RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 NR3C2P08235 984 aa11.07□□□□□ -0.64
PABPC1-216ENST00000520868 GRM5P41594 1212 aa11.07□□□□□ -0.64
PABPC1-216ENST00000520868 PDS5BQ9NTI5 1447 aa11.07□□□□□ -0.64
PABPC1-216ENST00000520868 LAMC3Q9Y6N6 1575 aa11.07□□□□□ -0.64
PABPC1-216ENST00000520868 BANK1Q8NDB2 785 aa11.06□□□□□ -0.64
PABPC1-216ENST00000520868 OCSTAMPQ9BR26 566 aa11.06□□□□□ -0.64
PABPC1-216ENST00000520868 THOC2Q8NI27 1593 aaKnown RBP11.06□□□□□ -0.64
PABPC1-216ENST00000520868 TIMP2P16035 220 aa11.05□□□□□ -0.64
PABPC1-216ENST00000520868 KLF16Q9BXK1 252 aaPredicted RBP11.05□□□□□ -0.64
PABPC1-216ENST00000520868 WDR4P57081 412 aaKnown RBP11.04□□□□□ -0.64
PABPC1-216ENST00000520868 ARHGAP9Q9BRR9 750 aa11.04□□□□□ -0.64
PABPC1-216ENST00000520868 GPSM3Q9Y4H4 160 aa11.04□□□□□ -0.64
PABPC1-216ENST00000520868 PTK2Q05397 1052 aa11.03□□□□□ -0.64
PABPC1-216ENST00000520868 ERFEQ4G0M1 354 aa11.03□□□□□ -0.64
PABPC1-216ENST00000520868 TRMT44Q8IYL2 757 aaKnown RBP11.03□□□□□ -0.64
PABPC1-216ENST00000520868 TRIM47Q96LD4 638 aa11.03□□□□□ -0.64
PABPC1-216ENST00000520868 ZFAND3Q9H8U3 227 aa11.03□□□□□ -0.64
PABPC1-216ENST00000520868 CADPSQ9ULU8 1353 aa11.03□□□□□ -0.64
PABPC1-216ENST00000520868 SOCS7O14512 581 aa11.02□□□□□ -0.65
PABPC1-216ENST00000520868 KIF21AQ7Z4S6 1674 aa11.01□□□□□ -0.65
PABPC1-216ENST00000520868 APBB1O00213 710 aa11.01□□□□□ -0.65
PABPC1-216ENST00000520868 FSHRP23945 695 aa11.01□□□□□ -0.65
PABPC1-216ENST00000520868 NR5A1Q13285 461 aa11.01□□□□□ -0.65
PABPC1-216ENST00000520868 ITPKCQ96DU7 683 aa11.01□□□□□ -0.65
PABPC1-216ENST00000520868 TRIM34Q9BYJ4 488 aa11.01□□□□□ -0.65
PABPC1-216ENST00000520868 MAP4K5Q9Y4K4 846 aa11.01□□□□□ -0.65
PABPC1-216ENST00000520868 VASH1Q7L8A9 365 aaPredicted RBP11□□□□□ -0.65
PABPC1-216ENST00000520868 ZBTB33Q86T24 672 aa11□□□□□ -0.65
PABPC1-216ENST00000520868 ZIC2O95409 532 aaPredicted RBP10.99□□□□□ -0.65
PABPC1-216ENST00000520868 CDV3Q9UKY7 258 aaKnown RBP10.99□□□□□ -0.65
PABPC1-216ENST00000520868 SLC10A4Q96EP9 437 aa10.98□□□□□ -0.65
PABPC1-216ENST00000520868 GJD4Q96KN9 370 aaPredicted RBP10.97□□□□□ -0.65
PABPC1-216ENST00000520868 ZFP42Q96MM3 310 aa10.97□□□□□ -0.65
PABPC1-216ENST00000520868 SENP2Q9HC62 589 aa10.97□□□□□ -0.65
PABPC1-216ENST00000520868 MRC2Q9UBG0 1479 aa10.96□□□□□ -0.65
PABPC1-216ENST00000520868 MRPL14Q6P1L8 145 aaKnown RBP10.95□□□□□ -0.66
PABPC1-216ENST00000520868 ADAM32Q8TC27 787 aa10.95□□□□□ -0.66
PABPC1-216ENST00000520868 PURBQ96QR8 312 aaKnown RBP10.95□□□□□ -0.66
PABPC1-216ENST00000520868 WIZO95785 1651 aa10.95□□□□□ -0.66
PABPC1-216ENST00000520868 SOBPA7XYQ1 873 aa10.93□□□□□ -0.66
PABPC1-216ENST00000520868 LCE2AQ5TA79 106 aaPredicted RBP10.93□□□□□ -0.66
PABPC1-216ENST00000520868 MTMR14Q8NCE2 650 aa10.93□□□□□ -0.66
PABPC1-216ENST00000520868 KIFC2Q96AC6 838 aa10.93□□□□□ -0.66
PABPC1-216ENST00000520868 LCE2CQ5TA81 110 aa10.92□□□□□ -0.66
PABPC1-216ENST00000520868 CCDC116Q8IYX3 515 aa10.92□□□□□ -0.66
PABPC1-216ENST00000520868 KCTD15Q96SI1 283 aaPredicted RBP10.92□□□□□ -0.66
PABPC1-216ENST00000520868 NDUFB9Q9Y6M9 179 aa10.92□□□□□ -0.66
PABPC1-216ENST00000520868 ZBBXA8MT70 800 aa10.91□□□□□ -0.66
PABPC1-216ENST00000520868 NBPF20Q3BBV1 942 aa10.91□□□□□ -0.66
PABPC1-216ENST00000520868 C6orf118Q5T5N4 469 aa10.91□□□□□ -0.66
PABPC1-216ENST00000520868 TREML4Q6UXN2 200 aa10.91□□□□□ -0.66
PABPC1-216ENST00000520868 PRM3Q9NNZ6 103 aa10.91□□□□□ -0.66
PABPC1-216ENST00000520868 SNRKQ9NRH2 765 aa10.91□□□□□ -0.66
PABPC1-216ENST00000520868 WDR62O43379 1518 aa10.9□□□□□ -0.66
PABPC1-216ENST00000520868 NFX1Q12986 1120 aaKnown RBP10.9□□□□□ -0.66
PABPC1-216ENST00000520868 DZIP3Q86Y13 1208 aaKnown RBP10.9□□□□□ -0.66
PABPC1-216ENST00000520868 EMILIN1Q9Y6C2 1016 aa10.9□□□□□ -0.66
PABPC1-216ENST00000520868 CEP164Q9UPV0 1460 aa10.89□□□□□ -0.67
PABPC1-216ENST00000520868 CBLBQ13191 982 aa10.89□□□□□ -0.67
PABPC1-216ENST00000520868 INTS6LQ5JSJ4 861 aaKnown RBP10.89□□□□□ -0.67
PABPC1-216ENST00000520868 PPP1R26Q5T8A7 1209 aaPredicted RBP10.89□□□□□ -0.67
PABPC1-216ENST00000520868 FANCD2Q9BXW9 1451 aa10.88□□□□□ -0.67
PABPC1-216ENST00000520868 GPR37L1O60883 481 aa10.88□□□□□ -0.67
PABPC1-216ENST00000520868 RAB15P59190 212 aa10.88□□□□□ -0.67
PABPC1-216ENST00000520868 DHX9Q08211 1270 aaKnown RBP10.88□□□□□ -0.67
PABPC1-216ENST00000520868 MEIOBQ8N635 442 aa10.88□□□□□ -0.67
PABPC1-216ENST00000520868 ZNF592Q92610 1267 aa10.88□□□□□ -0.67
PABPC1-216ENST00000520868 VEGFBP49765 207 aa10.87□□□□□ -0.67
PABPC1-216ENST00000520868 SCARF1Q14162 830 aa10.87□□□□□ -0.67
PABPC1-216ENST00000520868 TERTO14746 1132 aaKnown RBP10.86□□□□□ -0.67
PABPC1-216ENST00000520868 WFS1O76024 890 aa10.86□□□□□ -0.67
PABPC1-216ENST00000520868 FBXO45P0C2W1 286 aa10.86□□□□□ -0.67
PABPC1-216ENST00000520868 LINC00528Q8N1L1 170 aa10.86□□□□□ -0.67
PABPC1-216ENST00000520868 PGPEP1Q9NXJ5 209 aa10.86□□□□□ -0.67
PABPC1-216ENST00000520868 ZNF330Q9Y3S2 320 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-216ENST00000520868 RSF1Q96T23 1441 aaPredicted RBP10.85□□□□□ -0.67
PABPC1-216ENST00000520868 BMP2P12643 396 aa10.85□□□□□ -0.67
PABPC1-216ENST00000520868 MCCD1P59942 119 aaPredicted RBP10.85□□□□□ -0.67
PABPC1-216ENST00000520868 TMPRSS4Q9NRS4 437 aa10.85□□□□□ -0.67
PABPC1-216ENST00000520868 CFTRP13569 1480 aa10.85□□□□□ -0.67
PABPC1-216ENST00000520868 NR1H3Q13133 447 aa10.84□□□□□ -0.67
PABPC1-216ENST00000520868 TRIM52Q96A61 297 aa10.84□□□□□ -0.67
PABPC1-216ENST00000520868 AGBL1Q96MI9 1066 aa10.83□□□□□ -0.68
PABPC1-216ENST00000520868 UPP2O95045 317 aa10.82□□□□□ -0.68
PABPC1-216ENST00000520868 SEPT12Q8IYM1 358 aa10.82□□□□□ -0.68
PABPC1-216ENST00000520868 PCDHB9Q9Y5E1 797 aa10.82□□□□□ -0.68
PABPC1-216ENST00000520868 TMEM132AQ24JP5 1023 aa10.81□□□□□ -0.68
PABPC1-216ENST00000520868 ERVH48-1M5A8F1 160 aa10.8□□□□□ -0.68
PABPC1-216ENST00000520868 Q6ZVU0 165 aa10.8□□□□□ -0.68
PABPC1-216ENST00000520868 CCDC125Q86Z20 511 aa10.8□□□□□ -0.68
PABPC1-216ENST00000520868 NXF1Q9UBU9 619 aaKnown RBP10.8□□□□□ -0.68
PABPC1-216ENST00000520868 URB2Q14146 1524 aaKnown RBP10.79□□□□□ -0.68
PABPC1-216ENST00000520868 ESPNB1AK53 854 aa10.79□□□□□ -0.68
PABPC1-216ENST00000520868 ZNF784Q8NCA9 323 aaPredicted RBP10.79□□□□□ -0.68
PABPC1-216ENST00000520868 TBC1D2BQ9UPU7 963 aa10.79□□□□□ -0.68
PABPC1-216ENST00000520868 TOP2AP11388 1531 aaKnown RBP10.79□□□□□ -0.68
PABPC1-216ENST00000520868 GIGYF1O75420 1035 aaPredicted RBP10.78□□□□□ -0.68
PABPC1-216ENST00000520868 MCM6Q14566 821 aa10.78□□□□□ -0.68
PABPC1-216ENST00000520868 TSEN34Q9BSV6 310 aaKnown RBP10.78□□□□□ -0.68
PABPC1-216ENST00000520868 DNMT3LQ9UJW3 386 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms