RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 CRB1P82279 1406 aa12.23□□□□□ -0.45
RNF4-203ENST00000503123 NME9Q86XW9 330 aa12.23□□□□□ -0.45
RNF4-203ENST00000503123 SEPT12Q8IYM1 358 aa12.23□□□□□ -0.45
RNF4-203ENST00000503123 KAT6BQ8WYB5 2073 aa12.22□□□□□ -0.45
RNF4-203ENST00000503123 EVA1CP58658 441 aa12.22□□□□□ -0.45
RNF4-203ENST00000503123 BARGINQ6ZT62 677 aa12.22□□□□□ -0.45
RNF4-203ENST00000503123 THRAP3Q9Y2W1 955 aaKnown RBP12.22□□□□□ -0.45
RNF4-203ENST00000503123 RGPD2P0DJD1 1756 aa12.22□□□□□ -0.45
RNF4-203ENST00000503123 LRRC37A3O60309 1634 aa12.22□□□□□ -0.45
RNF4-203ENST00000503123 TNS1Q9HBL0 1735 aaKnown RBP12.21□□□□□ -0.45
RNF4-203ENST00000503123 HSPA5P11021 654 aaKnown RBP12.21□□□□□ -0.45
RNF4-203ENST00000503123 FAM98CQ17RN3 349 aaKnown RBP12.21□□□□□ -0.45
RNF4-203ENST00000503123 CCDC125Q86Z20 511 aa12.21□□□□□ -0.45
RNF4-203ENST00000503123 STRN4Q9NRL3 753 aa12.21□□□□□ -0.45
RNF4-203ENST00000503123 WDR17Q8IZU2 1322 aa12.2□□□□□ -0.46
RNF4-203ENST00000503123 LARP1Q6PKG0 1096 aaKnown RBP12.2□□□□□ -0.46
RNF4-203ENST00000503123 KRT27Q7Z3Y8 459 aa12.2□□□□□ -0.46
RNF4-203ENST00000503123 ZRANB1Q9UGI0 708 aa12.2□□□□□ -0.46
RNF4-203ENST00000503123 BLMP54132 1417 aaPredicted RBP12.2□□□□□ -0.46
RNF4-203ENST00000503123 TCP11L2Q8N4U5 519 aa12.19□□□□□ -0.46
RNF4-203ENST00000503123 COG3Q96JB2 828 aa12.19□□□□□ -0.46
RNF4-203ENST00000503123 PEAK1Q9H792 1746 aa12.19□□□□□ -0.46
RNF4-203ENST00000503123 FYB1O15117 783 aa12.18□□□□□ -0.46
RNF4-203ENST00000503123 AXIN2Q9Y2T1 843 aa12.18□□□□□ -0.46
RNF4-203ENST00000503123 NSD3Q9BZ95 1437 aa12.18□□□□□ -0.46
RNF4-203ENST00000503123 SOX12O15370 315 aa12.17□□□□□ -0.46
RNF4-203ENST00000503123 RTL1A6NKG5 1358 aa12.17□□□□□ -0.46
RNF4-203ENST00000503123 CCDC7Q96M83 1385 aa12.17□□□□□ -0.46
RNF4-203ENST00000503123 RGPD3A6NKT7 1758 aaPredicted RBP12.16□□□□□ -0.46
RNF4-203ENST00000503123 RGPD4Q7Z3J3 1758 aa12.16□□□□□ -0.46
RNF4-203ENST00000503123 A0A0G2JS52 829 aa12.16□□□□□ -0.46
RNF4-203ENST00000503123 ZBTB7CA1YPR0 619 aa12.16□□□□□ -0.46
RNF4-203ENST00000503123 MYT1Q01538 1121 aa12.16□□□□□ -0.46
RNF4-203ENST00000503123 CDCA7Q9BWT1 371 aaPredicted RBP12.16□□□□□ -0.46
RNF4-203ENST00000503123 CARD14Q9BXL6 1004 aa12.16□□□□□ -0.46
RNF4-203ENST00000503123 KIF24Q5T7B8 1368 aa12.16□□□□□ -0.46
RNF4-203ENST00000503123 ERBB3P21860 1342 aa12.15□□□□□ -0.46
RNF4-203ENST00000503123 TOM1L2Q6ZVM7 507 aa12.15□□□□□ -0.46
RNF4-203ENST00000503123 CARD10Q9BWT7 1032 aa12.15□□□□□ -0.46
RNF4-203ENST00000503123 USP35Q9P2H5 1018 aa12.15□□□□□ -0.46
RNF4-203ENST00000503123 CGNL1Q0VF96 1302 aa12.14□□□□□ -0.47
RNF4-203ENST00000503123 DISP2A7MBM2 1401 aa12.14□□□□□ -0.47
RNF4-203ENST00000503123 C11orf95C9JLR9 678 aaPredicted RBP12.14□□□□□ -0.47
RNF4-203ENST00000503123 IP6K1Q92551 441 aa12.14□□□□□ -0.47
RNF4-203ENST00000503123 GGNBP2Q9H3C7 697 aa12.13□□□□□ -0.47
RNF4-203ENST00000503123 SHANK3Q9BYB0 1731 aa12.13□□□□□ -0.47
RNF4-203ENST00000503123 NSD2O96028 1365 aa12.13□□□□□ -0.47
RNF4-203ENST00000503123 MAP3K19Q56UN5 1328 aa12.12□□□□□ -0.47
RNF4-203ENST00000503123 CSB-PGBD3P0DP91 1061 aa12.12□□□□□ -0.47
RNF4-203ENST00000503123 FAM196AQ6ZSG2 479 aa12.12□□□□□ -0.47
RNF4-203ENST00000503123 RREB1Q92766 1687 aa12.12□□□□□ -0.47
RNF4-203ENST00000503123 BCL9O00512 1426 aa12.11□□□□□ -0.47
RNF4-203ENST00000503123 PDE3BQ13370 1112 aa12.11□□□□□ -0.47
RNF4-203ENST00000503123 ANKRD24Q8TF21 1146 aa12.11□□□□□ -0.47
RNF4-203ENST00000503123 OVOS2A0A0G2JMS6 1433 aa12.11□□□□□ -0.47
RNF4-203ENST00000503123 TNS2Q63HR2 1409 aa12.11□□□□□ -0.47
RNF4-203ENST00000503123 KIF7Q2M1P5 1343 aa12.11□□□□□ -0.47
RNF4-203ENST00000503123 FLT4P35916 1363 aa12.1□□□□□ -0.47
RNF4-203ENST00000503123 HOXC9P31274 260 aa12.1□□□□□ -0.47
RNF4-203ENST00000503123 AMPHP49418 695 aa12.1□□□□□ -0.47
RNF4-203ENST00000503123 SF3B2Q13435 895 aaKnown RBP12.1□□□□□ -0.47
RNF4-203ENST00000503123 POLR3GLQ9BT43 218 aa12.1□□□□□ -0.47
RNF4-203ENST00000503123 NHSQ6T4R5 1651 aa12.1□□□□□ -0.47
RNF4-203ENST00000503123 INSRP06213 1382 aa12.09□□□□□ -0.47
RNF4-203ENST00000503123 DDB1Q16531 1140 aa12.09□□□□□ -0.47
RNF4-203ENST00000503123 PANK3Q9H999 370 aa12.09□□□□□ -0.47
RNF4-203ENST00000503123 SMG6Q86US8 1419 aaKnown RBP12.09□□□□□ -0.47
RNF4-203ENST00000503123 PKD1L3Q7Z443 1732 aa12.08□□□□□ -0.47
RNF4-203ENST00000503123 NLRP2Q9NX02 1062 aa12.08□□□□□ -0.48
RNF4-203ENST00000503123 NUP188Q5SRE5 1749 aa12.08□□□□□ -0.48
RNF4-203ENST00000503123 BTAF1O14981 1849 aa12.07□□□□□ -0.48
RNF4-203ENST00000503123 FBLN1P23142 703 aa12.07□□□□□ -0.48
RNF4-203ENST00000503123 RRS1Q15050 365 aaKnown RBP12.07□□□□□ -0.48
RNF4-203ENST00000503123 FAM182BQ5T319 152 aa12.07□□□□□ -0.48
RNF4-203ENST00000503123 PARD3Q8TEW0 1356 aa12.06□□□□□ -0.48
RNF4-203ENST00000503123 IL2RBP14784 551 aa12.06□□□□□ -0.48
RNF4-203ENST00000503123 BAG6P46379 1132 aa12.06□□□□□ -0.48
RNF4-203ENST00000503123 NCAPD2Q15021 1401 aa12.05□□□□□ -0.48
RNF4-203ENST00000503123 EXOC5O00471 708 aa12.05□□□□□ -0.48
RNF4-203ENST00000503123 KNSTRNQ9Y448 316 aa12.05□□□□□ -0.48
RNF4-203ENST00000503123 DOT1LQ8TEK3 1739 aa12.05□□□□□ -0.48
RNF4-203ENST00000503123 ITGB4P16144 1822 aa12.04□□□□□ -0.48
RNF4-203ENST00000503123 VIRMAQ69YN4 1812 aaKnown RBP12.04□□□□□ -0.48
RNF4-203ENST00000503123 MARCH10Q8NA82 808 aaPredicted RBP12.04□□□□□ -0.48
RNF4-203ENST00000503123 WASHC2AQ641Q2 1341 aa12.04□□□□□ -0.48
RNF4-203ENST00000503123 TRIM37O94972 964 aa12.03□□□□□ -0.48
RNF4-203ENST00000503123 HSP90AB2PQ58FF8 381 aa12.03□□□□□ -0.48
RNF4-203ENST00000503123 DEFB132Q7Z7B7 95 aa12.03□□□□□ -0.48
RNF4-203ENST00000503123 LTV1Q96GA3 475 aaPredicted RBP12.03□□□□□ -0.48
RNF4-203ENST00000503123 EMILIN1Q9Y6C2 1016 aa12.03□□□□□ -0.48
RNF4-203ENST00000503123 NPC1L1Q9UHC9 1359 aa12.03□□□□□ -0.48
RNF4-203ENST00000503123 MEGF6O75095 1541 aa12.02□□□□□ -0.48
RNF4-203ENST00000503123 PER1O15534 1290 aaPredicted RBP12.02□□□□□ -0.49
RNF4-203ENST00000503123 AMER1Q5JTC6 1135 aaPredicted RBP12.02□□□□□ -0.49
RNF4-203ENST00000503123 POLKQ9UBT6 870 aa12.02□□□□□ -0.49
RNF4-203ENST00000503123 PLEKHG2Q9H7P9 1386 aa12.02□□□□□ -0.49
RNF4-203ENST00000503123 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
RNF4-203ENST00000503123 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
RNF4-203ENST00000503123 LY75O60449 1722 aa12□□□□□ -0.49
RNF4-203ENST00000503123 MORC1Q86VD1 984 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms