RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 PCDHGC3Q9UN70 934 aa8.62□□□□□ -1.03
CHD1-208ENST00000512392 PRPF38BQ5VTL8 546 aaKnown RBP8.61□□□□□ -1.03
CHD1-208ENST00000512392 LARGE2Q8N3Y3 721 aa8.61□□□□□ -1.03
CHD1-208ENST00000512392 PCDHB15Q9Y5E8 787 aa8.61□□□□□ -1.03
CHD1-208ENST00000512392 LMOD1P29536 600 aaPredicted RBP8.61□□□□□ -1.03
CHD1-208ENST00000512392 SETQ01105 290 aaPredicted RBP8.61□□□□□ -1.03
CHD1-208ENST00000512392 PALM3A6NDB9 673 aaPredicted RBP8.6□□□□□ -1.03
CHD1-208ENST00000512392 ZPR1O75312 459 aa8.6□□□□□ -1.03
CHD1-208ENST00000512392 PARNO95453 639 aaKnown RBP8.6□□□□□ -1.03
CHD1-208ENST00000512392 ZEB1P37275 1124 aaPredicted RBP8.6□□□□□ -1.03
CHD1-208ENST00000512392 WWC1Q8IX03 1113 aa8.6□□□□□ -1.03
CHD1-208ENST00000512392 EVI5LQ96CN4 794 aa8.6□□□□□ -1.03
CHD1-208ENST00000512392 LNPKQ9C0E8 428 aa8.6□□□□□ -1.03
CHD1-208ENST00000512392 ITGBL1O95965 494 aaPredicted RBP8.59□□□□□ -1.03
CHD1-208ENST00000512392 FOXD4L6Q3SYB3 417 aaPredicted RBP8.59□□□□□ -1.03
CHD1-208ENST00000512392 BRICD5Q6PL45 260 aa8.59□□□□□ -1.03
CHD1-208ENST00000512392 FOXD4L3Q6VB84 417 aaPredicted RBP8.59□□□□□ -1.03
CHD1-208ENST00000512392 APBB1IPQ7Z5R6 666 aaPredicted RBP8.59□□□□□ -1.03
CHD1-208ENST00000512392 NPAS4Q8IUM7 802 aa8.59□□□□□ -1.03
CHD1-208ENST00000512392 LILRB3O75022 631 aa8.59□□□□□ -1.03
CHD1-208ENST00000512392 ATG7O95352 703 aa8.59□□□□□ -1.03
CHD1-208ENST00000512392 FMNL1O95466 1100 aaPredicted RBP8.59□□□□□ -1.03
CHD1-208ENST00000512392 VAMP1P23763 118 aa8.59□□□□□ -1.03
CHD1-208ENST00000512392 THAP11Q96EK4 314 aa8.59□□□□□ -1.03
CHD1-208ENST00000512392 CCER1Q8TC90 406 aaPredicted RBP8.58□□□□□ -1.04
CHD1-208ENST00000512392 ZBTB3Q9H5J0 574 aa8.58□□□□□ -1.04
CHD1-208ENST00000512392 LAS1LQ9Y4W2 734 aaKnown RBP8.58□□□□□ -1.04
CHD1-208ENST00000512392 KCNC4Q03721 635 aa8.57□□□□□ -1.04
CHD1-208ENST00000512392 MTMR2Q13614 643 aa8.57□□□□□ -1.04
CHD1-208ENST00000512392 CSPP1Q1MSJ5 1256 aa8.57□□□□□ -1.04
CHD1-208ENST00000512392 SPTY2D1Q68D10 685 aaPredicted RBP8.57□□□□□ -1.04
CHD1-208ENST00000512392 ZNF516Q92618 1163 aa8.57□□□□□ -1.04
CHD1-208ENST00000512392 ANKRD33BA6NCL7 494 aa8.57□□□□□ -1.04
CHD1-208ENST00000512392 C6orf229H3BNL8 230 aa8.57□□□□□ -1.04
CHD1-208ENST00000512392 EGFLAMQ63HQ2 1017 aa8.57□□□□□ -1.04
CHD1-208ENST00000512392 PPP2R2DQ66LE6 453 aa8.57□□□□□ -1.04
CHD1-208ENST00000512392 NOP9Q86U38 636 aaKnown RBP8.57□□□□□ -1.04
CHD1-208ENST00000512392 TLDC2A0PJX2 215 aa8.56□□□□□ -1.04
CHD1-208ENST00000512392 QPCTQ16769 361 aa8.56□□□□□ -1.04
CHD1-208ENST00000512392 C9orf131Q5VYM1 1079 aa8.56□□□□□ -1.04
CHD1-208ENST00000512392 RNF19BQ6ZMZ0 732 aa8.56□□□□□ -1.04
CHD1-208ENST00000512392 SPACA7Q96KW9 195 aa8.56□□□□□ -1.04
CHD1-208ENST00000512392 NUTM2BA6NNL0 878 aaPredicted RBP8.55□□□□□ -1.04
CHD1-208ENST00000512392 NUTM2EB1AL46 878 aaPredicted RBP8.55□□□□□ -1.04
CHD1-208ENST00000512392 TMEM259Q4ZIN3 620 aa8.55□□□□□ -1.04
CHD1-208ENST00000512392 NUTM2DQ5VT03 806 aaPredicted RBP8.55□□□□□ -1.04
CHD1-208ENST00000512392 RETREG3Q86VR2 466 aa8.55□□□□□ -1.04
CHD1-208ENST00000512392 NUTM2AQ8IVF1 878 aaPredicted RBP8.55□□□□□ -1.04
CHD1-208ENST00000512392 CABLES1Q8TDN4 633 aa8.55□□□□□ -1.04
CHD1-208ENST00000512392 SPSB2Q99619 263 aa8.55□□□□□ -1.04
CHD1-208ENST00000512392 USB1Q9BQ65 265 aaKnown RBP8.55□□□□□ -1.04
CHD1-208ENST00000512392 TFIP11Q9UBB9 837 aaKnown RBP8.55□□□□□ -1.04
CHD1-208ENST00000512392 CNPY4Q8N129 248 aa8.55□□□□□ -1.04
CHD1-208ENST00000512392 SYMPKQ92797 1274 aaKnown RBP8.55□□□□□ -1.04
CHD1-208ENST00000512392 ADH1BP00325 375 aa8.54□□□□□ -1.04
CHD1-208ENST00000512392 ERCC5P28715 1186 aaPredicted RBP8.54□□□□□ -1.04
CHD1-208ENST00000512392 MARSP56192 900 aaKnown RBP8.54□□□□□ -1.04
CHD1-208ENST00000512392 TMTC2Q8N394 836 aa8.54□□□□□ -1.04
CHD1-208ENST00000512392 TMA7Q9Y2S6 64 aaKnown RBP8.54□□□□□ -1.04
CHD1-208ENST00000512392 MCCD1P59942 119 aaPredicted RBP8.53□□□□□ -1.04
CHD1-208ENST00000512392 PSME1Q06323 249 aa8.53□□□□□ -1.04
CHD1-208ENST00000512392 TSNAXIP1Q2TAA8 658 aa8.53□□□□□ -1.04
CHD1-208ENST00000512392 RTL5Q5HYW3 569 aaPredicted RBP8.53□□□□□ -1.04
CHD1-208ENST00000512392 TERF2IPQ9NYB0 399 aa8.53□□□□□ -1.04
CHD1-208ENST00000512392 MORC4Q8TE76 937 aa8.53□□□□□ -1.04
CHD1-208ENST00000512392 UCN2Q96RP3 112 aa8.53□□□□□ -1.04
CHD1-208ENST00000512392 TLL1O43897 1013 aa8.52□□□□□ -1.05
CHD1-208ENST00000512392 RALBP1Q15311 655 aa8.52□□□□□ -1.05
CHD1-208ENST00000512392 MSS51Q4VC12 460 aa8.52□□□□□ -1.05
CHD1-208ENST00000512392 IFFO2Q5TF58 517 aa8.52□□□□□ -1.05
CHD1-208ENST00000512392 FAM160A2Q8N612 972 aaPredicted RBP8.52□□□□□ -1.05
CHD1-208ENST00000512392 GPATCH11Q8N954 259 aa8.52□□□□□ -1.05
CHD1-208ENST00000512392 METTL14Q9HCE5 456 aaKnown RBP8.52□□□□□ -1.05
CHD1-208ENST00000512392 PTPROQ16827 1216 aa8.52□□□□□ -1.05
CHD1-208ENST00000512392 CCDC144BQ3MJ40 725 aa8.52□□□□□ -1.05
CHD1-208ENST00000512392 NLGN1Q8N2Q7 840 aa8.52□□□□□ -1.05
CHD1-208ENST00000512392 NKX2-3Q8TAU0 364 aa8.52□□□□□ -1.05
CHD1-208ENST00000512392 PRR7Q8TB68 274 aa8.52□□□□□ -1.05
CHD1-208ENST00000512392 DHX38Q92620 1227 aaKnown RBP8.52□□□□□ -1.05
CHD1-208ENST00000512392 SOWAHDA6NJG2 315 aa8.51□□□□□ -1.05
CHD1-208ENST00000512392 PMM1Q92871 262 aa8.51□□□□□ -1.05
CHD1-208ENST00000512392 IGBP1P78318 339 aa8.5□□□□□ -1.05
CHD1-208ENST00000512392 CCDC181Q5TID7 509 aa8.5□□□□□ -1.05
CHD1-208ENST00000512392 DESI1Q6ICB0 168 aa8.5□□□□□ -1.05
CHD1-208ENST00000512392 NME8Q8N427 588 aa8.5□□□□□ -1.05
CHD1-208ENST00000512392 TANGO6Q9C0B7 1094 aa8.5□□□□□ -1.05
CHD1-208ENST00000512392 PIF1Q9H611 641 aa8.5□□□□□ -1.05
CHD1-208ENST00000512392 hCG_2014768A0A024R1R8 64 aa8.5□□□□□ -1.05
CHD1-208ENST00000512392 CFAP99D6REC4 459 aa8.5□□□□□ -1.05
CHD1-208ENST00000512392 SDE2Q6IQ49 451 aa8.5□□□□□ -1.05
CHD1-208ENST00000512392 SLC6A16Q9GZN6 736 aa8.5□□□□□ -1.05
CHD1-208ENST00000512392 FAN1Q9Y2M0 1017 aa8.5□□□□□ -1.05
CHD1-208ENST00000512392 CCDC194A0A1B0GVG4 234 aa8.49□□□□□ -1.05
CHD1-208ENST00000512392 SERPINB4P48594 390 aa8.49□□□□□ -1.05
CHD1-208ENST00000512392 FBXO33Q7Z6M2 555 aa8.49□□□□□ -1.05
CHD1-208ENST00000512392 FAM9BQ8IZU0 186 aa8.49□□□□□ -1.05
CHD1-208ENST00000512392 PIK3R5Q8WYR1 880 aa8.49□□□□□ -1.05
CHD1-208ENST00000512392 KCNB2Q92953 911 aa8.49□□□□□ -1.05
CHD1-208ENST00000512392 BACH2Q9BYV9 841 aa8.49□□□□□ -1.05
CHD1-208ENST00000512392 TBX22Q9Y458 520 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms