RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 COL14A1Q05707 1796 aaKnown RBP13.25□□□□□ -0.29
SCARNA16-201ENST00000515981 LARP1Q6PKG0 1096 aaKnown RBP13.25□□□□□ -0.29
SCARNA16-201ENST00000515981 IP6K1Q92551 441 aa13.25□□□□□ -0.29
SCARNA16-201ENST00000515981 POLKQ9UBT6 870 aa13.25□□□□□ -0.29
SCARNA16-201ENST00000515981 TRPC5Q9UL62 973 aaPredicted RBP13.25□□□□□ -0.29
SCARNA16-201ENST00000515981 COL18A1P39060 1754 aa13.25□□□□□ -0.29
SCARNA16-201ENST00000515981 PLCH1Q4KWH8 1693 aa13.24□□□□□ -0.29
SCARNA16-201ENST00000515981 NSD2O96028 1365 aa13.24□□□□□ -0.29
SCARNA16-201ENST00000515981 HOXC9P31274 260 aa13.24□□□□□ -0.29
SCARNA16-201ENST00000515981 HSP90AB2PQ58FF8 381 aa13.24□□□□□ -0.29
SCARNA16-201ENST00000515981 RGPD5Q99666 1765 aa13.24□□□□□ -0.29
SCARNA16-201ENST00000515981 VPS72Q15906 364 aa13.23□□□□□ -0.29
SCARNA16-201ENST00000515981 GJD4Q96KN9 370 aaPredicted RBP13.23□□□□□ -0.29
SCARNA16-201ENST00000515981 USP35Q9P2H5 1018 aa13.23□□□□□ -0.29
SCARNA16-201ENST00000515981 ATRNO75882 1429 aa13.22□□□□□ -0.29
SCARNA16-201ENST00000515981 LTN1O94822 1766 aa13.22□□□□□ -0.29
SCARNA16-201ENST00000515981 CSB-PGBD3P0DP91 1061 aa13.22□□□□□ -0.29
SCARNA16-201ENST00000515981 RXRBP28702 533 aa13.22□□□□□ -0.29
SCARNA16-201ENST00000515981 ILDR2Q71H61 639 aa13.22□□□□□ -0.29
SCARNA16-201ENST00000515981 ANKRD24Q8TF21 1146 aa13.22□□□□□ -0.29
SCARNA16-201ENST00000515981 MAP2P11137 1827 aaKnown RBP13.22□□□□□ -0.29
SCARNA16-201ENST00000515981 LMO7Q8WWI1 1683 aa13.21□□□□□ -0.29
SCARNA16-201ENST00000515981 NPC1L1Q9UHC9 1359 aa13.21□□□□□ -0.29
SCARNA16-201ENST00000515981 SPATA31A5Q5VU36 1347 aa13.21□□□□□ -0.29
SCARNA16-201ENST00000515981 SPATA31A7Q8IWB4 1347 aa13.21□□□□□ -0.29
SCARNA16-201ENST00000515981 RBM6P78332 1123 aaKnown RBP13.21□□□□□ -0.29
SCARNA16-201ENST00000515981 ANKRD26Q9UPS8 1709 aa13.21□□□□□ -0.3
SCARNA16-201ENST00000515981 NRAPQ86VF7 1730 aa13.2□□□□□ -0.3
SCARNA16-201ENST00000515981 PEAK1Q9H792 1746 aa13.2□□□□□ -0.3
SCARNA16-201ENST00000515981 NWD2Q9ULI1 1742 aa13.2□□□□□ -0.3
SCARNA16-201ENST00000515981 TOM1L2Q6ZVM7 507 aa13.2□□□□□ -0.3
SCARNA16-201ENST00000515981 COL5A2P05997 1499 aaPredicted RBP13.2□□□□□ -0.3
SCARNA16-201ENST00000515981 SPATA31A1Q5TZJ5 1347 aa13.19□□□□□ -0.3
SCARNA16-201ENST00000515981 MTHFSP49914 203 aa13.19□□□□□ -0.3
SCARNA16-201ENST00000515981 FAM98CQ17RN3 349 aaKnown RBP13.19□□□□□ -0.3
SCARNA16-201ENST00000515981 NLRP2Q9NX02 1062 aa13.19□□□□□ -0.3
SCARNA16-201ENST00000515981 WDR17Q8IZU2 1322 aa13.18□□□□□ -0.3
SCARNA16-201ENST00000515981 PPP2R1AP30153 589 aa13.18□□□□□ -0.3
SCARNA16-201ENST00000515981 FLT4P35916 1363 aa13.18□□□□□ -0.3
SCARNA16-201ENST00000515981 ERBB3P21860 1342 aa13.17□□□□□ -0.3
SCARNA16-201ENST00000515981 NBPF6Q5VWK0 638 aa13.17□□□□□ -0.3
SCARNA16-201ENST00000515981 USHBP1Q8N6Y0 703 aa13.17□□□□□ -0.3
SCARNA16-201ENST00000515981 NBPF4Q96M43 638 aa13.17□□□□□ -0.3
SCARNA16-201ENST00000515981 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.16□□□□□ -0.3
SCARNA16-201ENST00000515981 GLI3P10071 1580 aa13.16□□□□□ -0.3
SCARNA16-201ENST00000515981 EIF4A2Q14240 407 aaKnown RBP13.16□□□□□ -0.3
SCARNA16-201ENST00000515981 TCP11L2Q8N4U5 519 aa13.16□□□□□ -0.3
SCARNA16-201ENST00000515981 CARD10Q9BWT7 1032 aa13.16□□□□□ -0.3
SCARNA16-201ENST00000515981 RTL1A6NKG5 1358 aa13.16□□□□□ -0.3
SCARNA16-201ENST00000515981 INSRP06213 1382 aa13.16□□□□□ -0.3
SCARNA16-201ENST00000515981 BLMP54132 1417 aaPredicted RBP13.15□□□□□ -0.3
SCARNA16-201ENST00000515981 CRB1P82279 1406 aa13.15□□□□□ -0.3
SCARNA16-201ENST00000515981 A0A0G2JS52 829 aa13.15□□□□□ -0.3
SCARNA16-201ENST00000515981 MYT1Q01538 1121 aa13.15□□□□□ -0.3
SCARNA16-201ENST00000515981 SEPT12Q8IYM1 358 aa13.15□□□□□ -0.3
SCARNA16-201ENST00000515981 PARD3Q8TEW0 1356 aa13.14□□□□□ -0.31
SCARNA16-201ENST00000515981 RGPD2P0DJD1 1756 aa13.14□□□□□ -0.31
SCARNA16-201ENST00000515981 KIF24Q5T7B8 1368 aa13.13□□□□□ -0.31
SCARNA16-201ENST00000515981 ONECUT3O60422 494 aaPredicted RBP13.13□□□□□ -0.31
SCARNA16-201ENST00000515981 EYA1Q99502 592 aa13.13□□□□□ -0.31
SCARNA16-201ENST00000515981 ABCC6O95255 1503 aa13.13□□□□□ -0.31
SCARNA16-201ENST00000515981 RGS12O14924 1447 aa13.13□□□□□ -0.31
SCARNA16-201ENST00000515981 SMG6Q86US8 1419 aaKnown RBP13.13□□□□□ -0.31
SCARNA16-201ENST00000515981 IL13P35225 146 aa13.12□□□□□ -0.31
SCARNA16-201ENST00000515981 RALBP1Q15311 655 aa13.12□□□□□ -0.31
SCARNA16-201ENST00000515981 BARGINQ6ZT62 677 aa13.12□□□□□ -0.31
SCARNA16-201ENST00000515981 PRKRIP1Q9H875 184 aaPredicted RBP13.12□□□□□ -0.31
SCARNA16-201ENST00000515981 FAM182BQ5T319 152 aa13.11□□□□□ -0.31
SCARNA16-201ENST00000515981 THRAP3Q9Y2W1 955 aaKnown RBP13.11□□□□□ -0.31
SCARNA16-201ENST00000515981 DIAPH1O60610 1272 aaKnown RBP13.1□□□□□ -0.31
SCARNA16-201ENST00000515981 AEBP1Q8IUX7 1158 aa13.1□□□□□ -0.31
SCARNA16-201ENST00000515981 CDK12Q9NYV4 1490 aaPredicted RBP13.1□□□□□ -0.31
SCARNA16-201ENST00000515981 IL2RBP14784 551 aa13.08□□□□□ -0.32
SCARNA16-201ENST00000515981 U2SURPO15042 1029 aaKnown RBP13.07□□□□□ -0.32
SCARNA16-201ENST00000515981 HMOX1P09601 288 aa13.07□□□□□ -0.32
SCARNA16-201ENST00000515981 SULT6B1Q6IMI4 303 aa13.07□□□□□ -0.32
SCARNA16-201ENST00000515981 KRT27Q7Z3Y8 459 aa13.07□□□□□ -0.32
SCARNA16-201ENST00000515981 CFAP53Q96M91 514 aa13.07□□□□□ -0.32
SCARNA16-201ENST00000515981 MYBBP1AQ9BQG0 1328 aaKnown RBP13.07□□□□□ -0.32
SCARNA16-201ENST00000515981 BRWD3Q6RI45 1802 aa13.06□□□□□ -0.32
SCARNA16-201ENST00000515981 DISP2A7MBM2 1401 aa13.06□□□□□ -0.32
SCARNA16-201ENST00000515981 COL3A1P02461 1466 aaPredicted RBP13.06□□□□□ -0.32
SCARNA16-201ENST00000515981 EXOC5O00471 708 aa13.06□□□□□ -0.32
SCARNA16-201ENST00000515981 ANP32CO43423 234 aa13.06□□□□□ -0.32
SCARNA16-201ENST00000515981 PDE3BQ13370 1112 aa13.06□□□□□ -0.32
SCARNA16-201ENST00000515981 DDB1Q16531 1140 aa13.06□□□□□ -0.32
SCARNA16-201ENST00000515981 CCDC184Q52MB2 194 aa13.06□□□□□ -0.32
SCARNA16-201ENST00000515981 RAPGEF4Q8WZA2 1011 aa13.06□□□□□ -0.32
SCARNA16-201ENST00000515981 IGSF1Q8N6C5 1336 aa13.06□□□□□ -0.32
SCARNA16-201ENST00000515981 MEGF6O75095 1541 aa13.05□□□□□ -0.32
SCARNA16-201ENST00000515981 TATP17735 454 aaPredicted RBP13.05□□□□□ -0.32
SCARNA16-201ENST00000515981 MARCH10Q8NA82 808 aaPredicted RBP13.05□□□□□ -0.32
SCARNA16-201ENST00000515981 DDX54Q8TDD1 881 aaKnown RBP13.05□□□□□ -0.32
SCARNA16-201ENST00000515981 CDCA7Q9BWT1 371 aaPredicted RBP13.05□□□□□ -0.32
SCARNA16-201ENST00000515981 FAM208AQ9UK61 1670 aaKnown RBP13.05□□□□□ -0.32
SCARNA16-201ENST00000515981 THSD7AQ9UPZ6 1657 aa13.05□□□□□ -0.32
SCARNA16-201ENST00000515981 ZCRB1Q8TBF4 217 aaKnown RBP13.04□□□□□ -0.32
SCARNA16-201ENST00000515981 U2AF1L5P0DN76 240 aaPredicted RBP13.03□□□□□ -0.32
SCARNA16-201ENST00000515981 U2AF1Q01081 240 aaKnown RBP eCLIP13.03□□□□□ -0.32
SCARNA16-201ENST00000515981 NUDCQ9Y266 331 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms