RNA–Protein interactions for RNA: ENST00000523832.1

CDKL3-210, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKL3, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-210ENST00000523832 FMNL1O95466 1100 aaPredicted RBP7.26□□□□□ -1.25
CDKL3-210ENST00000523832 CD46P15529 392 aa7.26□□□□□ -1.25
CDKL3-210ENST00000523832 NOM1Q5C9Z4 860 aaKnown RBP7.26□□□□□ -1.25
CDKL3-210ENST00000523832 TMEM164Q5U3C3 297 aa7.26□□□□□ -1.25
CDKL3-210ENST00000523832 CWC22Q9HCG8 908 aaKnown RBP7.26□□□□□ -1.25
CDKL3-210ENST00000523832 PPP1R1BQ9UD71 204 aaPredicted RBP7.26□□□□□ -1.25
CDKL3-210ENST00000523832 SALL2Q9Y467 1007 aaPredicted RBP7.26□□□□□ -1.25
CDKL3-210ENST00000523832 PCDHB15Q9Y5E8 787 aa7.26□□□□□ -1.25
CDKL3-210ENST00000523832 GPR37L1O60883 481 aa7.25□□□□□ -1.25
CDKL3-210ENST00000523832 FAM160A2Q8N612 972 aaPredicted RBP7.25□□□□□ -1.25
CDKL3-210ENST00000523832 BCL11AQ9H165 835 aa7.25□□□□□ -1.25
CDKL3-210ENST00000523832 GDF9O60383 454 aa7.24□□□□□ -1.25
CDKL3-210ENST00000523832 BRD2P25440 801 aaKnown RBP7.24□□□□□ -1.25
CDKL3-210ENST00000523832 SSFA2P28290 1259 aa7.24□□□□□ -1.25
CDKL3-210ENST00000523832 GRIPAP1Q4V328 841 aa7.24□□□□□ -1.25
CDKL3-210ENST00000523832 NAALADL2Q58DX5 795 aa7.24□□□□□ -1.25
CDKL3-210ENST00000523832 BRICD5Q6PL45 260 aa7.24□□□□□ -1.25
CDKL3-210ENST00000523832 TBC1D9Q6ZT07 1266 aa7.24□□□□□ -1.25
CDKL3-210ENST00000523832 TRIM34Q9BYJ4 488 aa7.24□□□□□ -1.25
CDKL3-210ENST00000523832 ANKRD33BA6NCL7 494 aa7.23□□□□□ -1.25
CDKL3-210ENST00000523832 NDUFV2P19404 249 aa7.23□□□□□ -1.25
CDKL3-210ENST00000523832 KANK4Q5T7N3 995 aaPredicted RBP7.23□□□□□ -1.25
CDKL3-210ENST00000523832 NPAS4Q8IUM7 802 aa7.23□□□□□ -1.25
CDKL3-210ENST00000523832 ZBTB3Q9H5J0 574 aa7.23□□□□□ -1.25
CDKL3-210ENST00000523832 ZMIZ1Q9ULJ6 1067 aa7.23□□□□□ -1.25
CDKL3-210ENST00000523832 FCF1Q9Y324 198 aaKnown RBP7.23□□□□□ -1.25
CDKL3-210ENST00000523832 ANKRD62A6NC57 917 aa7.22□□□□□ -1.25
CDKL3-210ENST00000523832 TNFRSF10AO00220 468 aa7.22□□□□□ -1.25
CDKL3-210ENST00000523832 RNF19BQ6ZMZ0 732 aa7.22□□□□□ -1.25
CDKL3-210ENST00000523832 CABLES1Q8TDN4 633 aa7.22□□□□□ -1.25
CDKL3-210ENST00000523832 NOVA2Q9UNW9 492 aaKnown RBP7.22□□□□□ -1.25
CDKL3-210ENST00000523832 PKDCCQ504Y2 493 aa7.22□□□□□ -1.25
CDKL3-210ENST00000523832 PNMA1Q8ND90 353 aa7.22□□□□□ -1.25
CDKL3-210ENST00000523832 STK32AQ8WU08 396 aa7.22□□□□□ -1.25
CDKL3-210ENST00000523832 HMX1Q9NP08 348 aaPredicted RBP7.22□□□□□ -1.25
CDKL3-210ENST00000523832 PRDM9Q9NQV7 894 aa7.22□□□□□ -1.25
CDKL3-210ENST00000523832 KDM4AO75164 1064 aa7.21□□□□□ -1.26
CDKL3-210ENST00000523832 DGAT1O75907 488 aa7.21□□□□□ -1.26
CDKL3-210ENST00000523832 RPIAP49247 311 aa7.21□□□□□ -1.26
CDKL3-210ENST00000523832 MSS51Q4VC12 460 aa7.21□□□□□ -1.26
CDKL3-210ENST00000523832 BIN2Q9UBW5 565 aaPredicted RBP7.21□□□□□ -1.26
CDKL3-210ENST00000523832 ARID4BQ4LE39 1312 aaPredicted RBP7.2□□□□□ -1.26
CDKL3-210ENST00000523832 EIF4G2P78344 907 aaKnown RBP eCLIP7.2□□□□□ -1.26
CDKL3-210ENST00000523832 CTDSPL2Q05D32 466 aa7.2□□□□□ -1.26
CDKL3-210ENST00000523832 HIRIP3Q9BW71 556 aaPredicted RBP7.2□□□□□ -1.26
CDKL3-210ENST00000523832 Q3C1V9 767 aa7.19□□□□□ -1.26
CDKL3-210ENST00000523832 DHX37Q8IY37 1157 aaKnown RBP7.19□□□□□ -1.26
CDKL3-210ENST00000523832 PKD2L1Q9P0L9 805 aa7.19□□□□□ -1.26
CDKL3-210ENST00000523832 ZC3H4Q9UPT8 1303 aaKnown RBP7.18□□□□□ -1.26
CDKL3-210ENST00000523832 CD2BP2O95400 341 aaKnown RBP7.18□□□□□ -1.26
CDKL3-210ENST00000523832 ZNF787Q6DD87 383 aa7.18□□□□□ -1.26
CDKL3-210ENST00000523832 HELBQ8NG08 1087 aaPredicted RBP7.18□□□□□ -1.26
CDKL3-210ENST00000523832 FAM187AA6NFU0 413 aa7.17□□□□□ -1.26
CDKL3-210ENST00000523832 RECKO95980 971 aa7.17□□□□□ -1.26
CDKL3-210ENST00000523832 SERPINB4P48594 390 aa7.17□□□□□ -1.26
CDKL3-210ENST00000523832 USP46P62068 366 aa7.17□□□□□ -1.26
CDKL3-210ENST00000523832 FOXC1Q12948 553 aa7.17□□□□□ -1.26
CDKL3-210ENST00000523832 NFATC2IPQ8NCF5 419 aa7.17□□□□□ -1.26
CDKL3-210ENST00000523832 CLP1Q92989 425 aaKnown RBP7.17□□□□□ -1.26
CDKL3-210ENST00000523832 FAM196BA6NMK8 535 aa7.17□□□□□ -1.26
CDKL3-210ENST00000523832 HLA-CQ95604 372 aa7.17□□□□□ -1.26
CDKL3-210ENST00000523832 ZBTB24O43167 697 aaPredicted RBP7.16□□□□□ -1.26
CDKL3-210ENST00000523832 HOXA2O43364 376 aa7.16□□□□□ -1.26
CDKL3-210ENST00000523832 ERCC5P28715 1186 aaPredicted RBP7.16□□□□□ -1.26
CDKL3-210ENST00000523832 MMP16P51512 607 aa7.16□□□□□ -1.26
CDKL3-210ENST00000523832 FBXO33Q7Z6M2 555 aa7.16□□□□□ -1.26
CDKL3-210ENST00000523832 USB1Q9BQ65 265 aaKnown RBP7.16□□□□□ -1.26
CDKL3-210ENST00000523832 GIMAP6Q6P9H5 292 aa7.15□□□□□ -1.27
CDKL3-210ENST00000523832 DPH6Q7L8W6 267 aa7.15□□□□□ -1.27
CDKL3-210ENST00000523832 NOP9Q86U38 636 aaKnown RBP7.15□□□□□ -1.27
CDKL3-210ENST00000523832 LRRN4Q8WUT4 740 aa7.15□□□□□ -1.27
CDKL3-210ENST00000523832 CDCA7Q9BWT1 371 aaPredicted RBP7.15□□□□□ -1.27
CDKL3-210ENST00000523832 FDX1P10109 184 aa7.14□□□□□ -1.27
CDKL3-210ENST00000523832 ATP2B4P23634 1241 aa7.14□□□□□ -1.27
CDKL3-210ENST00000523832 PLEKHM2Q8IWE5 1019 aa7.14□□□□□ -1.27
CDKL3-210ENST00000523832 FAM200AQ8TCP9 573 aa7.14□□□□□ -1.27
CDKL3-210ENST00000523832 USP17L3A6NCW0 530 aa7.13□□□□□ -1.27
CDKL3-210ENST00000523832 USP17L4A6NCW7 530 aa7.13□□□□□ -1.27
CDKL3-210ENST00000523832 LZTS3O60299 673 aaPredicted RBP7.13□□□□□ -1.27
CDKL3-210ENST00000523832 COL19A1Q14993 1142 aa7.13□□□□□ -1.27
CDKL3-210ENST00000523832 TSNAXIP1Q2TAA8 658 aa7.13□□□□□ -1.27
CDKL3-210ENST00000523832 LARP1Q6PKG0 1096 aaKnown RBP7.13□□□□□ -1.27
CDKL3-210ENST00000523832 USP17L2Q6R6M4 530 aa7.13□□□□□ -1.27
CDKL3-210ENST00000523832 USP17L1Q7RTZ2 530 aa7.13□□□□□ -1.27
CDKL3-210ENST00000523832 TOR4AQ9NXH8 423 aa7.13□□□□□ -1.27
CDKL3-210ENST00000523832 SLAIN2Q9P270 581 aa7.13□□□□□ -1.27
CDKL3-210ENST00000523832 USP17L15C9J2P7 530 aa7.12□□□□□ -1.27
CDKL3-210ENST00000523832 USP17L10C9JJH3 530 aa7.12□□□□□ -1.27
CDKL3-210ENST00000523832 USP17L13C9JLJ4 530 aa7.12□□□□□ -1.27
CDKL3-210ENST00000523832 USP17L12C9JPN9 530 aa7.12□□□□□ -1.27
CDKL3-210ENST00000523832 USP17L11C9JVI0 530 aa7.12□□□□□ -1.27
CDKL3-210ENST00000523832 USP17L21D6R901 530 aa7.12□□□□□ -1.27
CDKL3-210ENST00000523832 USP17L18D6R9N7 530 aa7.12□□□□□ -1.27
CDKL3-210ENST00000523832 USP17L22D6RA61 530 aa7.12□□□□□ -1.27
CDKL3-210ENST00000523832 USP17L17D6RBQ6 530 aa7.12□□□□□ -1.27
CDKL3-210ENST00000523832 USP17L19D6RCP7 530 aa7.12□□□□□ -1.27
CDKL3-210ENST00000523832 USP17L20D6RJB6 530 aa7.12□□□□□ -1.27
CDKL3-210ENST00000523832 DXOO77932 396 aaKnown RBP7.12□□□□□ -1.27
CDKL3-210ENST00000523832 GUCA2AQ02747 115 aa7.12□□□□□ -1.27
CDKL3-210ENST00000523832 FAM69CQ0P6D2 419 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms