RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 COL18A1P39060 1754 aa22.16■■□□□ 1.14
TRAPPC9-214ENST00000523777 STRN4Q9NRL3 753 aa22.15■■□□□ 1.14
TRAPPC9-214ENST00000523777 COL5A2P05997 1499 aaPredicted RBP22.14■■□□□ 1.13
TRAPPC9-214ENST00000523777 SPATA31A5Q5VU36 1347 aa22.13■■□□□ 1.13
TRAPPC9-214ENST00000523777 SPATA31A7Q8IWB4 1347 aa22.13■■□□□ 1.13
TRAPPC9-214ENST00000523777 ANKRD26Q9UPS8 1709 aa22.13■■□□□ 1.13
TRAPPC9-214ENST00000523777 BLMP54132 1417 aaPredicted RBP22.12■■□□□ 1.13
TRAPPC9-214ENST00000523777 KIF24Q5T7B8 1368 aa22.12■■□□□ 1.13
TRAPPC9-214ENST00000523777 THRAP3Q9Y2W1 955 aaKnown RBP22.11■■□□□ 1.13
TRAPPC9-214ENST00000523777 GLI3P10071 1580 aa22.11■■□□□ 1.13
TRAPPC9-214ENST00000523777 SPATA31A1Q5TZJ5 1347 aa22.1■■□□□ 1.13
TRAPPC9-214ENST00000523777 ONECUT3O60422 494 aaPredicted RBP22.1■■□□□ 1.13
TRAPPC9-214ENST00000523777 AMPHP49418 695 aa22.1■■□□□ 1.13
TRAPPC9-214ENST00000523777 IP6K1Q92551 441 aa22.1■■□□□ 1.13
TRAPPC9-214ENST00000523777 AXIN2Q9Y2T1 843 aa22.1■■□□□ 1.13
TRAPPC9-214ENST00000523777 RTL1A6NKG5 1358 aa22.1■■□□□ 1.13
TRAPPC9-214ENST00000523777 WDR17Q8IZU2 1322 aa22.09■■□□□ 1.13
TRAPPC9-214ENST00000523777 CRB1P82279 1406 aa22.09■■□□□ 1.13
TRAPPC9-214ENST00000523777 RGPD5Q99666 1765 aa22.09■■□□□ 1.13
TRAPPC9-214ENST00000523777 MAP3K19Q56UN5 1328 aa22.08■■□□□ 1.13
TRAPPC9-214ENST00000523777 PER1O15534 1290 aaPredicted RBP22.08■■□□□ 1.13
TRAPPC9-214ENST00000523777 LARP1Q6PKG0 1096 aaKnown RBP22.08■■□□□ 1.13
TRAPPC9-214ENST00000523777 RGS12O14924 1447 aa22.07■■□□□ 1.12
TRAPPC9-214ENST00000523777 CSB-PGBD3P0DP91 1061 aa22.07■■□□□ 1.12
TRAPPC9-214ENST00000523777 TOM1L2Q6ZVM7 507 aa22.07■■□□□ 1.12
TRAPPC9-214ENST00000523777 TCP11L2Q8N4U5 519 aa22.07■■□□□ 1.12
TRAPPC9-214ENST00000523777 BARGINQ6ZT62 677 aa22.06■■□□□ 1.12
TRAPPC9-214ENST00000523777 MORC1Q86VD1 984 aa22.06■■□□□ 1.12
TRAPPC9-214ENST00000523777 NPC1L1Q9UHC9 1359 aa22.06■■□□□ 1.12
TRAPPC9-214ENST00000523777 HOXC9P31274 260 aa22.05■■□□□ 1.12
TRAPPC9-214ENST00000523777 AMER1Q5JTC6 1135 aaPredicted RBP22.05■■□□□ 1.12
TRAPPC9-214ENST00000523777 ERBB3P21860 1342 aa22.05■■□□□ 1.12
TRAPPC9-214ENST00000523777 MAP2P11137 1827 aaKnown RBP22.04■■□□□ 1.12
TRAPPC9-214ENST00000523777 RRS1Q15050 365 aaKnown RBP22.04■■□□□ 1.12
TRAPPC9-214ENST00000523777 FAM98CQ17RN3 349 aaKnown RBP22.04■■□□□ 1.12
TRAPPC9-214ENST00000523777 CARD10Q9BWT7 1032 aa22.04■■□□□ 1.12
TRAPPC9-214ENST00000523777 FLT4P35916 1363 aa22.03■■□□□ 1.12
TRAPPC9-214ENST00000523777 SOCS7O14512 581 aa22.03■■□□□ 1.12
TRAPPC9-214ENST00000523777 SEPT12Q8IYM1 358 aa22.03■■□□□ 1.12
TRAPPC9-214ENST00000523777 ANKRD24Q8TF21 1146 aa22.03■■□□□ 1.12
TRAPPC9-214ENST00000523777 CDCA7Q9BWT1 371 aaPredicted RBP22.03■■□□□ 1.12
TRAPPC9-214ENST00000523777 USP35Q9P2H5 1018 aa22.03■■□□□ 1.12
TRAPPC9-214ENST00000523777 FAM208AQ9UK61 1670 aaKnown RBP22.03■■□□□ 1.12
TRAPPC9-214ENST00000523777 A0A0G2JS52 829 aa22.02■■□□□ 1.12
TRAPPC9-214ENST00000523777 MYT1Q01538 1121 aa22.02■■□□□ 1.12
TRAPPC9-214ENST00000523777 SMG6Q86US8 1419 aaKnown RBP22.02■■□□□ 1.12
TRAPPC9-214ENST00000523777 FBLN1P23142 703 aa22.01■■□□□ 1.11
TRAPPC9-214ENST00000523777 INSRP06213 1382 aa22■■□□□ 1.11
TRAPPC9-214ENST00000523777 THSD7AQ9UPZ6 1657 aa21.98■■□□□ 1.11
TRAPPC9-214ENST00000523777 TNNT2P45379 298 aaPredicted RBP21.98■■□□□ 1.11
TRAPPC9-214ENST00000523777 NLRP2Q9NX02 1062 aa21.98■■□□□ 1.11
TRAPPC9-214ENST00000523777 POLKQ9UBT6 870 aa21.98■■□□□ 1.11
TRAPPC9-214ENST00000523777 PPM1GO15355 546 aaPredicted RBP21.97■■□□□ 1.11
TRAPPC9-214ENST00000523777 EMILIN1Q9Y6C2 1016 aa21.97■■□□□ 1.11
TRAPPC9-214ENST00000523777 KRT27Q7Z3Y8 459 aa21.96■■□□□ 1.11
TRAPPC9-214ENST00000523777 BRWD3Q6RI45 1802 aa21.95■■□□□ 1.1
TRAPPC9-214ENST00000523777 CC2D1BQ5T0F9 858 aaKnown RBP21.95■■□□□ 1.1
TRAPPC9-214ENST00000523777 LTV1Q96GA3 475 aaPredicted RBP21.95■■□□□ 1.1
TRAPPC9-214ENST00000523777 PEAK1Q9H792 1746 aa21.94■■□□□ 1.1
TRAPPC9-214ENST00000523777 HSP90AB2PQ58FF8 381 aa21.94■■□□□ 1.1
TRAPPC9-214ENST00000523777 PARP4Q9UKK3 1724 aaKnown RBP21.94■■□□□ 1.1
TRAPPC9-214ENST00000523777 PDE3BQ13370 1112 aa21.93■■□□□ 1.1
TRAPPC9-214ENST00000523777 WNK3Q9BYP7 1800 aa21.92■■□□□ 1.1
TRAPPC9-214ENST00000523777 IL2RBP14784 551 aa21.9■■□□□ 1.1
TRAPPC9-214ENST00000523777 DDB1Q16531 1140 aa21.9■■□□□ 1.1
TRAPPC9-214ENST00000523777 CCDC125Q86Z20 511 aa21.89■■□□□ 1.09
TRAPPC9-214ENST00000523777 DISP2A7MBM2 1401 aa21.89■■□□□ 1.09
TRAPPC9-214ENST00000523777 EXOC5O00471 708 aa21.88■■□□□ 1.09
TRAPPC9-214ENST00000523777 DDX10Q13206 875 aaKnown RBP21.88■■□□□ 1.09
TRAPPC9-214ENST00000523777 ZNF316A6NFI3 1004 aaPredicted RBP21.87■■□□□ 1.09
TRAPPC9-214ENST00000523777 NBPF6Q5VWK0 638 aa21.86■■□□□ 1.09
TRAPPC9-214ENST00000523777 FAM196AQ6ZSG2 479 aa21.86■■□□□ 1.09
TRAPPC9-214ENST00000523777 NBPF4Q96M43 638 aa21.86■■□□□ 1.09
TRAPPC9-214ENST00000523777 RGPD2P0DJD1 1756 aa21.86■■□□□ 1.09
TRAPPC9-214ENST00000523777 MTHFSP49914 203 aa21.85■■□□□ 1.09
TRAPPC9-214ENST00000523777 LRRC37A3O60309 1634 aa21.84■■□□□ 1.09
TRAPPC9-214ENST00000523777 RAPGEF4Q8WZA2 1011 aa21.84■■□□□ 1.09
TRAPPC9-214ENST00000523777 UPF1Q92900 1129 aaKnown RBP eCLIP21.84■■□□□ 1.09
TRAPPC9-214ENST00000523777 CNGB1Q14028 1251 aaPredicted RBP21.83■■□□□ 1.09
TRAPPC9-214ENST00000523777 EIF4A2Q14240 407 aaKnown RBP21.83■■□□□ 1.09
TRAPPC9-214ENST00000523777 TNS2Q63HR2 1409 aa21.82■■□□□ 1.08
TRAPPC9-214ENST00000523777 TATP17735 454 aaPredicted RBP21.81■■□□□ 1.08
TRAPPC9-214ENST00000523777 OVOS2A0A0G2JMS6 1433 aa21.8■■□□□ 1.08
TRAPPC9-214ENST00000523777 NCAPD2Q15021 1401 aa21.8■■□□□ 1.08
TRAPPC9-214ENST00000523777 PLEKHG2Q9H7P9 1386 aa21.8■■□□□ 1.08
TRAPPC9-214ENST00000523777 SF3B2Q13435 895 aaKnown RBP21.8■■□□□ 1.08
TRAPPC9-214ENST00000523777 CFAP53Q96M91 514 aa21.8■■□□□ 1.08
TRAPPC9-214ENST00000523777 EYA1Q99502 592 aa21.8■■□□□ 1.08
TRAPPC9-214ENST00000523777 RALBP1Q15311 655 aa21.79■■□□□ 1.08
TRAPPC9-214ENST00000523777 BCL9O00512 1426 aa21.78■■□□□ 1.08
TRAPPC9-214ENST00000523777 IGSF1Q8N6C5 1336 aa21.78■■□□□ 1.08
TRAPPC9-214ENST00000523777 PARD3Q8TEW0 1356 aa21.77■■□□□ 1.08
TRAPPC9-214ENST00000523777 DIAPH1O60610 1272 aaKnown RBP21.77■■□□□ 1.08
TRAPPC9-214ENST00000523777 USHBP1Q8N6Y0 703 aa21.77■■□□□ 1.08
TRAPPC9-214ENST00000523777 ZCRB1Q8TBF4 217 aaKnown RBP21.77■■□□□ 1.08
TRAPPC9-214ENST00000523777 PPP2R1AP30153 589 aa21.76■■□□□ 1.07
TRAPPC9-214ENST00000523777 IL13P35225 146 aa21.76■■□□□ 1.07
TRAPPC9-214ENST00000523777 MARCH10Q8NA82 808 aaPredicted RBP21.75■■□□□ 1.07
TRAPPC9-214ENST00000523777 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.75■■□□□ 1.07
TRAPPC9-214ENST00000523777 MEGF6O75095 1541 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms