RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 CBLBQ13191 982 aa8.96□□□□□ -0.98
HDAC2-208ENST00000520746 GPR161Q8N6U8 529 aaKnown RBP8.96□□□□□ -0.98
HDAC2-208ENST00000520746 PTSQ03393 145 aa8.95□□□□□ -0.98
HDAC2-208ENST00000520746 Q6ZVU0 165 aa8.95□□□□□ -0.98
HDAC2-208ENST00000520746 RSPH6AQ9H0K4 717 aa8.95□□□□□ -0.98
HDAC2-208ENST00000520746 FIGNL2A6NMB9 653 aa8.94□□□□□ -0.98
HDAC2-208ENST00000520746 PDXDC2PQ6P474 469 aa8.94□□□□□ -0.98
HDAC2-208ENST00000520746 LRRN4Q8WUT4 740 aa8.94□□□□□ -0.98
HDAC2-208ENST00000520746 ARHGAP9Q9BRR9 750 aa8.94□□□□□ -0.98
HDAC2-208ENST00000520746 PGPEP1Q9NXJ5 209 aa8.94□□□□□ -0.98
HDAC2-208ENST00000520746 SPINT1O43278 529 aa8.93□□□□□ -0.98
HDAC2-208ENST00000520746 KCTD15Q96SI1 283 aaPredicted RBP8.93□□□□□ -0.98
HDAC2-208ENST00000520746 FKBPLQ9UIM3 349 aa8.93□□□□□ -0.98
HDAC2-208ENST00000520746 GSK3AP49840 483 aa8.92□□□□□ -0.98
HDAC2-208ENST00000520746 KCNMA1Q12791 1236 aa8.92□□□□□ -0.98
HDAC2-208ENST00000520746 FBXO31Q5XUX0 539 aaPredicted RBP8.92□□□□□ -0.98
HDAC2-208ENST00000520746 SLC10A4Q96EP9 437 aa8.92□□□□□ -0.98
HDAC2-208ENST00000520746 CNTNAP3BQ96NU0 1288 aa8.92□□□□□ -0.98
HDAC2-208ENST00000520746 CNTNAP3Q9BZ76 1288 aa8.92□□□□□ -0.98
HDAC2-208ENST00000520746 CDV3Q9UKY7 258 aaKnown RBP8.91□□□□□ -0.98
HDAC2-208ENST00000520746 NR6A1Q15406 480 aa8.9□□□□□ -0.98
HDAC2-208ENST00000520746 CCDC155Q8N6L0 562 aa8.9□□□□□ -0.98
HDAC2-208ENST00000520746 NANOS1Q8WY41 292 aaKnown RBP8.9□□□□□ -0.98
HDAC2-208ENST00000520746 OCSTAMPQ9BR26 566 aa8.9□□□□□ -0.98
HDAC2-208ENST00000520746 INTS6LQ5JSJ4 861 aaKnown RBP8.89□□□□□ -0.99
HDAC2-208ENST00000520746 ZBTB33Q86T24 672 aa8.89□□□□□ -0.99
HDAC2-208ENST00000520746 AGBL1Q96MI9 1066 aa8.89□□□□□ -0.99
HDAC2-208ENST00000520746 COL25A1Q9BXS0 654 aaPredicted RBP8.89□□□□□ -0.99
HDAC2-208ENST00000520746 ZC3H4Q9UPT8 1303 aaKnown RBP8.88□□□□□ -0.99
HDAC2-208ENST00000520746 SLC35F4A4IF30 521 aa8.88□□□□□ -0.99
HDAC2-208ENST00000520746 CTSOP43234 321 aaPredicted RBP8.88□□□□□ -0.99
HDAC2-208ENST00000520746 DHX9Q08211 1270 aaKnown RBP8.88□□□□□ -0.99
HDAC2-208ENST00000520746 LOC100996750A0A140TA64 210 aa8.87□□□□□ -0.99
HDAC2-208ENST00000520746 RNFT1Q5M7Z0 435 aa8.87□□□□□ -0.99
HDAC2-208ENST00000520746 KRTAP4-6Q9BYQ5 205 aa8.87□□□□□ -0.99
HDAC2-208ENST00000520746 RELBQ01201 579 aa8.86□□□□□ -0.99
HDAC2-208ENST00000520746 SKIV2LQ15477 1246 aaKnown RBP8.86□□□□□ -0.99
HDAC2-208ENST00000520746 KCTD17Q8N5Z5 321 aa8.86□□□□□ -0.99
HDAC2-208ENST00000520746 PROCA1Q8NCQ7 364 aaPredicted RBP8.86□□□□□ -0.99
HDAC2-208ENST00000520746 INSM2Q96T92 566 aaPredicted RBP8.86□□□□□ -0.99
HDAC2-208ENST00000520746 ADAMTS8Q9UP79 889 aa8.86□□□□□ -0.99
HDAC2-208ENST00000520746 ITGA6P23229 1130 aa8.85□□□□□ -0.99
HDAC2-208ENST00000520746 SH3D19Q5HYK7 790 aa8.85□□□□□ -0.99
HDAC2-208ENST00000520746 PPP2R2DQ66LE6 453 aa8.85□□□□□ -0.99
HDAC2-208ENST00000520746 ADAM32Q8TC27 787 aa8.85□□□□□ -0.99
HDAC2-208ENST00000520746 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.85□□□□□ -0.99
HDAC2-208ENST00000520746 PTK2Q05397 1052 aa8.84□□□□□ -0.99
HDAC2-208ENST00000520746 ZNF385CQ66K41 422 aaPredicted RBP8.84□□□□□ -0.99
HDAC2-208ENST00000520746 VWA5B2Q8N398 1253 aa8.83□□□□□ -1
HDAC2-208ENST00000520746 RNF217Q8TC41 542 aa8.83□□□□□ -1
HDAC2-208ENST00000520746 EPS8L1Q8TE68 723 aa8.83□□□□□ -1
HDAC2-208ENST00000520746 TMPRSS4Q9NRS4 437 aa8.83□□□□□ -1
HDAC2-208ENST00000520746 GPSM3Q9Y4H4 160 aa8.83□□□□□ -1
HDAC2-208ENST00000520746 CDC14CA4D256 554 aa8.82□□□□□ -1
HDAC2-208ENST00000520746 RASSF7Q02833 373 aa8.82□□□□□ -1
HDAC2-208ENST00000520746 TMEM151AQ8N4L1 468 aa8.82□□□□□ -1
HDAC2-208ENST00000520746 ZNF784Q8NCA9 323 aaPredicted RBP8.82□□□□□ -1
HDAC2-208ENST00000520746 WHAMMQ8TF30 809 aa8.82□□□□□ -1
HDAC2-208ENST00000520746 ZNF395Q9H8N7 513 aaPredicted RBP8.82□□□□□ -1
HDAC2-208ENST00000520746 POLMQ9NP87 494 aaPredicted RBP8.82□□□□□ -1
HDAC2-208ENST00000520746 SENP3-EIF4A1A0A087X0R7 540 aa8.81□□□□□ -1
HDAC2-208ENST00000520746 AP1G2O75843 785 aa8.81□□□□□ -1
HDAC2-208ENST00000520746 SLURP2P0DP57 97 aa8.81□□□□□ -1
HDAC2-208ENST00000520746 NBPF20Q3BBV1 942 aa8.81□□□□□ -1
HDAC2-208ENST00000520746 SV2AQ7L0J3 742 aa8.81□□□□□ -1
HDAC2-208ENST00000520746 SVOPQ8N4V2 548 aa8.81□□□□□ -1
HDAC2-208ENST00000520746 GPBP1L1Q9HC44 474 aaPredicted RBP8.81□□□□□ -1
HDAC2-208ENST00000520746 HMX1Q9NP08 348 aaPredicted RBP8.81□□□□□ -1
HDAC2-208ENST00000520746 RNF225M0QZC1 329 aaPredicted RBP8.8□□□□□ -1
HDAC2-208ENST00000520746 GDF11O95390 407 aa8.8□□□□□ -1
HDAC2-208ENST00000520746 ADH1AP07327 375 aa8.8□□□□□ -1
HDAC2-208ENST00000520746 RAB15P59190 212 aa8.8□□□□□ -1
HDAC2-208ENST00000520746 SUZ12Q15022 739 aaKnown RBP8.8□□□□□ -1
HDAC2-208ENST00000520746 FOXD4L5Q5VV16 416 aaPredicted RBP8.8□□□□□ -1
HDAC2-208ENST00000520746 FAM117AQ9C073 453 aa8.8□□□□□ -1
HDAC2-208ENST00000520746 LILRA1O75019 489 aa8.79□□□□□ -1
HDAC2-208ENST00000520746 ADD1P35611 737 aaKnown RBP8.79□□□□□ -1
HDAC2-208ENST00000520746 KDF1Q8NAX2 398 aaPredicted RBP8.79□□□□□ -1
HDAC2-208ENST00000520746 KDM4CQ9H3R0 1056 aa8.79□□□□□ -1
HDAC2-208ENST00000520746 ERVH48-1M5A8F1 160 aa8.78□□□□□ -1
HDAC2-208ENST00000520746 ARHGEF15O94989 841 aa8.78□□□□□ -1
HDAC2-208ENST00000520746 USP17L8P0C7I0 530 aa8.78□□□□□ -1
HDAC2-208ENST00000520746 DDRGK1Q96HY6 314 aa8.78□□□□□ -1
HDAC2-208ENST00000520746 ATP1B4Q9UN42 357 aaPredicted RBP8.78□□□□□ -1
HDAC2-208ENST00000520746 ESPNB1AK53 854 aa8.77□□□□□ -1.01
HDAC2-208ENST00000520746 PTGIRP43119 386 aa8.77□□□□□ -1.01
HDAC2-208ENST00000520746 DZIP3Q86Y13 1208 aaKnown RBP8.77□□□□□ -1.01
HDAC2-208ENST00000520746 PNMA1Q8ND90 353 aa8.75□□□□□ -1.01
HDAC2-208ENST00000520746 CUEDC1Q9NWM3 386 aaPredicted RBP8.75□□□□□ -1.01
HDAC2-208ENST00000520746 ADAMTS2O95450 1211 aa8.73□□□□□ -1.01
HDAC2-208ENST00000520746 IRS1P35568 1242 aa8.73□□□□□ -1.01
HDAC2-208ENST00000520746 GAS6Q14393 721 aa8.73□□□□□ -1.01
HDAC2-208ENST00000520746 LYSMD3Q7Z3D4 306 aa8.73□□□□□ -1.01
HDAC2-208ENST00000520746 RFC5P40937 340 aa8.72□□□□□ -1.01
HDAC2-208ENST00000520746 CYLDQ9NQC7 956 aa8.72□□□□□ -1.01
HDAC2-208ENST00000520746 LYPD4Q6UWN0 246 aa8.71□□□□□ -1.02
HDAC2-208ENST00000520746 SEPT12Q8IYM1 358 aa8.71□□□□□ -1.02
HDAC2-208ENST00000520746 TRIM34Q9BYJ4 488 aa8.71□□□□□ -1.02
HDAC2-208ENST00000520746 RHOQP17081 205 aa8.7□□□□□ -1.02
HDAC2-208ENST00000520746 RNF144AP50876 292 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms