 NRAPQ86VF7 1730 aa10.89□□□□□ -0.67
PABPC4-223ENST00000529216 NWD2Q9ULI1 1742 aa10.89□□□□□ -0.67
PABPC4-223ENST00000529216 EVA1CP58658 441 aa10.88□□□□□ -0.67
PABPC4-223ENST00000529216 SULT6B1Q6IMI4 303 aa10.88□□□□□ -0.67
PABPC4-223ENST00000529216 NGLY1Q96IV0 654 aa10.88□□□□□ -0.67
PABPC4-223ENST00000529216 C8orf37Q96NL8 207 aa10.88□□□□□ -0.67
PABPC4-223ENST00000529216 NLRP2Q9NX02 1062 aa10.88□□□□□ -0.67
PABPC4-223ENST00000529216 BCL9LQ86UU0 1499 aa10.87□□□□□ -0.67
PABPC4-223ENST00000529216 HMOX1P09601 288 aa10.87□□□□□ -0.67
PABPC4-223ENST00000529216 PRKAR2BP31323 418 aa10.87□□□□□ -0.67
PABPC4-223ENST00000529216 LARP1Q6PKG0 1096 aaKnown RBP10.87□□□□□ -0.67
PABPC4-223ENST00000529216 TOM1L2Q6ZVM7 507 aa10.87□□□□□ -0.67
PABPC4-223ENST00000529216 AEBP1Q8IUX7 1158 aa10.87□□□□□ -0.67
PABPC4-223ENST00000529216 UNC5CLQ8IV45 518 aa10.87□□□□□ -0.67
PABPC4-223ENST00000529216 RUNDC1Q96C34 613 aa10.87□□□□□ -0.67
PABPC4-223ENST00000529216 PLEKHF1Q96S99 279 aa10.87□□□□□ -0.67
PABPC4-223ENST00000529216 CARD10Q9BWT7 1032 aa10.87□□□□□ -0.67
PABPC4-223ENST00000529216 STRN4Q9NRL3 753 aa10.87□□□□□ -0.67
PABPC4-223ENST00000529216 MAPK8IP3Q9UPT6 1336 aa10.86□□□□□ -0.67
PABPC4-223ENST00000529216 USHBP1Q8N6Y0 703 aa10.86□□□□□ -0.67
PABPC4-223ENST00000529216 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.85□□□□□ -0.67
PABPC4-223ENST00000529216 NEFMP07197 916 aa10.85□□□□□ -0.67
PABPC4-223ENST00000529216 CCDC146Q8IYE0 955 aa10.85□□□□□ -0.67
PABPC4-223ENST00000529216 AFF2P51816 1311 aa10.84□□□□□ -0.67
PABPC4-223ENST00000529216 VPS72Q15906 364 aa10.84□□□□□ -0.67
PABPC4-223ENST00000529216 NCBP3Q53F19 620 aaKnown RBP10.84□□□□□ -0.67
PABPC4-223ENST00000529216 NGEFQ8N5V2 710 aa10.84□□□□□ -0.67
PABPC4-223ENST00000529216 USP21Q9UK80 565 aa10.84□□□□□ -0.67
PABPC4-223ENST00000529216 THRAP3Q9Y2W1 955 aaKnown RBP10.84□□□□□ -0.67
PABPC4-223ENST00000529216 RGPD5Q99666 1765 aa10.84□□□□□ -0.67
PABPC4-223ENST00000529216 MEGF6O75095 1541 aa10.84□□□□□ -0.67
PABPC4-223ENST00000529216 OVOS2A0A0G2JMS6 1433 aa10.84□□□□□ -0.67
PABPC4-223ENST00000529216 DISP2A7MBM2 1401 aa10.84□□□□□ -0.67
PABPC4-223ENST00000529216 SPATA31A1Q5TZJ5 1347 aa10.84□□□□□ -0.67
PABPC4-223ENST00000529216 SPATA31A5Q5VU36 1347 aa10.84□□□□□ -0.67
PABPC4-223ENST00000529216 SPATA31A7Q8IWB4 1347 aa10.84□□□□□ -0.67
PABPC4-223ENST00000529216 TCP11L2Q8N4U5 519 aa10.83□□□□□ -0.68
PABPC4-223ENST00000529216 RAPGEF4Q8WZA2 1011 aa10.83□□□□□ -0.68
PABPC4-223ENST00000529216 ATRNO75882 1429 aa10.83□□□□□ -0.68
PABPC4-223ENST00000529216 APAF1O14727 1248 aa10.82□□□□□ -0.68
PABPC4-223ENST00000529216 IL2RBP14784 551 aa10.82□□□□□ -0.68
PABPC4-223ENST00000529216 TATP17735 454 aaPredicted RBP10.82□□□□□ -0.68
PABPC4-223ENST00000529216 HNRNPUQ00839 825 aaKnown RBP eCLIP10.82□□□□□ -0.68
PABPC4-223ENST00000529216 AMOTQ4VCS5 1084 aa10.82□□□□□ -0.68
PABPC4-223ENST00000529216 PHACTR3Q96KR7 559 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms