RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 RTL1A6NKG5 1358 aa32.58■■■□□ 2.81
PVT1-212ENST00000521951 FLT4P35916 1363 aa32.58■■■□□ 2.81
PVT1-212ENST00000521951 AXIN2Q9Y2T1 843 aa32.56■■■□□ 2.8
PVT1-212ENST00000521951 COL14A1Q05707 1796 aaKnown RBP32.56■■■□□ 2.8
PVT1-212ENST00000521951 RGPD5Q99666 1765 aa32.56■■■□□ 2.8
PVT1-212ENST00000521951 CDK12Q9NYV4 1490 aaPredicted RBP32.56■■■□□ 2.8
PVT1-212ENST00000521951 HSP90AB2PQ58FF8 381 aa32.56■■■□□ 2.8
PVT1-212ENST00000521951 LMO7Q8WWI1 1683 aa32.55■■■□□ 2.8
PVT1-212ENST00000521951 ABCC6O95255 1503 aa32.55■■■□□ 2.8
PVT1-212ENST00000521951 MEX3CQ5U5Q3 659 aaKnown RBP32.52■■■□□ 2.8
PVT1-212ENST00000521951 C8orf37Q96NL8 207 aa32.51■■■□□ 2.8
PVT1-212ENST00000521951 INSRP06213 1382 aa32.51■■■□□ 2.8
PVT1-212ENST00000521951 CAMTA1Q9Y6Y1 1673 aa32.51■■■□□ 2.8
PVT1-212ENST00000521951 CFAP53Q96M91 514 aa32.51■■■□□ 2.79
PVT1-212ENST00000521951 BLMP54132 1417 aaPredicted RBP32.5■■■□□ 2.79
PVT1-212ENST00000521951 NGLY1Q96IV0 654 aa32.5■■■□□ 2.79
PVT1-212ENST00000521951 CCDC184Q52MB2 194 aa32.49■■■□□ 2.79
PVT1-212ENST00000521951 BTG4Q9NY30 223 aa32.49■■■□□ 2.79
PVT1-212ENST00000521951 PLCH1Q4KWH8 1693 aa32.49■■■□□ 2.79
PVT1-212ENST00000521951 COL3A1P02461 1466 aaPredicted RBP32.47■■■□□ 2.79
PVT1-212ENST00000521951 LTV1Q96GA3 475 aaPredicted RBP32.46■■■□□ 2.79
PVT1-212ENST00000521951 ANKRD24Q8TF21 1146 aa32.46■■■□□ 2.79
PVT1-212ENST00000521951 SLIT2O94813 1529 aa32.45■■■□□ 2.79
PVT1-212ENST00000521951 EIF4A2Q14240 407 aaKnown RBP32.45■■■□□ 2.78
PVT1-212ENST00000521951 DIAPH1O60610 1272 aaKnown RBP32.44■■■□□ 2.78
PVT1-212ENST00000521951 FNBP4Q8N3X1 1017 aaPredicted RBP32.44■■■□□ 2.78
PVT1-212ENST00000521951 NWD2Q9ULI1 1742 aa32.44■■■□□ 2.78
PVT1-212ENST00000521951 CCER2I3L3R5 266 aa32.43■■■□□ 2.78
PVT1-212ENST00000521951 COL5A2P05997 1499 aaPredicted RBP32.43■■■□□ 2.78
PVT1-212ENST00000521951 ERBB3P21860 1342 aa32.42■■■□□ 2.78
PVT1-212ENST00000521951 IL13P35225 146 aa32.41■■■□□ 2.78
PVT1-212ENST00000521951 EVA1CP58658 441 aa32.41■■■□□ 2.78
PVT1-212ENST00000521951 MRS2Q9HD23 443 aa32.41■■■□□ 2.78
PVT1-212ENST00000521951 STRN4Q9NRL3 753 aa32.41■■■□□ 2.78
PVT1-212ENST00000521951 NRAPQ86VF7 1730 aa32.4■■■□□ 2.78
PVT1-212ENST00000521951 AFF2P51816 1311 aa32.39■■■□□ 2.78
PVT1-212ENST00000521951 BCL9LQ86UU0 1499 aa32.38■■■□□ 2.77
PVT1-212ENST00000521951 WDR17Q8IZU2 1322 aa32.37■■■□□ 2.77
PVT1-212ENST00000521951 CSB-PGBD3P0DP91 1061 aa32.37■■■□□ 2.77
PVT1-212ENST00000521951 UNC5CLQ8IV45 518 aa32.37■■■□□ 2.77
PVT1-212ENST00000521951 USP21Q9UK80 565 aa32.36■■■□□ 2.77
PVT1-212ENST00000521951 RGPD2P0DJD1 1756 aa32.36■■■□□ 2.77
PVT1-212ENST00000521951 LARP1Q6PKG0 1096 aaKnown RBP32.36■■■□□ 2.77
PVT1-212ENST00000521951 NUDCQ9Y266 331 aa32.35■■■□□ 2.77
PVT1-212ENST00000521951 EYA1Q99502 592 aa32.34■■■□□ 2.77
PVT1-212ENST00000521951 NBPF6Q5VWK0 638 aa32.33■■■□□ 2.77
PVT1-212ENST00000521951 NBPF4Q96M43 638 aa32.33■■■□□ 2.77
PVT1-212ENST00000521951 FAM208AQ9UK61 1670 aaKnown RBP32.33■■■□□ 2.77
PVT1-212ENST00000521951 U2SURPO15042 1029 aaKnown RBP32.32■■■□□ 2.76
PVT1-212ENST00000521951 TOM1L2Q6ZVM7 507 aa32.32■■■□□ 2.76
PVT1-212ENST00000521951 NLRP2Q9NX02 1062 aa32.32■■■□□ 2.76
PVT1-212ENST00000521951 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.32■■■□□ 2.76
PVT1-212ENST00000521951 RGPD1P0DJD0 1748 aa32.31■■■□□ 2.76
PVT1-212ENST00000521951 PNISRQ8TF01 805 aaKnown RBP32.29■■■□□ 2.76
PVT1-212ENST00000521951 CRB1P82279 1406 aa32.29■■■□□ 2.76
PVT1-212ENST00000521951 IGSF1Q8N6C5 1336 aa32.29■■■□□ 2.76
PVT1-212ENST00000521951 USHBP1Q8N6Y0 703 aa32.27■■■□□ 2.76
PVT1-212ENST00000521951 CARD10Q9BWT7 1032 aa32.27■■■□□ 2.76
PVT1-212ENST00000521951 U2AF1L5P0DN76 240 aaPredicted RBP32.26■■■□□ 2.76
PVT1-212ENST00000521951 U2AF1Q01081 240 aaKnown RBP eCLIP32.26■■■□□ 2.76
PVT1-212ENST00000521951 WDR43Q15061 677 aaKnown RBP eCLIP32.26■■■□□ 2.76
PVT1-212ENST00000521951 VPS72Q15906 364 aa32.26■■■□□ 2.76
PVT1-212ENST00000521951 SULT6B1Q6IMI4 303 aa32.24■■■□□ 2.75
PVT1-212ENST00000521951 SPATA31A5Q5VU36 1347 aa32.24■■■□□ 2.75
PVT1-212ENST00000521951 SPATA31A7Q8IWB4 1347 aa32.24■■■□□ 2.75
PVT1-212ENST00000521951 NCAPD2Q15021 1401 aa32.23■■■□□ 2.75
PVT1-212ENST00000521951 HMOX1P09601 288 aa32.23■■■□□ 2.75
PVT1-212ENST00000521951 CCDC9Q9Y3X0 531 aaKnown RBP32.23■■■□□ 2.75
PVT1-212ENST00000521951 AEBP1Q8IUX7 1158 aa32.22■■■□□ 2.75
PVT1-212ENST00000521951 USP35Q9P2H5 1018 aa32.22■■■□□ 2.75
PVT1-212ENST00000521951 ADAMTS8Q9UP79 889 aa32.22■■■□□ 2.75
PVT1-212ENST00000521951 SPATA31A1Q5TZJ5 1347 aa32.22■■■□□ 2.75
PVT1-212ENST00000521951 ZNF772Q68DY9 489 aaPredicted RBP32.21■■■□□ 2.75
PVT1-212ENST00000521951 TRPC5Q9UL62 973 aaPredicted RBP32.21■■■□□ 2.75
PVT1-212ENST00000521951 ATRNO75882 1429 aa32.21■■■□□ 2.75
PVT1-212ENST00000521951 QTRT2Q9H974 415 aaKnown RBP32.21■■■□□ 2.75
PVT1-212ENST00000521951 KDRP35968 1356 aa32.19■■■□□ 2.74
PVT1-212ENST00000521951 FAM9BQ8IZU0 186 aa32.19■■■□□ 2.74
PVT1-212ENST00000521951 FCHSD2O94868 740 aa32.17■■■□□ 2.74
PVT1-212ENST00000521951 TCP11L2Q8N4U5 519 aa32.17■■■□□ 2.74
PVT1-212ENST00000521951 RGS17Q9UGC6 210 aaPredicted RBP32.17■■■□□ 2.74
PVT1-212ENST00000521951 PHF23Q9BUL5 403 aaPredicted RBP32.16■■■□□ 2.74
PVT1-212ENST00000521951 RSPH6AQ9H0K4 717 aa32.16■■■□□ 2.74
PVT1-212ENST00000521951 GJD4Q96KN9 370 aaPredicted RBP32.16■■■□□ 2.74
PVT1-212ENST00000521951 THRAP3Q9Y2W1 955 aaKnown RBP32.15■■■□□ 2.74
PVT1-212ENST00000521951 GLI3P10071 1580 aa32.12■■■□□ 2.73
PVT1-212ENST00000521951 PRKAR2BP31323 418 aa32.11■■■□□ 2.73
PVT1-212ENST00000521951 RAPGEF4Q8WZA2 1011 aa32.11■■■□□ 2.73
PVT1-212ENST00000521951 BARGINQ6ZT62 677 aa32.1■■■□□ 2.73
PVT1-212ENST00000521951 IL2RBP14784 551 aa32.1■■■□□ 2.73
PVT1-212ENST00000521951 MEGF6O75095 1541 aa32.09■■■□□ 2.73
PVT1-212ENST00000521951 WNK3Q9BYP7 1800 aa32.09■■■□□ 2.73
PVT1-212ENST00000521951 TATP17735 454 aaPredicted RBP32.09■■■□□ 2.73
PVT1-212ENST00000521951 PLEKHF1Q96S99 279 aa32.09■■■□□ 2.73
PVT1-212ENST00000521951 PNNQ9H307 717 aaKnown RBP32.09■■■□□ 2.73
PVT1-212ENST00000521951 DISP2A7MBM2 1401 aa32.08■■■□□ 2.73
PVT1-212ENST00000521951 FAM98CQ17RN3 349 aaKnown RBP32.07■■■□□ 2.72
PVT1-212ENST00000521951 CCDC146Q8IYE0 955 aa32.07■■■□□ 2.72
PVT1-212ENST00000521951 POTEAQ6S8J7 498 aa32.05■■■□□ 2.72
PVT1-212ENST00000521951 PHACTR3Q96KR7 559 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms