RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 IRS1P35568 1242 aa6.17□□□□□ -1.42
HMGB1P35-201ENST00000503360 MARSP56192 900 aaKnown RBP6.17□□□□□ -1.42
HMGB1P35-201ENST00000503360 RNFT1Q5M7Z0 435 aa6.17□□□□□ -1.42
HMGB1P35-201ENST00000503360 SV2AQ7L0J3 742 aa6.17□□□□□ -1.42
HMGB1P35-201ENST00000503360 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.17□□□□□ -1.42
HMGB1P35-201ENST00000503360 RIC3Q7Z5B4 369 aa6.17□□□□□ -1.42
HMGB1P35-201ENST00000503360 KDM2AQ9Y2K7 1162 aa6.17□□□□□ -1.42
HMGB1P35-201ENST00000503360 ZMYND10O75800 440 aa6.16□□□□□ -1.42
HMGB1P35-201ENST00000503360 DHX9Q08211 1270 aaKnown RBP6.16□□□□□ -1.42
HMGB1P35-201ENST00000503360 GPAT2Q6NUI2 795 aa6.16□□□□□ -1.42
HMGB1P35-201ENST00000503360 PER1O15534 1290 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P35-201ENST00000503360 SRSF11Q05519 484 aaKnown RBP6.15□□□□□ -1.42
HMGB1P35-201ENST00000503360 PPP1R26Q5T8A7 1209 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P35-201ENST00000503360 ERFEQ4G0M1 354 aa6.14□□□□□ -1.43
HMGB1P35-201ENST00000503360 HELBQ8NG08 1087 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P35-201ENST00000503360 WHAMMQ8TF30 809 aa6.14□□□□□ -1.43
HMGB1P35-201ENST00000503360 GMCL1Q96IK5 515 aa6.14□□□□□ -1.43
HMGB1P35-201ENST00000503360 ENAMQ9NRM1 1142 aa6.14□□□□□ -1.43
HMGB1P35-201ENST00000503360 LILRB3O75022 631 aa6.13□□□□□ -1.43
HMGB1P35-201ENST00000503360 PDXDC2PQ6P474 469 aa6.13□□□□□ -1.43
HMGB1P35-201ENST00000503360 VWA5B2Q8N398 1253 aa6.13□□□□□ -1.43
HMGB1P35-201ENST00000503360 LRRC4BQ9NT99 713 aa6.13□□□□□ -1.43
HMGB1P35-201ENST00000503360 ZC3H4Q9UPT8 1303 aaKnown RBP6.13□□□□□ -1.43
HMGB1P35-201ENST00000503360 FIGNL2A6NMB9 653 aa6.12□□□□□ -1.43
HMGB1P35-201ENST00000503360 VSIG10Q8N0Z9 540 aa6.12□□□□□ -1.43
HMGB1P35-201ENST00000503360 SENP3-EIF4A1A0A087X0R7 540 aa6.11□□□□□ -1.43
HMGB1P35-201ENST00000503360 PHF20L1A8MW92 1017 aa6.11□□□□□ -1.43
HMGB1P35-201ENST00000503360 ADAM23O75077 832 aa6.11□□□□□ -1.43
HMGB1P35-201ENST00000503360 ADAMTS2O95450 1211 aa6.11□□□□□ -1.43
HMGB1P35-201ENST00000503360 MAP3K10Q02779 954 aa6.11□□□□□ -1.43
HMGB1P35-201ENST00000503360 PARP9Q8IXQ6 854 aa6.11□□□□□ -1.43
HMGB1P35-201ENST00000503360 CABLES1Q8TDN4 633 aa6.11□□□□□ -1.43
HMGB1P35-201ENST00000503360 MAGEB6P1A0A0J9YX57 407 aa6.1□□□□□ -1.43
HMGB1P35-201ENST00000503360 MSTNO14793 375 aa6.1□□□□□ -1.43
HMGB1P35-201ENST00000503360 RNF217Q8TC41 542 aa6.1□□□□□ -1.43
HMGB1P35-201ENST00000503360 TRIM52Q96A61 297 aa6.1□□□□□ -1.43
HMGB1P35-201ENST00000503360 KCTD15Q96SI1 283 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P35-201ENST00000503360 GPSM3Q9Y4H4 160 aa6.1□□□□□ -1.43
HMGB1P35-201ENST00000503360 CELA2BP08218 269 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P35-201ENST00000503360 CBLBQ13191 982 aa6.09□□□□□ -1.43
HMGB1P35-201ENST00000503360 XP32Q5T750 250 aa6.09□□□□□ -1.43
HMGB1P35-201ENST00000503360 LYPD4Q6UWN0 246 aa6.09□□□□□ -1.43
HMGB1P35-201ENST00000503360 SLC10A4Q96EP9 437 aa6.09□□□□□ -1.43
HMGB1P35-201ENST00000503360 CDC14CA4D256 554 aa6.08□□□□□ -1.44
HMGB1P35-201ENST00000503360 NUTM2BA6NNL0 878 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P35-201ENST00000503360 NUTM2EB1AL46 878 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P35-201ENST00000503360 CTSOP43234 321 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P35-201ENST00000503360 HAP1P54257 671 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P35-201ENST00000503360 NUTM2DQ5VT03 806 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P35-201ENST00000503360 MYSM1Q5VVJ2 828 aa6.08□□□□□ -1.44
HMGB1P35-201ENST00000503360 NUTM2AQ8IVF1 878 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P35-201ENST00000503360 BEND7Q8N7W2 519 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P35-201ENST00000503360 QPCTQ16769 361 aa6.07□□□□□ -1.44
HMGB1P35-201ENST00000503360 PLA2G4EQ3MJ16 856 aa6.07□□□□□ -1.44
HMGB1P35-201ENST00000503360 ALYREFQ86V81 257 aaKnown RBP6.07□□□□□ -1.44
HMGB1P35-201ENST00000503360 DCAF5Q96JK2 942 aa6.07□□□□□ -1.44
HMGB1P35-201ENST00000503360 ARHGAP9Q9BRR9 750 aa6.07□□□□□ -1.44
HMGB1P35-201ENST00000503360 LIMD1Q9UGP4 676 aa6.07□□□□□ -1.44
HMGB1P35-201ENST00000503360 TRIM66O15016 1216 aa6.06□□□□□ -1.44
HMGB1P35-201ENST00000503360 GAS6Q14393 721 aa6.06□□□□□ -1.44
HMGB1P35-201ENST00000503360 INSM2Q96T92 566 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P35-201ENST00000503360 SPOCK3Q9BQ16 436 aa6.06□□□□□ -1.44
HMGB1P35-201ENST00000503360 CARD14Q9BXL6 1004 aa6.06□□□□□ -1.44
HMGB1P35-201ENST00000503360 MBIPQ9NS73 344 aa6.06□□□□□ -1.44
HMGB1P35-201ENST00000503360 FKBPLQ9UIM3 349 aa6.06□□□□□ -1.44
HMGB1P35-201ENST00000503360 PROCP04070 461 aa6.05□□□□□ -1.44
HMGB1P35-201ENST00000503360 ADH1AP07327 375 aa6.05□□□□□ -1.44
HMGB1P35-201ENST00000503360 NBPF20Q3BBV1 942 aa6.05□□□□□ -1.44
HMGB1P35-201ENST00000503360 INTS6LQ5JSJ4 861 aaKnown RBP6.05□□□□□ -1.44
HMGB1P35-201ENST00000503360 PODNQ7Z5L7 613 aa6.05□□□□□ -1.44
HMGB1P35-201ENST00000503360 ZC3H15Q8WU90 426 aaKnown RBP6.05□□□□□ -1.44
HMGB1P35-201ENST00000503360 TSC1Q92574 1164 aa6.05□□□□□ -1.44
HMGB1P35-201ENST00000503360 AK7Q96M32 723 aa6.05□□□□□ -1.44
HMGB1P35-201ENST00000503360 BCRP11274 1271 aa6.04□□□□□ -1.44
HMGB1P35-201ENST00000503360 FOXR1Q6PIV2 292 aa6.04□□□□□ -1.44
HMGB1P35-201ENST00000503360 TRIM22Q8IYM9 498 aa6.04□□□□□ -1.44
HMGB1P35-201ENST00000503360 RSPH6AQ9H0K4 717 aa6.04□□□□□ -1.44
HMGB1P35-201ENST00000503360 POLMQ9NP87 494 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P35-201ENST00000503360 GPC1P35052 558 aa6.03□□□□□ -1.44
HMGB1P35-201ENST00000503360 PTGIRP43119 386 aa6.03□□□□□ -1.44
HMGB1P35-201ENST00000503360 RNF144AP50876 292 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P35-201ENST00000503360 RELBQ01201 579 aa6.03□□□□□ -1.44
HMGB1P35-201ENST00000503360 PTK2Q05397 1052 aa6.03□□□□□ -1.44
HMGB1P35-201ENST00000503360 CSPP1Q1MSJ5 1256 aa6.03□□□□□ -1.44
HMGB1P35-201ENST00000503360 RTL5Q5HYW3 569 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P35-201ENST00000503360 FOXD4L5Q5VV16 416 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P35-201ENST00000503360 LYSMD3Q7Z3D4 306 aa6.03□□□□□ -1.44
HMGB1P35-201ENST00000503360 ZBTB33Q86T24 672 aa6.03□□□□□ -1.44
HMGB1P35-201ENST00000503360 AGBL1Q96MI9 1066 aa6.03□□□□□ -1.44
HMGB1P35-201ENST00000503360 ITGB2P05107 769 aa6.02□□□□□ -1.45
HMGB1P35-201ENST00000503360 CLK2P49760 499 aaKnown RBP6.02□□□□□ -1.45
HMGB1P35-201ENST00000503360 PPP2R2DQ66LE6 453 aa6.02□□□□□ -1.45
HMGB1P35-201ENST00000503360 CCDC125Q86Z20 511 aa6.02□□□□□ -1.45
HMGB1P35-201ENST00000503360 SEPT12Q8IYM1 358 aa6.02□□□□□ -1.45
HMGB1P35-201ENST00000503360 KDF1Q8NAX2 398 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P35-201ENST00000503360 H7C1W4 665 aa6.01□□□□□ -1.45
HMGB1P35-201ENST00000503360 LILRA1O75019 489 aa6.01□□□□□ -1.45
HMGB1P35-201ENST00000503360 ZNF837Q96EG3 531 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P35-201ENST00000503360 CUEDC1Q9NWM3 386 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P35-201ENST00000503360 NSFL1CQ9UNZ2 370 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms