RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 PHLPP1O60346 1717 aa20.07■□□□□ 0.8
SREK1-209ENST00000520953 FLT4P35916 1363 aa20.07■□□□□ 0.8
SREK1-209ENST00000520953 ARHGEF25Q86VW2 580 aa20.07■□□□□ 0.8
SREK1-209ENST00000520953 COL16A1Q07092 1604 aaPredicted RBP20.06■□□□□ 0.8
SREK1-209ENST00000520953 SALL2Q9Y467 1007 aaPredicted RBP20.06■□□□□ 0.8
SREK1-209ENST00000520953 LTV1Q96GA3 475 aaPredicted RBP20.05■□□□□ 0.8
SREK1-209ENST00000520953 ABCA3Q99758 1704 aa20.05■□□□□ 0.8
SREK1-209ENST00000520953 AXIN2Q9Y2T1 843 aa20.04■□□□□ 0.8
SREK1-209ENST00000520953 HMOX1P09601 288 aa20.04■□□□□ 0.8
SREK1-209ENST00000520953 CHRNA2Q15822 529 aa20.04■□□□□ 0.8
SREK1-209ENST00000520953 LRRC59Q96AG4 307 aaKnown RBP20.03■□□□□ 0.8
SREK1-209ENST00000520953 KIAA0232Q92628 1395 aa20.03■□□□□ 0.8
SREK1-209ENST00000520953 IP6K1Q92551 441 aa20.02■□□□□ 0.8
SREK1-209ENST00000520953 AEBP1Q8IUX7 1158 aa20.02■□□□□ 0.8
SREK1-209ENST00000520953 NUDCQ9Y266 331 aa20.02■□□□□ 0.8
SREK1-209ENST00000520953 RGPD5Q99666 1765 aa20.01■□□□□ 0.79
SREK1-209ENST00000520953 RTL1A6NKG5 1358 aa20■□□□□ 0.79
SREK1-209ENST00000520953 RGPD1P0DJD0 1748 aa19.99■□□□□ 0.79
SREK1-209ENST00000520953 APAF1O14727 1248 aa19.99■□□□□ 0.79
SREK1-209ENST00000520953 KIF24Q5T7B8 1368 aa19.99■□□□□ 0.79
SREK1-209ENST00000520953 COL18A1P39060 1754 aa19.98■□□□□ 0.79
SREK1-209ENST00000520953 HAP1P54257 671 aaPredicted RBP19.98■□□□□ 0.79
SREK1-209ENST00000520953 PLEKHF1Q96S99 279 aa19.98■□□□□ 0.79
SREK1-209ENST00000520953 EYA1Q99502 592 aa19.98■□□□□ 0.79
SREK1-209ENST00000520953 RSPH6AQ9H0K4 717 aa19.98■□□□□ 0.79
SREK1-209ENST00000520953 RRP7AQ9Y3A4 280 aaKnown RBP19.98■□□□□ 0.79
SREK1-209ENST00000520953 RGPD2P0DJD1 1756 aa19.98■□□□□ 0.79
SREK1-209ENST00000520953 USHBP1Q8N6Y0 703 aa19.97■□□□□ 0.79
SREK1-209ENST00000520953 SULT6B1Q6IMI4 303 aa19.97■□□□□ 0.79
SREK1-209ENST00000520953 PRKAR2BP31323 418 aa19.96■□□□□ 0.79
SREK1-209ENST00000520953 COL22A1Q8NFW1 1626 aaPredicted RBP19.96■□□□□ 0.79
SREK1-209ENST00000520953 CPDO75976 1380 aa19.95■□□□□ 0.78
SREK1-209ENST00000520953 RUNDC1Q96C34 613 aa19.95■□□□□ 0.78
SREK1-209ENST00000520953 PHACTR3Q96KR7 559 aa19.95■□□□□ 0.78
SREK1-209ENST00000520953 ZBED9Q6R2W3 1325 aa19.95■□□□□ 0.78
SREK1-209ENST00000520953 ANKRD24Q8TF21 1146 aa19.94■□□□□ 0.78
SREK1-209ENST00000520953 PRDM11Q9NQV5 511 aa19.94■□□□□ 0.78
SREK1-209ENST00000520953 NEUROD2Q15784 382 aa19.94■□□□□ 0.78
SREK1-209ENST00000520953 NBPF6Q5VWK0 638 aa19.94■□□□□ 0.78
SREK1-209ENST00000520953 TCP11L2Q8N4U5 519 aa19.94■□□□□ 0.78
SREK1-209ENST00000520953 NBPF4Q96M43 638 aa19.94■□□□□ 0.78
SREK1-209ENST00000520953 IGSF1Q8N6C5 1336 aa19.93■□□□□ 0.78
SREK1-209ENST00000520953 HSPA1LP34931 641 aa19.93■□□□□ 0.78
SREK1-209ENST00000520953 FAM83GA6ND36 823 aa19.92■□□□□ 0.78
SREK1-209ENST00000520953 FCHSD2O94868 740 aa19.92■□□□□ 0.78
SREK1-209ENST00000520953 CAMTA1Q9Y6Y1 1673 aa19.92■□□□□ 0.78
SREK1-209ENST00000520953 NUTM2BA6NNL0 878 aaPredicted RBP19.91■□□□□ 0.78
SREK1-209ENST00000520953 NUTM2EB1AL46 878 aaPredicted RBP19.91■□□□□ 0.78
SREK1-209ENST00000520953 NUTM2AQ8IVF1 878 aaPredicted RBP19.91■□□□□ 0.78
SREK1-209ENST00000520953 ERBB3P21860 1342 aa19.91■□□□□ 0.78
SREK1-209ENST00000520953 LMO7Q8WWI1 1683 aa19.91■□□□□ 0.78
SREK1-209ENST00000520953 ADAMTS2O95450 1211 aa19.9■□□□□ 0.78
SREK1-209ENST00000520953 KDRP35968 1356 aa19.88■□□□□ 0.77
SREK1-209ENST00000520953 MAPK8IP3Q9UPT6 1336 aa19.87■□□□□ 0.77
SREK1-209ENST00000520953 CDCA7LQ96GN5 454 aa19.87■□□□□ 0.77
SREK1-209ENST00000520953 TMPOP42166 694 aaKnown RBP19.86■□□□□ 0.77
SREK1-209ENST00000520953 COL5A2P05997 1499 aaPredicted RBP19.85■□□□□ 0.77
SREK1-209ENST00000520953 ZNF521Q96K83 1311 aa19.85■□□□□ 0.77
SREK1-209ENST00000520953 ABCC6O95255 1503 aa19.85■□□□□ 0.77
SREK1-209ENST00000520953 CSB-PGBD3P0DP91 1061 aa19.85■□□□□ 0.77
SREK1-209ENST00000520953 NLRP2Q9NX02 1062 aa19.85■□□□□ 0.77
SREK1-209ENST00000520953 JCADQ9P266 1359 aa19.85■□□□□ 0.77
SREK1-209ENST00000520953 STRN4Q9NRL3 753 aa19.84■□□□□ 0.77
SREK1-209ENST00000520953 BTG4Q9NY30 223 aa19.84■□□□□ 0.77
SREK1-209ENST00000520953 SPINK5Q9NQ38 1064 aaPredicted RBP19.83■□□□□ 0.77
SREK1-209ENST00000520953 SUPT16HQ9Y5B9 1047 aaKnown RBP19.83■□□□□ 0.77
SREK1-209ENST00000520953 TRIM35Q9UPQ4 493 aa19.83■□□□□ 0.76
SREK1-209ENST00000520953 FAM208AQ9UK61 1670 aaKnown RBP19.82■□□□□ 0.76
SREK1-209ENST00000520953 NCAPD2Q15021 1401 aa19.82■□□□□ 0.76
SREK1-209ENST00000520953 RIPK4P57078 832 aa19.82■□□□□ 0.76
SREK1-209ENST00000520953 LARP1Q6PKG0 1096 aaKnown RBP19.82■□□□□ 0.76
SREK1-209ENST00000520953 WWC1Q8IX03 1113 aa19.82■□□□□ 0.76
SREK1-209ENST00000520953 LRP6O75581 1613 aa19.81■□□□□ 0.76
SREK1-209ENST00000520953 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
SREK1-209ENST00000520953 PNNQ9H307 717 aaKnown RBP19.81■□□□□ 0.76
SREK1-209ENST00000520953 COL14A1Q05707 1796 aaKnown RBP19.81■□□□□ 0.76
SREK1-209ENST00000520953 DLG5Q8TDM6 1919 aa19.81■□□□□ 0.76
SREK1-209ENST00000520953 NFE2L2Q16236 605 aa19.81■□□□□ 0.76
SREK1-209ENST00000520953 MTHFSDQ2M296 383 aaKnown RBP19.81■□□□□ 0.76
SREK1-209ENST00000520953 WDR17Q8IZU2 1322 aa19.8■□□□□ 0.76
SREK1-209ENST00000520953 THUMPD2Q9BTF0 503 aaKnown RBP19.8■□□□□ 0.76
SREK1-209ENST00000520953 PLCH1Q4KWH8 1693 aa19.79■□□□□ 0.76
SREK1-209ENST00000520953 TOM1L2Q6ZVM7 507 aa19.78■□□□□ 0.76
SREK1-209ENST00000520953 NEFMP07197 916 aa19.78■□□□□ 0.76
SREK1-209ENST00000520953 DCTN1Q14203 1278 aa19.78■□□□□ 0.76
SREK1-209ENST00000520953 EVA1CP58658 441 aa19.77■□□□□ 0.76
SREK1-209ENST00000520953 MEGF6O75095 1541 aa19.77■□□□□ 0.76
SREK1-209ENST00000520953 USP35Q9P2H5 1018 aa19.77■□□□□ 0.75
SREK1-209ENST00000520953 CCDC27Q2M243 656 aa19.75■□□□□ 0.75
SREK1-209ENST00000520953 C8orf37Q96NL8 207 aa19.75■□□□□ 0.75
SREK1-209ENST00000520953 GOLGA2Q08379 1002 aa19.74■□□□□ 0.75
SREK1-209ENST00000520953 NRAPQ86VF7 1730 aa19.74■□□□□ 0.75
SREK1-209ENST00000520953 MCM10Q7L590 875 aa19.73■□□□□ 0.75
SREK1-209ENST00000520953 SPATA31A6Q5VVP1 1343 aa19.73■□□□□ 0.75
SREK1-209ENST00000520953 SLFN5Q08AF3 891 aa19.72■□□□□ 0.75
SREK1-209ENST00000520953 SLIT2O94813 1529 aa19.72■□□□□ 0.75
SREK1-209ENST00000520953 CARD10Q9BWT7 1032 aa19.71■□□□□ 0.75
SREK1-209ENST00000520953 CRB1P82279 1406 aa19.71■□□□□ 0.75
SREK1-209ENST00000520953 PDE3BQ13370 1112 aa19.71■□□□□ 0.75
SREK1-209ENST00000520953 NGEFQ8N5V2 710 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms