RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 OCSTAMPQ9BR26 566 aa9.84□□□□□ -0.83
NSMCE2-211ENST00000523549 TSEN34Q9BSV6 310 aaKnown RBP9.84□□□□□ -0.83
NSMCE2-211ENST00000523549 CARD14Q9BXL6 1004 aa9.84□□□□□ -0.83
NSMCE2-211ENST00000523549 FAM117AQ9C073 453 aa9.84□□□□□ -0.83
NSMCE2-211ENST00000523549 KDM4CQ9H3R0 1056 aa9.84□□□□□ -0.83
NSMCE2-211ENST00000523549 DNMT3LQ9UJW3 386 aa9.84□□□□□ -0.83
NSMCE2-211ENST00000523549 FAM181BA6NEQ2 426 aa9.83□□□□□ -0.84
NSMCE2-211ENST00000523549 PPFIA3O75145 1194 aa9.83□□□□□ -0.84
NSMCE2-211ENST00000523549 PPP1R26Q5T8A7 1209 aaPredicted RBP9.83□□□□□ -0.84
NSMCE2-211ENST00000523549 Q6ZVU0 165 aa9.83□□□□□ -0.84
NSMCE2-211ENST00000523549 GPBP1L1Q9HC44 474 aaPredicted RBP9.83□□□□□ -0.84
NSMCE2-211ENST00000523549 NR6A1Q15406 480 aa9.82□□□□□ -0.84
NSMCE2-211ENST00000523549 ARHGAP9Q9BRR9 750 aa9.82□□□□□ -0.84
NSMCE2-211ENST00000523549 ZC3H4Q9UPT8 1303 aaKnown RBP9.82□□□□□ -0.84
NSMCE2-211ENST00000523549 CBLBQ13191 982 aa9.8□□□□□ -0.84
NSMCE2-211ENST00000523549 DDRGK1Q96HY6 314 aa9.8□□□□□ -0.84
NSMCE2-211ENST00000523549 KCTD15Q96SI1 283 aaPredicted RBP9.8□□□□□ -0.84
NSMCE2-211ENST00000523549 CDV3Q9UKY7 258 aaKnown RBP9.8□□□□□ -0.84
NSMCE2-211ENST00000523549 GPSM3Q9Y4H4 160 aa9.79□□□□□ -0.84
NSMCE2-211ENST00000523549 SPINT1O43278 529 aa9.78□□□□□ -0.84
NSMCE2-211ENST00000523549 PGPEP1Q9NXJ5 209 aa9.78□□□□□ -0.84
NSMCE2-211ENST00000523549 TTLL8A6PVC2 850 aa9.77□□□□□ -0.85
NSMCE2-211ENST00000523549 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.77□□□□□ -0.85
NSMCE2-211ENST00000523549 ZBTB33Q86T24 672 aa9.77□□□□□ -0.85
NSMCE2-211ENST00000523549 EPS8L1Q8TE68 723 aa9.77□□□□□ -0.85
NSMCE2-211ENST00000523549 PTK2Q05397 1052 aa9.76□□□□□ -0.85
NSMCE2-211ENST00000523549 INTS6LQ5JSJ4 861 aaKnown RBP9.76□□□□□ -0.85
NSMCE2-211ENST00000523549 SLC10A4Q96EP9 437 aa9.76□□□□□ -0.85
NSMCE2-211ENST00000523549 AP1G2O75843 785 aa9.75□□□□□ -0.85
NSMCE2-211ENST00000523549 DHX9Q08211 1270 aaKnown RBP9.75□□□□□ -0.85
NSMCE2-211ENST00000523549 GPR161Q8N6U8 529 aaKnown RBP9.75□□□□□ -0.85
NSMCE2-211ENST00000523549 PTSQ03393 145 aa9.74□□□□□ -0.85
NSMCE2-211ENST00000523549 ADAM32Q8TC27 787 aa9.74□□□□□ -0.85
NSMCE2-211ENST00000523549 HMX1Q9NP08 348 aaPredicted RBP9.74□□□□□ -0.85
NSMCE2-211ENST00000523549 FIGNL2A6NMB9 653 aa9.73□□□□□ -0.85
NSMCE2-211ENST00000523549 KRT76Q01546 638 aa9.72□□□□□ -0.85
NSMCE2-211ENST00000523549 NANOS1Q8WY41 292 aaKnown RBP9.72□□□□□ -0.85
NSMCE2-211ENST00000523549 SLC35F4A4IF30 521 aa9.71□□□□□ -0.86
NSMCE2-211ENST00000523549 AGBL1Q96MI9 1066 aa9.71□□□□□ -0.86
NSMCE2-211ENST00000523549 USP17L8P0C7I0 530 aa9.7□□□□□ -0.86
NSMCE2-211ENST00000523549 RFC5P40937 340 aa9.69□□□□□ -0.86
NSMCE2-211ENST00000523549 CTSOP43234 321 aaPredicted RBP9.69□□□□□ -0.86
NSMCE2-211ENST00000523549 CCDC155Q8N6L0 562 aa9.69□□□□□ -0.86
NSMCE2-211ENST00000523549 KDF1Q8NAX2 398 aaPredicted RBP9.69□□□□□ -0.86
NSMCE2-211ENST00000523549 GOPCQ9HD26 462 aa9.69□□□□□ -0.86
NSMCE2-211ENST00000523549 TMPRSS4Q9NRS4 437 aa9.69□□□□□ -0.86
NSMCE2-211ENST00000523549 ESPNB1AK53 854 aa9.68□□□□□ -0.86
NSMCE2-211ENST00000523549 LILRA1O75019 489 aa9.68□□□□□ -0.86
NSMCE2-211ENST00000523549 ATP1B4Q9UN42 357 aaPredicted RBP9.68□□□□□ -0.86
NSMCE2-211ENST00000523549 ADD1P35611 737 aaKnown RBP9.67□□□□□ -0.86
NSMCE2-211ENST00000523549 RELBQ01201 579 aa9.67□□□□□ -0.86
NSMCE2-211ENST00000523549 NBPF20Q3BBV1 942 aa9.67□□□□□ -0.86
NSMCE2-211ENST00000523549 INSM2Q96T92 566 aaPredicted RBP9.67□□□□□ -0.86
NSMCE2-211ENST00000523549 TRIM34Q9BYJ4 488 aa9.67□□□□□ -0.86
NSMCE2-211ENST00000523549 ZNF784Q8NCA9 323 aaPredicted RBP9.66□□□□□ -0.86
NSMCE2-211ENST00000523549 PNMA1Q8ND90 353 aa9.66□□□□□ -0.86
NSMCE2-211ENST00000523549 BCANQ96GW7 911 aa9.66□□□□□ -0.86
NSMCE2-211ENST00000523549 ERVH48-1M5A8F1 160 aa9.65□□□□□ -0.86
NSMCE2-211ENST00000523549 CNTNAP3BQ96NU0 1288 aa9.65□□□□□ -0.86
NSMCE2-211ENST00000523549 CNTNAP3Q9BZ76 1288 aa9.65□□□□□ -0.86
NSMCE2-211ENST00000523549 GSK3AP49840 483 aa9.64□□□□□ -0.87
NSMCE2-211ENST00000523549 DZIP3Q86Y13 1208 aaKnown RBP9.64□□□□□ -0.87
NSMCE2-211ENST00000523549 RNF217Q8TC41 542 aa9.64□□□□□ -0.87
NSMCE2-211ENST00000523549 COL25A1Q9BXS0 654 aaPredicted RBP9.64□□□□□ -0.87
NSMCE2-211ENST00000523549 ZNF395Q9H8N7 513 aaPredicted RBP9.64□□□□□ -0.87
NSMCE2-211ENST00000523549 SENP3-EIF4A1A0A087X0R7 540 aa9.63□□□□□ -0.87
NSMCE2-211ENST00000523549 ADH1AP07327 375 aa9.63□□□□□ -0.87
NSMCE2-211ENST00000523549 KCNMA1Q12791 1236 aa9.63□□□□□ -0.87
NSMCE2-211ENST00000523549 ITGA6P23229 1130 aa9.62□□□□□ -0.87
NSMCE2-211ENST00000523549 PTGIRP43119 386 aa9.62□□□□□ -0.87
NSMCE2-211ENST00000523549 TMEM259Q4ZIN3 620 aa9.62□□□□□ -0.87
NSMCE2-211ENST00000523549 RNFT1Q5M7Z0 435 aa9.62□□□□□ -0.87
NSMCE2-211ENST00000523549 SEPT12Q8IYM1 358 aa9.62□□□□□ -0.87
NSMCE2-211ENST00000523549 FOXD4L5Q5VV16 416 aaPredicted RBP9.61□□□□□ -0.87
NSMCE2-211ENST00000523549 POLMQ9NP87 494 aaPredicted RBP9.61□□□□□ -0.87
NSMCE2-211ENST00000523549 RAB15P59190 212 aa9.6□□□□□ -0.87
NSMCE2-211ENST00000523549 VWA5B2Q8N398 1253 aa9.6□□□□□ -0.87
NSMCE2-211ENST00000523549 GJD4Q96KN9 370 aaPredicted RBP9.6□□□□□ -0.87
NSMCE2-211ENST00000523549 PCMTD1Q96MG8 357 aaPredicted RBP9.59□□□□□ -0.87
NSMCE2-211ENST00000523549 SLURP2P0DP57 97 aa9.58□□□□□ -0.88
NSMCE2-211ENST00000523549 SV2AQ7L0J3 742 aa9.58□□□□□ -0.88
NSMCE2-211ENST00000523549 ZBBXA8MT70 800 aa9.57□□□□□ -0.88
NSMCE2-211ENST00000523549 GIGYF1O75420 1035 aaPredicted RBP9.57□□□□□ -0.88
NSMCE2-211ENST00000523549 ZNF385CQ66K41 422 aaPredicted RBP9.57□□□□□ -0.88
NSMCE2-211ENST00000523549 ADAMTS8Q9UP79 889 aa9.57□□□□□ -0.88
NSMCE2-211ENST00000523549 RNF144AP50876 292 aaPredicted RBP9.56□□□□□ -0.88
NSMCE2-211ENST00000523549 FBXO45P0C2W1 286 aa9.55□□□□□ -0.88
NSMCE2-211ENST00000523549 WHAMMQ8TF30 809 aa9.55□□□□□ -0.88
NSMCE2-211ENST00000523549 CYLDQ9NQC7 956 aa9.55□□□□□ -0.88
NSMCE2-211ENST00000523549 CDC14CA4D256 554 aa9.54□□□□□ -0.88
NSMCE2-211ENST00000523549 ARHGEF15O94989 841 aa9.54□□□□□ -0.88
NSMCE2-211ENST00000523549 LYSMD3Q7Z3D4 306 aa9.54□□□□□ -0.88
NSMCE2-211ENST00000523549 CCDC125Q86Z20 511 aa9.53□□□□□ -0.88
NSMCE2-211ENST00000523549 IL27Q8NEV9 243 aa9.53□□□□□ -0.88
NSMCE2-211ENST00000523549 CUEDC1Q9NWM3 386 aaPredicted RBP9.53□□□□□ -0.88
NSMCE2-211ENST00000523549 TRIM52Q96A61 297 aa9.52□□□□□ -0.89
NSMCE2-211ENST00000523549 GPR37L1O60883 481 aa9.51□□□□□ -0.89
NSMCE2-211ENST00000523549 ERVK-9P63128 1117 aa9.51□□□□□ -0.89
NSMCE2-211ENST00000523549 PCDHB9Q9Y5E1 797 aa9.51□□□□□ -0.89
NSMCE2-211ENST00000523549 ATP5J2-PTCD1G3V325 749 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms