RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 MTHFSP49914 203 aa10.61□□□□□ -0.71
SSBP3-211ENST00000528787 CABLES1Q8TDN4 633 aa10.61□□□□□ -0.71
SSBP3-211ENST00000528787 POLKQ9UBT6 870 aa10.61□□□□□ -0.71
SSBP3-211ENST00000528787 MAP3K19Q56UN5 1328 aa10.6□□□□□ -0.71
SSBP3-211ENST00000528787 ZBTB7CA1YPR0 619 aa10.6□□□□□ -0.71
SSBP3-211ENST00000528787 DIAPH1O60610 1272 aaKnown RBP10.6□□□□□ -0.71
SSBP3-211ENST00000528787 ADAMTS2O95450 1211 aa10.6□□□□□ -0.71
SSBP3-211ENST00000528787 CSB-PGBD3P0DP91 1061 aa10.6□□□□□ -0.71
SSBP3-211ENST00000528787 HOXC9P31274 260 aa10.6□□□□□ -0.71
SSBP3-211ENST00000528787 C8orf37Q96NL8 207 aa10.6□□□□□ -0.71
SSBP3-211ENST00000528787 CDCA7Q9BWT1 371 aaPredicted RBP10.6□□□□□ -0.71
SSBP3-211ENST00000528787 ZRANB1Q9UGI0 708 aa10.6□□□□□ -0.71
SSBP3-211ENST00000528787 PLCH1Q4KWH8 1693 aa10.6□□□□□ -0.71
SSBP3-211ENST00000528787 PLEKHG5O94827 1062 aa10.59□□□□□ -0.71
SSBP3-211ENST00000528787 WDR43Q15061 677 aaKnown RBP eCLIP10.59□□□□□ -0.71
SSBP3-211ENST00000528787 FNBP4Q8N3X1 1017 aaPredicted RBP10.59□□□□□ -0.71
SSBP3-211ENST00000528787 PHF23Q9BUL5 403 aaPredicted RBP10.59□□□□□ -0.71
SSBP3-211ENST00000528787 THRAP3Q9Y2W1 955 aaKnown RBP10.59□□□□□ -0.71
SSBP3-211ENST00000528787 LMO7Q8WWI1 1683 aa10.58□□□□□ -0.72
SSBP3-211ENST00000528787 FAM83GA6ND36 823 aa10.58□□□□□ -0.72
SSBP3-211ENST00000528787 CNGB1Q14028 1251 aaPredicted RBP10.58□□□□□ -0.72
SSBP3-211ENST00000528787 RRS1Q15050 365 aaKnown RBP10.58□□□□□ -0.72
SSBP3-211ENST00000528787 UNC5CLQ8IV45 518 aa10.58□□□□□ -0.72
SSBP3-211ENST00000528787 BTG4Q9NY30 223 aa10.58□□□□□ -0.72
SSBP3-211ENST00000528787 USP21Q9UK80 565 aa10.58□□□□□ -0.72
SSBP3-211ENST00000528787 TRPC5Q9UL62 973 aaPredicted RBP10.58□□□□□ -0.72
SSBP3-211ENST00000528787 SLIT2O94813 1529 aa10.58□□□□□ -0.72
SSBP3-211ENST00000528787 ERBB3P21860 1342 aa10.58□□□□□ -0.72
SSBP3-211ENST00000528787 WDR17Q8IZU2 1322 aa10.58□□□□□ -0.72
SSBP3-211ENST00000528787 COL18A1P39060 1754 aa10.57□□□□□ -0.72
SSBP3-211ENST00000528787 TOM1L2Q6ZVM7 507 aa10.57□□□□□ -0.72
SSBP3-211ENST00000528787 ILDR1Q86SU0 546 aaPredicted RBP10.57□□□□□ -0.72
SSBP3-211ENST00000528787 ANKRD24Q8TF21 1146 aa10.57□□□□□ -0.72
SSBP3-211ENST00000528787 EMILIN1Q9Y6C2 1016 aa10.57□□□□□ -0.72
SSBP3-211ENST00000528787 CRB1P82279 1406 aa10.57□□□□□ -0.72
SSBP3-211ENST00000528787 COL5A2P05997 1499 aaPredicted RBP10.56□□□□□ -0.72
SSBP3-211ENST00000528787 MRS2Q9HD23 443 aa10.56□□□□□ -0.72
SSBP3-211ENST00000528787 RGPD5Q99666 1765 aa10.56□□□□□ -0.72
SSBP3-211ENST00000528787 CHRNA2Q15822 529 aa10.55□□□□□ -0.72
SSBP3-211ENST00000528787 VPS72Q15906 364 aa10.55□□□□□ -0.72
SSBP3-211ENST00000528787 HSP90AB2PQ58FF8 381 aa10.55□□□□□ -0.72
SSBP3-211ENST00000528787 CARD10Q9BWT7 1032 aa10.55□□□□□ -0.72
SSBP3-211ENST00000528787 AFF2P51816 1311 aa10.55□□□□□ -0.72
SSBP3-211ENST00000528787 LRP6O75581 1613 aa10.55□□□□□ -0.72
SSBP3-211ENST00000528787 CAMTA1Q9Y6Y1 1673 aa10.54□□□□□ -0.72
SSBP3-211ENST00000528787 NRAPQ86VF7 1730 aa10.54□□□□□ -0.72
SSBP3-211ENST00000528787 RAPGEF4Q8WZA2 1011 aa10.54□□□□□ -0.72
SSBP3-211ENST00000528787 STRN4Q9NRL3 753 aa10.54□□□□□ -0.72
SSBP3-211ENST00000528787 NLRP2Q9NX02 1062 aa10.54□□□□□ -0.72
SSBP3-211ENST00000528787 CCDC9Q9Y3X0 531 aaKnown RBP10.54□□□□□ -0.72
SSBP3-211ENST00000528787 PEAK1Q9H792 1746 aa10.53□□□□□ -0.72
SSBP3-211ENST00000528787 FCHSD2O94868 740 aa10.53□□□□□ -0.72
SSBP3-211ENST00000528787 TCP11L2Q8N4U5 519 aa10.53□□□□□ -0.72
SSBP3-211ENST00000528787 NGEFQ8N5V2 710 aa10.53□□□□□ -0.72
SSBP3-211ENST00000528787 PARP4Q9UKK3 1724 aaKnown RBP10.53□□□□□ -0.72
SSBP3-211ENST00000528787 U2SURPO15042 1029 aaKnown RBP10.52□□□□□ -0.73
SSBP3-211ENST00000528787 U2AF1L5P0DN76 240 aaPredicted RBP10.52□□□□□ -0.73
SSBP3-211ENST00000528787 TATP17735 454 aaPredicted RBP10.52□□□□□ -0.73
SSBP3-211ENST00000528787 IL13P35225 146 aa10.52□□□□□ -0.73
SSBP3-211ENST00000528787 U2AF1Q01081 240 aaKnown RBP eCLIP10.52□□□□□ -0.73
SSBP3-211ENST00000528787 EIF4A2Q14240 407 aaKnown RBP10.52□□□□□ -0.73
SSBP3-211ENST00000528787 AMOTQ4VCS5 1084 aa10.52□□□□□ -0.73
SSBP3-211ENST00000528787 BARGINQ6ZT62 677 aa10.52□□□□□ -0.73
SSBP3-211ENST00000528787 LTV1Q96GA3 475 aaPredicted RBP10.52□□□□□ -0.73
SSBP3-211ENST00000528787 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.52□□□□□ -0.73
SSBP3-211ENST00000528787 IGSF1Q8N6C5 1336 aa10.52□□□□□ -0.73
SSBP3-211ENST00000528787 MAPK8IP3Q9UPT6 1336 aa10.52□□□□□ -0.73
SSBP3-211ENST00000528787 BCL9LQ86UU0 1499 aa10.51□□□□□ -0.73
SSBP3-211ENST00000528787 IL2RBP14784 551 aa10.51□□□□□ -0.73
SSBP3-211ENST00000528787 RBM6P78332 1123 aaKnown RBP10.51□□□□□ -0.73
SSBP3-211ENST00000528787 GJD4Q96KN9 370 aaPredicted RBP10.51□□□□□ -0.73
SSBP3-211ENST00000528787 SPG7Q9UQ90 795 aa10.51□□□□□ -0.73
SSBP3-211ENST00000528787 AXIN2Q9Y2T1 843 aa10.51□□□□□ -0.73
SSBP3-211ENST00000528787 SPATA31A1Q5TZJ5 1347 aa10.51□□□□□ -0.73
SSBP3-211ENST00000528787 SPATA31A5Q5VU36 1347 aa10.51□□□□□ -0.73
SSBP3-211ENST00000528787 SPATA31A7Q8IWB4 1347 aa10.51□□□□□ -0.73
SSBP3-211ENST00000528787 KDRP35968 1356 aa10.51□□□□□ -0.73
SSBP3-211ENST00000528787 COL3A1P02461 1466 aaPredicted RBP10.5□□□□□ -0.73
SSBP3-211ENST00000528787 QTRT2Q9H974 415 aaKnown RBP10.5□□□□□ -0.73
SSBP3-211ENST00000528787 RGPD1P0DJD0 1748 aa10.5□□□□□ -0.73
SSBP3-211ENST00000528787 ATRNO75882 1429 aa10.5□□□□□ -0.73
SSBP3-211ENST00000528787 HSP90AB1P08238 724 aaKnown RBP10.49□□□□□ -0.73
SSBP3-211ENST00000528787 FBLN1P23142 703 aa10.49□□□□□ -0.73
SSBP3-211ENST00000528787 HMGB2P26583 209 aaKnown RBP10.49□□□□□ -0.73
SSBP3-211ENST00000528787 RXRBP28702 533 aa10.49□□□□□ -0.73
SSBP3-211ENST00000528787 LMOD3Q0VAK6 560 aa10.49□□□□□ -0.73
SSBP3-211ENST00000528787 PLEKHO1Q53GL0 409 aaPredicted RBP10.49□□□□□ -0.73
SSBP3-211ENST00000528787 SULT6B1Q6IMI4 303 aa10.49□□□□□ -0.73
SSBP3-211ENST00000528787 LARP1Q6PKG0 1096 aaKnown RBP10.49□□□□□ -0.73
SSBP3-211ENST00000528787 GAS2L2Q8NHY3 880 aa10.49□□□□□ -0.73
SSBP3-211ENST00000528787 EYA1Q99502 592 aa10.49□□□□□ -0.73
SSBP3-211ENST00000528787 WNK3Q9BYP7 1800 aa10.49□□□□□ -0.73
SSBP3-211ENST00000528787 NCAPD2Q15021 1401 aa10.49□□□□□ -0.73
SSBP3-211ENST00000528787 EXOC5O00471 708 aa10.48□□□□□ -0.73
SSBP3-211ENST00000528787 NCBP3Q53F19 620 aaKnown RBP10.48□□□□□ -0.73
SSBP3-211ENST00000528787 A0A0G2JS52 829 aa10.47□□□□□ -0.73
SSBP3-211ENST00000528787 MYT1Q01538 1121 aa10.47□□□□□ -0.73
SSBP3-211ENST00000528787 C1orf141Q5JVX7 400 aa10.47□□□□□ -0.73
SSBP3-211ENST00000528787 NBPF6Q5VWK0 638 aa10.47□□□□□ -0.73
SSBP3-211ENST00000528787 MIER1Q8N108 512 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms