RNA–Protein interactions for RNA: ENST00000528439.5

RPS3-210, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-210ENST00000528439 U2SURPO15042 1029 aaKnown RBP13.37□□□□□ -0.27
RPS3-210ENST00000528439 PLEKHG5O94827 1062 aa13.37□□□□□ -0.27
RPS3-210ENST00000528439 U2AF1L5P0DN76 240 aaPredicted RBP13.37□□□□□ -0.27
RPS3-210ENST00000528439 U2AF1Q01081 240 aaKnown RBP eCLIP13.37□□□□□ -0.27
RPS3-210ENST00000528439 EIF4A2Q14240 407 aaKnown RBP13.37□□□□□ -0.27
RPS3-210ENST00000528439 COL16A1Q07092 1604 aaPredicted RBP13.36□□□□□ -0.27
RPS3-210ENST00000528439 GCP02774 474 aa13.36□□□□□ -0.27
RPS3-210ENST00000528439 HOXC9P31274 260 aa13.36□□□□□ -0.27
RPS3-210ENST00000528439 COL18A1P39060 1754 aa13.35□□□□□ -0.27
RPS3-210ENST00000528439 KCNH5Q8NCM2 988 aa13.35□□□□□ -0.27
RPS3-210ENST00000528439 PHLPP1O60346 1717 aa13.34□□□□□ -0.27
RPS3-210ENST00000528439 AMPHP49418 695 aa13.34□□□□□ -0.27
RPS3-210ENST00000528439 ARHGEF25Q86VW2 580 aa13.34□□□□□ -0.27
RPS3-210ENST00000528439 CABLES1Q8TDN4 633 aa13.34□□□□□ -0.27
RPS3-210ENST00000528439 PLEKHF1Q96S99 279 aa13.34□□□□□ -0.27
RPS3-210ENST00000528439 RSPH6AQ9H0K4 717 aa13.34□□□□□ -0.27
RPS3-210ENST00000528439 NUDCQ9Y266 331 aa13.34□□□□□ -0.27
RPS3-210ENST00000528439 RGPD5Q99666 1765 aa13.33□□□□□ -0.28
RPS3-210ENST00000528439 COL22A1Q8NFW1 1626 aaPredicted RBP13.33□□□□□ -0.28
RPS3-210ENST00000528439 APAF1O14727 1248 aa13.33□□□□□ -0.28
RPS3-210ENST00000528439 RUNDC1Q96C34 613 aa13.33□□□□□ -0.28
RPS3-210ENST00000528439 SALL2Q9Y467 1007 aaPredicted RBP13.33□□□□□ -0.28
RPS3-210ENST00000528439 CAMTA1Q9Y6Y1 1673 aa13.33□□□□□ -0.28
RPS3-210ENST00000528439 ZNF521Q96K83 1311 aa13.33□□□□□ -0.28
RPS3-210ENST00000528439 RGPD2P0DJD1 1756 aa13.32□□□□□ -0.28
RPS3-210ENST00000528439 HMOX1P09601 288 aa13.32□□□□□ -0.28
RPS3-210ENST00000528439 AEBP1Q8IUX7 1158 aa13.32□□□□□ -0.28
RPS3-210ENST00000528439 ABCC6O95255 1503 aa13.32□□□□□ -0.28
RPS3-210ENST00000528439 IP6K1Q92551 441 aa13.31□□□□□ -0.28
RPS3-210ENST00000528439 IGSF1Q8N6C5 1336 aa13.31□□□□□ -0.28
RPS3-210ENST00000528439 LMO7Q8WWI1 1683 aa13.31□□□□□ -0.28
RPS3-210ENST00000528439 ZBTB7CA1YPR0 619 aa13.3□□□□□ -0.28
RPS3-210ENST00000528439 PRKAR2BP31323 418 aa13.3□□□□□ -0.28
RPS3-210ENST00000528439 ZC3H6P61129 1189 aaKnown RBP13.3□□□□□ -0.28
RPS3-210ENST00000528439 TCP11L2Q8N4U5 519 aa13.3□□□□□ -0.28
RPS3-210ENST00000528439 RRP7AQ9Y3A4 280 aaKnown RBP13.3□□□□□ -0.28
RPS3-210ENST00000528439 CPDO75976 1380 aa13.3□□□□□ -0.28
RPS3-210ENST00000528439 KDRP35968 1356 aa13.3□□□□□ -0.28
RPS3-210ENST00000528439 KIAA0232Q92628 1395 aa13.3□□□□□ -0.28
RPS3-210ENST00000528439 HSPA1LP34931 641 aa13.29□□□□□ -0.28
RPS3-210ENST00000528439 NCAPD2Q15021 1401 aa13.29□□□□□ -0.28
RPS3-210ENST00000528439 FCHSD2O94868 740 aa13.28□□□□□ -0.28
RPS3-210ENST00000528439 LTV1Q96GA3 475 aaPredicted RBP13.28□□□□□ -0.28
RPS3-210ENST00000528439 EYA1Q99502 592 aa13.28□□□□□ -0.28
RPS3-210ENST00000528439 AXIN2Q9Y2T1 843 aa13.28□□□□□ -0.28
RPS3-210ENST00000528439 FAM208AQ9UK61 1670 aaKnown RBP13.28□□□□□ -0.28
RPS3-210ENST00000528439 SULT6B1Q6IMI4 303 aa13.27□□□□□ -0.29
RPS3-210ENST00000528439 CDCA7LQ96GN5 454 aa13.27□□□□□ -0.29
RPS3-210ENST00000528439 PHACTR3Q96KR7 559 aa13.27□□□□□ -0.29
RPS3-210ENST00000528439 CHRNA2Q15822 529 aa13.26□□□□□ -0.29
RPS3-210ENST00000528439 ILDR1Q86SU0 546 aaPredicted RBP13.26□□□□□ -0.29
RPS3-210ENST00000528439 DLG5Q8TDM6 1919 aa13.26□□□□□ -0.29
RPS3-210ENST00000528439 ERBB3P21860 1342 aa13.25□□□□□ -0.29
RPS3-210ENST00000528439 MAPK8IP3Q9UPT6 1336 aa13.25□□□□□ -0.29
RPS3-210ENST00000528439 TMPOP42166 694 aaKnown RBP13.25□□□□□ -0.29
RPS3-210ENST00000528439 USHBP1Q8N6Y0 703 aa13.25□□□□□ -0.29
RPS3-210ENST00000528439 ANKRD24Q8TF21 1146 aa13.25□□□□□ -0.29
RPS3-210ENST00000528439 LRRC59Q96AG4 307 aaKnown RBP13.25□□□□□ -0.29
RPS3-210ENST00000528439 NEUROD2Q15784 382 aa13.24□□□□□ -0.29
RPS3-210ENST00000528439 NBPF6Q5VWK0 638 aa13.24□□□□□ -0.29
RPS3-210ENST00000528439 WWC1Q8IX03 1113 aa13.24□□□□□ -0.29
RPS3-210ENST00000528439 NBPF4Q96M43 638 aa13.24□□□□□ -0.29
RPS3-210ENST00000528439 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
RPS3-210ENST00000528439 JCADQ9P266 1359 aa13.23□□□□□ -0.29
RPS3-210ENST00000528439 TRIM35Q9UPQ4 493 aa13.23□□□□□ -0.29
RPS3-210ENST00000528439 COL5A2P05997 1499 aaPredicted RBP13.23□□□□□ -0.29
RPS3-210ENST00000528439 PDE3BQ13370 1112 aa13.22□□□□□ -0.29
RPS3-210ENST00000528439 NFE2L2Q16236 605 aa13.22□□□□□ -0.29
RPS3-210ENST00000528439 CCDC27Q2M243 656 aa13.22□□□□□ -0.29
RPS3-210ENST00000528439 NCBP3Q53F19 620 aaKnown RBP13.22□□□□□ -0.29
RPS3-210ENST00000528439 NGEFQ8N5V2 710 aa13.22□□□□□ -0.29
RPS3-210ENST00000528439 PNNQ9H307 717 aaKnown RBP13.22□□□□□ -0.29
RPS3-210ENST00000528439 PRDM11Q9NQV5 511 aa13.21□□□□□ -0.29
RPS3-210ENST00000528439 COL14A1Q05707 1796 aaKnown RBP13.21□□□□□ -0.29
RPS3-210ENST00000528439 PLCH1Q4KWH8 1693 aa13.21□□□□□ -0.3
RPS3-210ENST00000528439 HAP1P54257 671 aaPredicted RBP13.2□□□□□ -0.3
RPS3-210ENST00000528439 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
RPS3-210ENST00000528439 SLFN5Q08AF3 891 aa13.2□□□□□ -0.3
RPS3-210ENST00000528439 DUSP27Q5VZP5 1158 aa13.2□□□□□ -0.3
RPS3-210ENST00000528439 LRRC37A3O60309 1634 aa13.2□□□□□ -0.3
RPS3-210ENST00000528439 MEGF6O75095 1541 aa13.19□□□□□ -0.3
RPS3-210ENST00000528439 RIPK4P57078 832 aa13.19□□□□□ -0.3
RPS3-210ENST00000528439 TRMT2AQ8IZ69 625 aaKnown RBP13.19□□□□□ -0.3
RPS3-210ENST00000528439 NRAPQ86VF7 1730 aa13.19□□□□□ -0.3
RPS3-210ENST00000528439 FAM83GA6ND36 823 aa13.18□□□□□ -0.3
RPS3-210ENST00000528439 MTHFSDQ2M296 383 aaKnown RBP13.18□□□□□ -0.3
RPS3-210ENST00000528439 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
RPS3-210ENST00000528439 NEFMP07197 916 aa13.17□□□□□ -0.3
RPS3-210ENST00000528439 WDR63Q8IWG1 891 aa13.17□□□□□ -0.3
RPS3-210ENST00000528439 PKD1L3Q7Z443 1732 aa13.16□□□□□ -0.3
RPS3-210ENST00000528439 SPATA31A6Q5VVP1 1343 aa13.16□□□□□ -0.3
RPS3-210ENST00000528439 E9PSI1 815 aa13.16□□□□□ -0.3
RPS3-210ENST00000528439 WDR17Q8IZU2 1322 aa13.15□□□□□ -0.3
RPS3-210ENST00000528439 LRP6O75581 1613 aa13.15□□□□□ -0.3
RPS3-210ENST00000528439 DCTN1Q14203 1278 aa13.15□□□□□ -0.3
RPS3-210ENST00000528439 NLRP2Q9NX02 1062 aa13.15□□□□□ -0.3
RPS3-210ENST00000528439 CSB-PGBD3P0DP91 1061 aa13.14□□□□□ -0.31
RPS3-210ENST00000528439 MAP3K5Q99683 1374 aa13.14□□□□□ -0.31
RPS3-210ENST00000528439 IL16Q14005 1332 aa13.13□□□□□ -0.31
RPS3-210ENST00000528439 FANCIQ9NVI1 1328 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms