RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 COLQQ9Y215 455 aaPredicted RBP13.69□□□□□ -0.22
SH3D19-209ENST00000514013 SPATA31A1Q5TZJ5 1347 aa13.68□□□□□ -0.22
SH3D19-209ENST00000514013 PRR36Q9H6K5 1346 aa13.68□□□□□ -0.22
SH3D19-209ENST00000514013 ALS2Q96Q42 1657 aa13.68□□□□□ -0.22
SH3D19-209ENST00000514013 CRYBG1Q9Y4K1 1723 aa13.67□□□□□ -0.22
SH3D19-209ENST00000514013 ANKARQ7Z5J8 1434 aa13.67□□□□□ -0.22
SH3D19-209ENST00000514013 RREB1Q92766 1687 aa13.67□□□□□ -0.22
SH3D19-209ENST00000514013 FAM196AQ6ZSG2 479 aa13.67□□□□□ -0.22
SH3D19-209ENST00000514013 PARD3Q8TEW0 1356 aa13.67□□□□□ -0.22
SH3D19-209ENST00000514013 NUP188Q5SRE5 1749 aa13.67□□□□□ -0.22
SH3D19-209ENST00000514013 ACIN1Q9UKV3 1341 aaKnown RBP13.66□□□□□ -0.22
SH3D19-209ENST00000514013 CFAP70Q5T0N1 1121 aa13.66□□□□□ -0.22
SH3D19-209ENST00000514013 SGIP1Q9BQI5 828 aa13.66□□□□□ -0.22
SH3D19-209ENST00000514013 C14orf93Q9H972 538 aaKnown RBP13.66□□□□□ -0.22
SH3D19-209ENST00000514013 PRDM11Q9NQV5 511 aa13.66□□□□□ -0.22
SH3D19-209ENST00000514013 PCDHB13Q9Y5F0 798 aa13.66□□□□□ -0.22
SH3D19-209ENST00000514013 CHRNA2Q15822 529 aa13.65□□□□□ -0.22
SH3D19-209ENST00000514013 TRIM35Q9UPQ4 493 aa13.65□□□□□ -0.22
SH3D19-209ENST00000514013 KIAA0232Q92628 1395 aa13.65□□□□□ -0.22
SH3D19-209ENST00000514013 CAMTA1Q9Y6Y1 1673 aa13.65□□□□□ -0.22
SH3D19-209ENST00000514013 HIRIP3Q9BW71 556 aaPredicted RBP13.64□□□□□ -0.23
SH3D19-209ENST00000514013 NINLQ9Y2I6 1382 aa13.63□□□□□ -0.23
SH3D19-209ENST00000514013 IER5LQ5T953 404 aa13.63□□□□□ -0.23
SH3D19-209ENST00000514013 STRN4Q9NRL3 753 aa13.63□□□□□ -0.23
SH3D19-209ENST00000514013 ZBTB47Q9UFB7 747 aaPredicted RBP13.63□□□□□ -0.23
SH3D19-209ENST00000514013 GPRASP1Q5JY77 1395 aa13.62□□□□□ -0.23
SH3D19-209ENST00000514013 UTRNP46939 3433 aa13.62□□□□□ -0.23
SH3D19-209ENST00000514013 KCNQ2O43526 872 aa13.62□□□□□ -0.23
SH3D19-209ENST00000514013 SPON1Q9HCB6 807 aa13.62□□□□□ -0.23
SH3D19-209ENST00000514013 USP35Q9P2H5 1018 aa13.62□□□□□ -0.23
SH3D19-209ENST00000514013 DHX57Q6P158 1386 aaKnown RBP13.61□□□□□ -0.23
SH3D19-209ENST00000514013 DLC1Q96QB1 1528 aa13.61□□□□□ -0.23
SH3D19-209ENST00000514013 PDGFDQ9GZP0 370 aaPredicted RBP13.61□□□□□ -0.23
SH3D19-209ENST00000514013 PPP1R1BQ9UD71 204 aaPredicted RBP13.61□□□□□ -0.23
SH3D19-209ENST00000514013 NUBP1P53384 320 aa13.6□□□□□ -0.23
SH3D19-209ENST00000514013 ZNF784Q8NCA9 323 aaPredicted RBP13.6□□□□□ -0.23
SH3D19-209ENST00000514013 ANO8Q9HCE9 1232 aaPredicted RBP13.6□□□□□ -0.23
SH3D19-209ENST00000514013 ADGRB1O14514 1584 aa13.59□□□□□ -0.23
SH3D19-209ENST00000514013 SSH2Q76I76 1423 aa13.59□□□□□ -0.23
SH3D19-209ENST00000514013 ZC3H6P61129 1189 aaKnown RBP13.59□□□□□ -0.23
SH3D19-209ENST00000514013 NBPF8Q3BBV2 869 aa13.59□□□□□ -0.23
SH3D19-209ENST00000514013 NBPF14Q5TI25 921 aa13.59□□□□□ -0.23
SH3D19-209ENST00000514013 POGKQ9P215 609 aa13.59□□□□□ -0.23
SH3D19-209ENST00000514013 MINK1Q8N4C8 1332 aaPredicted RBP13.59□□□□□ -0.23
SH3D19-209ENST00000514013 TULP4Q9NRJ4 1543 aa13.59□□□□□ -0.23
SH3D19-209ENST00000514013 PDE3BQ13370 1112 aa13.58□□□□□ -0.24
SH3D19-209ENST00000514013 NUTM2GQ5VZR2 741 aa13.58□□□□□ -0.24
SH3D19-209ENST00000514013 LARP1Q6PKG0 1096 aaKnown RBP13.58□□□□□ -0.24
SH3D19-209ENST00000514013 BARGINQ6ZT62 677 aa13.58□□□□□ -0.24
SH3D19-209ENST00000514013 PTF1AQ7RTS3 328 aa13.57□□□□□ -0.24
SH3D19-209ENST00000514013 NRKQ7Z2Y5 1582 aa13.57□□□□□ -0.24
SH3D19-209ENST00000514013 PHRF1Q9P1Y6 1649 aaKnown RBP13.57□□□□□ -0.24
SH3D19-209ENST00000514013 IFNL1Q8IU54 200 aa13.56□□□□□ -0.24
SH3D19-209ENST00000514013 NGDNQ8NEJ9 315 aaKnown RBP13.56□□□□□ -0.24
SH3D19-209ENST00000514013 MPHOSPH9Q99550 1183 aa13.56□□□□□ -0.24
SH3D19-209ENST00000514013 WASLO00401 505 aaPredicted RBP13.55□□□□□ -0.24
SH3D19-209ENST00000514013 TRAK1Q9UPV9 953 aa13.55□□□□□ -0.24
SH3D19-209ENST00000514013 CASZ1Q86V15 1759 aa13.55□□□□□ -0.24
SH3D19-209ENST00000514013 ATP7BP35670 1465 aa13.55□□□□□ -0.24
SH3D19-209ENST00000514013 SENP3-EIF4A1A0A087X0R7 540 aa13.54□□□□□ -0.24
SH3D19-209ENST00000514013 PTGER2P43116 358 aa13.54□□□□□ -0.24
SH3D19-209ENST00000514013 TCP11L2Q8N4U5 519 aa13.54□□□□□ -0.24
SH3D19-209ENST00000514013 FAM212AQ96EL1 285 aa13.54□□□□□ -0.24
SH3D19-209ENST00000514013 ZBTB7AO95365 584 aa13.53□□□□□ -0.24
SH3D19-209ENST00000514013 MYOM1P52179 1685 aa13.53□□□□□ -0.24
SH3D19-209ENST00000514013 LMO7Q8WWI1 1683 aa13.53□□□□□ -0.24
SH3D19-209ENST00000514013 TMEM106CQ9BVX2 250 aa13.52□□□□□ -0.25
SH3D19-209ENST00000514013 EIF3AQ14152 1382 aaKnown RBP13.52□□□□□ -0.25
SH3D19-209ENST00000514013 PEAK1Q9H792 1746 aa13.52□□□□□ -0.25
SH3D19-209ENST00000514013 EVA1CP58658 441 aa13.51□□□□□ -0.25
SH3D19-209ENST00000514013 C1QTNF8P60827 252 aa13.5□□□□□ -0.25
SH3D19-209ENST00000514013 SLAIN1Q8ND83 568 aa13.5□□□□□ -0.25
SH3D19-209ENST00000514013 NUDT16Q96DE0 195 aaKnown RBP13.5□□□□□ -0.25
SH3D19-209ENST00000514013 COL5A2P05997 1499 aaPredicted RBP13.49□□□□□ -0.25
SH3D19-209ENST00000514013 OVOS2A0A0G2JMS6 1433 aa13.49□□□□□ -0.25
SH3D19-209ENST00000514013 OVOS2A0A0J9YW53 1432 aa13.49□□□□□ -0.25
SH3D19-209ENST00000514013 OVOS2Q6IE36 1432 aa13.49□□□□□ -0.25
SH3D19-209ENST00000514013 CPDO75976 1380 aa13.49□□□□□ -0.25
SH3D19-209ENST00000514013 IFFO2Q5TF58 517 aa13.49□□□□□ -0.25
SH3D19-209ENST00000514013 PARP4Q9UKK3 1724 aaKnown RBP13.49□□□□□ -0.25
SH3D19-209ENST00000514013 USP19O94966 1318 aa13.48□□□□□ -0.25
SH3D19-209ENST00000514013 CEP350Q5VT06 3117 aa13.48□□□□□ -0.25
SH3D19-209ENST00000514013 PLSCR1O15162 318 aa13.48□□□□□ -0.25
SH3D19-209ENST00000514013 PLCG2P16885 1265 aa13.48□□□□□ -0.25
SH3D19-209ENST00000514013 SYT17Q9BSW7 474 aa13.48□□□□□ -0.25
SH3D19-209ENST00000514013 FHDC1Q9C0D6 1143 aaPredicted RBP13.48□□□□□ -0.25
SH3D19-209ENST00000514013 POLR3AO14802 1390 aaPredicted RBP13.47□□□□□ -0.25
SH3D19-209ENST00000514013 LRRC37A3O60309 1634 aa13.47□□□□□ -0.25
SH3D19-209ENST00000514013 CDAN1Q8IWY9 1227 aa13.47□□□□□ -0.25
SH3D19-209ENST00000514013 ACEP12821 1306 aa13.46□□□□□ -0.25
SH3D19-209ENST00000514013 RGPD3A6NKT7 1758 aaPredicted RBP13.46□□□□□ -0.25
SH3D19-209ENST00000514013 RGPD4Q7Z3J3 1758 aa13.46□□□□□ -0.25
SH3D19-209ENST00000514013 THRAP3Q9Y2W1 955 aaKnown RBP13.46□□□□□ -0.25
SH3D19-209ENST00000514013 BCL11BQ9C0K0 894 aaPredicted RBP13.45□□□□□ -0.26
SH3D19-209ENST00000514013 CRB1P82279 1406 aa13.45□□□□□ -0.26
SH3D19-209ENST00000514013 ABTB2Q8N961 1025 aa13.44□□□□□ -0.26
SH3D19-209ENST00000514013 MARCH10Q8NA82 808 aaPredicted RBP13.44□□□□□ -0.26
SH3D19-209ENST00000514013 TOPAZ1Q8N9V7 1692 aa13.44□□□□□ -0.26
SH3D19-209ENST00000514013 GCP02774 474 aa13.43□□□□□ -0.26
SH3D19-209ENST00000514013 CDK19Q9BWU1 502 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms