RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 PDXDC2PQ6P474 469 aa8.7□□□□□ -1.02
UBE2D3-230ENST00000510599 SLC10A4Q96EP9 437 aa8.7□□□□□ -1.02
UBE2D3-230ENST00000510599 TTLL8A6PVC2 850 aa8.69□□□□□ -1.02
UBE2D3-230ENST00000510599 CTDSPL2Q05D32 466 aa8.69□□□□□ -1.02
UBE2D3-230ENST00000510599 FKBPLQ9UIM3 349 aa8.69□□□□□ -1.02
UBE2D3-230ENST00000510599 ZC3H4Q9UPT8 1303 aaKnown RBP8.69□□□□□ -1.02
UBE2D3-230ENST00000510599 PPP1R26Q5T8A7 1209 aaPredicted RBP8.68□□□□□ -1.02
UBE2D3-230ENST00000510599 DHX9Q08211 1270 aaKnown RBP8.67□□□□□ -1.02
UBE2D3-230ENST00000510599 ZBTB33Q86T24 672 aa8.67□□□□□ -1.02
UBE2D3-230ENST00000510599 Q6ZVU0 165 aa8.66□□□□□ -1.02
UBE2D3-230ENST00000510599 KCTD15Q96SI1 283 aaPredicted RBP8.66□□□□□ -1.02
UBE2D3-230ENST00000510599 PTSQ03393 145 aa8.65□□□□□ -1.02
UBE2D3-230ENST00000510599 SKIV2LQ15477 1246 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-230ENST00000510599 LRRN4Q8WUT4 740 aa8.65□□□□□ -1.02
UBE2D3-230ENST00000510599 SPINT1O43278 529 aa8.64□□□□□ -1.03
UBE2D3-230ENST00000510599 CBLBQ13191 982 aa8.64□□□□□ -1.03
UBE2D3-230ENST00000510599 ATP1B4Q9UN42 357 aaPredicted RBP8.64□□□□□ -1.03
UBE2D3-230ENST00000510599 PTK2Q05397 1052 aa8.63□□□□□ -1.03
UBE2D3-230ENST00000510599 SH3D19Q5HYK7 790 aa8.63□□□□□ -1.03
UBE2D3-230ENST00000510599 FIGNL2A6NMB9 653 aa8.62□□□□□ -1.03
UBE2D3-230ENST00000510599 NR6A1Q15406 480 aa8.62□□□□□ -1.03
UBE2D3-230ENST00000510599 NBPF20Q3BBV1 942 aa8.62□□□□□ -1.03
UBE2D3-230ENST00000510599 INTS6LQ5JSJ4 861 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-230ENST00000510599 PNMA1Q8ND90 353 aa8.62□□□□□ -1.03
UBE2D3-230ENST00000510599 DDRGK1Q96HY6 314 aa8.62□□□□□ -1.03
UBE2D3-230ENST00000510599 GPSM3Q9Y4H4 160 aa8.62□□□□□ -1.03
UBE2D3-230ENST00000510599 PPP2R2DQ66LE6 453 aa8.61□□□□□ -1.03
UBE2D3-230ENST00000510599 CCDC155Q8N6L0 562 aa8.61□□□□□ -1.03
UBE2D3-230ENST00000510599 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.61□□□□□ -1.03
UBE2D3-230ENST00000510599 NANOS1Q8WY41 292 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-230ENST00000510599 CNTNAP3BQ96NU0 1288 aa8.6□□□□□ -1.03
UBE2D3-230ENST00000510599 CNTNAP3Q9BZ76 1288 aa8.6□□□□□ -1.03
UBE2D3-230ENST00000510599 RNF225M0QZC1 329 aaPredicted RBP8.59□□□□□ -1.03
UBE2D3-230ENST00000510599 AP1G2O75843 785 aa8.59□□□□□ -1.03
UBE2D3-230ENST00000510599 RELBQ01201 579 aa8.59□□□□□ -1.03
UBE2D3-230ENST00000510599 KRT76Q01546 638 aa8.59□□□□□ -1.03
UBE2D3-230ENST00000510599 KCNMA1Q12791 1236 aa8.59□□□□□ -1.03
UBE2D3-230ENST00000510599 GPR161Q8N6U8 529 aaKnown RBP8.59□□□□□ -1.03
UBE2D3-230ENST00000510599 ADAM32Q8TC27 787 aa8.59□□□□□ -1.03
UBE2D3-230ENST00000510599 PROCA1Q8NCQ7 364 aaPredicted RBP8.58□□□□□ -1.04
UBE2D3-230ENST00000510599 COL25A1Q9BXS0 654 aaPredicted RBP8.58□□□□□ -1.04
UBE2D3-230ENST00000510599 KDM4CQ9H3R0 1056 aa8.58□□□□□ -1.04
UBE2D3-230ENST00000510599 SLC35F4A4IF30 521 aa8.57□□□□□ -1.04
UBE2D3-230ENST00000510599 ITGA6P23229 1130 aa8.57□□□□□ -1.04
UBE2D3-230ENST00000510599 CTSOP43234 321 aaPredicted RBP8.57□□□□□ -1.04
UBE2D3-230ENST00000510599 FBXO31Q5XUX0 539 aaPredicted RBP8.57□□□□□ -1.04
UBE2D3-230ENST00000510599 AGBL1Q96MI9 1066 aa8.57□□□□□ -1.04
UBE2D3-230ENST00000510599 OCSTAMPQ9BR26 566 aa8.57□□□□□ -1.04
UBE2D3-230ENST00000510599 POLMQ9NP87 494 aaPredicted RBP8.57□□□□□ -1.04
UBE2D3-230ENST00000510599 INSM2Q96T92 566 aaPredicted RBP8.56□□□□□ -1.04
UBE2D3-230ENST00000510599 GPBP1L1Q9HC44 474 aaPredicted RBP8.56□□□□□ -1.04
UBE2D3-230ENST00000510599 CDC14CA4D256 554 aa8.55□□□□□ -1.04
UBE2D3-230ENST00000510599 DZIP3Q86Y13 1208 aaKnown RBP8.55□□□□□ -1.04
UBE2D3-230ENST00000510599 ZNF784Q8NCA9 323 aaPredicted RBP8.55□□□□□ -1.04
UBE2D3-230ENST00000510599 RNF217Q8TC41 542 aa8.55□□□□□ -1.04
UBE2D3-230ENST00000510599 FAM117AQ9C073 453 aa8.55□□□□□ -1.04
UBE2D3-230ENST00000510599 ADH1AP07327 375 aa8.54□□□□□ -1.04
UBE2D3-230ENST00000510599 USP17L8P0C7I0 530 aa8.54□□□□□ -1.04
UBE2D3-230ENST00000510599 RAB15P59190 212 aa8.54□□□□□ -1.04
UBE2D3-230ENST00000510599 SV2AQ7L0J3 742 aa8.54□□□□□ -1.04
UBE2D3-230ENST00000510599 TRIM52Q96A61 297 aa8.54□□□□□ -1.04
UBE2D3-230ENST00000510599 TMPRSS4Q9NRS4 437 aa8.54□□□□□ -1.04
UBE2D3-230ENST00000510599 SVOPQ8N4V2 548 aa8.53□□□□□ -1.04
UBE2D3-230ENST00000510599 ZNF395Q9H8N7 513 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-230ENST00000510599 ADAMTS8Q9UP79 889 aa8.53□□□□□ -1.04
UBE2D3-230ENST00000510599 RNFT1Q5M7Z0 435 aa8.52□□□□□ -1.05
UBE2D3-230ENST00000510599 VWA5B2Q8N398 1253 aa8.52□□□□□ -1.05
UBE2D3-230ENST00000510599 EPS8L1Q8TE68 723 aa8.52□□□□□ -1.05
UBE2D3-230ENST00000510599 HMX1Q9NP08 348 aaPredicted RBP8.52□□□□□ -1.05
UBE2D3-230ENST00000510599 ERVH48-1M5A8F1 160 aa8.51□□□□□ -1.05
UBE2D3-230ENST00000510599 ZNF385CQ66K41 422 aaPredicted RBP8.51□□□□□ -1.05
UBE2D3-230ENST00000510599 TMEM151AQ8N4L1 468 aa8.51□□□□□ -1.05
UBE2D3-230ENST00000510599 ESPNB1AK53 854 aa8.5□□□□□ -1.05
UBE2D3-230ENST00000510599 SLURP2P0DP57 97 aa8.5□□□□□ -1.05
UBE2D3-230ENST00000510599 GSK3AP49840 483 aa8.5□□□□□ -1.05
UBE2D3-230ENST00000510599 FOXD4L5Q5VV16 416 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-230ENST00000510599 SEPT12Q8IYM1 358 aa8.5□□□□□ -1.05
UBE2D3-230ENST00000510599 KCTD17Q8N5Z5 321 aa8.5□□□□□ -1.05
UBE2D3-230ENST00000510599 LILRA1O75019 489 aa8.49□□□□□ -1.05
UBE2D3-230ENST00000510599 GDF11O95390 407 aa8.49□□□□□ -1.05
UBE2D3-230ENST00000510599 RFC5P40937 340 aa8.49□□□□□ -1.05
UBE2D3-230ENST00000510599 PTGIRP43119 386 aa8.49□□□□□ -1.05
UBE2D3-230ENST00000510599 RASSF7Q02833 373 aa8.49□□□□□ -1.05
UBE2D3-230ENST00000510599 SENP3-EIF4A1A0A087X0R7 540 aa8.48□□□□□ -1.05
UBE2D3-230ENST00000510599 LYSMD3Q7Z3D4 306 aa8.48□□□□□ -1.05
UBE2D3-230ENST00000510599 ADD1P35611 737 aaKnown RBP8.47□□□□□ -1.05
UBE2D3-230ENST00000510599 CYLDQ9NQC7 956 aa8.46□□□□□ -1.06
UBE2D3-230ENST00000510599 KDF1Q8NAX2 398 aaPredicted RBP8.45□□□□□ -1.06
UBE2D3-230ENST00000510599 WHAMMQ8TF30 809 aa8.45□□□□□ -1.06
UBE2D3-230ENST00000510599 ARHGEF15O94989 841 aa8.44□□□□□ -1.06
UBE2D3-230ENST00000510599 ADAMTS2O95450 1211 aa8.44□□□□□ -1.06
UBE2D3-230ENST00000510599 RNF144AP50876 292 aaPredicted RBP8.44□□□□□ -1.06
UBE2D3-230ENST00000510599 MARSP56192 900 aaKnown RBP8.44□□□□□ -1.06
UBE2D3-230ENST00000510599 SRSF11Q05519 484 aaKnown RBP8.44□□□□□ -1.06
UBE2D3-230ENST00000510599 PCMTD1Q96MG8 357 aaPredicted RBP8.44□□□□□ -1.06
UBE2D3-230ENST00000510599 ZBBXA8MT70 800 aa8.43□□□□□ -1.06
UBE2D3-230ENST00000510599 ATP5J2-PTCD1G3V325 749 aa8.43□□□□□ -1.06
UBE2D3-230ENST00000510599 MAP3K10Q02779 954 aa8.43□□□□□ -1.06
UBE2D3-230ENST00000510599 TMEM259Q4ZIN3 620 aa8.43□□□□□ -1.06
UBE2D3-230ENST00000510599 CCDC125Q86Z20 511 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms