RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 LTV1Q96GA3 475 aaPredicted RBP15.23■□□□□ 0.03
APTX-230ENST00000494649 USP54Q70EL1 1684 aa15.22■□□□□ 0.03
APTX-230ENST00000494649 LTN1O94822 1766 aa15.22■□□□□ 0.03
APTX-230ENST00000494649 AMER1Q5JTC6 1135 aaPredicted RBP15.22■□□□□ 0.03
APTX-230ENST00000494649 EMILIN1Q9Y6C2 1016 aa15.22■□□□□ 0.03
APTX-230ENST00000494649 AMPHP49418 695 aa15.21■□□□□ 0.03
APTX-230ENST00000494649 NRAPQ86VF7 1730 aa15.21■□□□□ 0.03
APTX-230ENST00000494649 RGPD5Q99666 1765 aa15.21■□□□□ 0.03
APTX-230ENST00000494649 A0A0G2JS52 829 aa15.21■□□□□ 0.03
APTX-230ENST00000494649 CSB-PGBD3P0DP91 1061 aa15.21■□□□□ 0.03
APTX-230ENST00000494649 MYT1Q01538 1121 aa15.21■□□□□ 0.03
APTX-230ENST00000494649 MORC1Q86VD1 984 aa15.21■□□□□ 0.03
APTX-230ENST00000494649 GJD4Q96KN9 370 aaPredicted RBP15.21■□□□□ 0.03
APTX-230ENST00000494649 AATKQ6ZMQ8 1374 aa15.21■□□□□ 0.02
APTX-230ENST00000494649 ATRNO75882 1429 aa15.21■□□□□ 0.02
APTX-230ENST00000494649 LMO7Q8WWI1 1683 aa15.21■□□□□ 0.02
APTX-230ENST00000494649 NWD2Q9ULI1 1742 aa15.2■□□□□ 0.02
APTX-230ENST00000494649 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
APTX-230ENST00000494649 RBM6P78332 1123 aaKnown RBP15.19■□□□□ 0.02
APTX-230ENST00000494649 VPS72Q15906 364 aa15.19■□□□□ 0.02
APTX-230ENST00000494649 FAM98CQ17RN3 349 aaKnown RBP15.19■□□□□ 0.02
APTX-230ENST00000494649 COL18A1P39060 1754 aa15.19■□□□□ 0.02
APTX-230ENST00000494649 TOM1L2Q6ZVM7 507 aa15.18■□□□□ 0.02
APTX-230ENST00000494649 HOXC9P31274 260 aa15.18■□□□□ 0.02
APTX-230ENST00000494649 GLI3P10071 1580 aa15.18■□□□□ 0.02
APTX-230ENST00000494649 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.17■□□□□ 0.02
APTX-230ENST00000494649 ZNF316A6NFI3 1004 aaPredicted RBP15.17■□□□□ 0.02
APTX-230ENST00000494649 HSP90AB2PQ58FF8 381 aa15.17■□□□□ 0.02
APTX-230ENST00000494649 ANKRD24Q8TF21 1146 aa15.17■□□□□ 0.02
APTX-230ENST00000494649 SPATA31A5Q5VU36 1347 aa15.16■□□□□ 0.02
APTX-230ENST00000494649 SPATA31A7Q8IWB4 1347 aa15.16■□□□□ 0.02
APTX-230ENST00000494649 ANKRD26Q9UPS8 1709 aa15.16■□□□□ 0.02
APTX-230ENST00000494649 IP6K1Q92551 441 aa15.16■□□□□ 0.02
APTX-230ENST00000494649 POLKQ9UBT6 870 aa15.16■□□□□ 0.02
APTX-230ENST00000494649 RGS12O14924 1447 aa15.16■□□□□ 0.02
APTX-230ENST00000494649 NSD2O96028 1365 aa15.16■□□□□ 0.02
APTX-230ENST00000494649 PEAK1Q9H792 1746 aa15.16■□□□□ 0.02
APTX-230ENST00000494649 ERBB3P21860 1342 aa15.15■□□□□ 0.02
APTX-230ENST00000494649 NLRP2Q9NX02 1062 aa15.15■□□□□ 0.02
APTX-230ENST00000494649 SPATA31A1Q5TZJ5 1347 aa15.15■□□□□ 0.02
APTX-230ENST00000494649 WDR17Q8IZU2 1322 aa15.14■□□□□ 0.01
APTX-230ENST00000494649 MAP2P11137 1827 aaKnown RBP15.14■□□□□ 0.01
APTX-230ENST00000494649 EP400Q96L91 3159 aa15.13■□□□□ 0.01
APTX-230ENST00000494649 CRB1P82279 1406 aa15.13■□□□□ 0.01
APTX-230ENST00000494649 SEPT12Q8IYM1 358 aa15.13■□□□□ 0.01
APTX-230ENST00000494649 USHBP1Q8N6Y0 703 aa15.13■□□□□ 0.01
APTX-230ENST00000494649 FLT4P35916 1363 aa15.12■□□□□ 0.01
APTX-230ENST00000494649 FAM182BQ5T319 152 aa15.12■□□□□ 0.01
APTX-230ENST00000494649 TCP11L2Q8N4U5 519 aa15.12■□□□□ 0.01
APTX-230ENST00000494649 BLMP54132 1417 aaPredicted RBP15.11■□□□□ 0.01
APTX-230ENST00000494649 MTHFSP49914 203 aa15.1■□□□□ 0.01
APTX-230ENST00000494649 RTL1A6NKG5 1358 aa15.1■□□□□ 0.01
APTX-230ENST00000494649 NBPF6Q5VWK0 638 aa15.09■□□□□ 0.01
APTX-230ENST00000494649 NBPF4Q96M43 638 aa15.09■□□□□ 0.01
APTX-230ENST00000494649 RGPD2P0DJD1 1756 aa15.09■□□□□ 0.01
APTX-230ENST00000494649 INSRP06213 1382 aa15.08■□□□□ 0
APTX-230ENST00000494649 CARD10Q9BWT7 1032 aa15.08■□□□□ 0
APTX-230ENST00000494649 ABCC6O95255 1503 aa15.08■□□□□ 0
APTX-230ENST00000494649 NPC1L1Q9UHC9 1359 aa15.07■□□□□ 0
APTX-230ENST00000494649 SMG6Q86US8 1419 aaKnown RBP15.07■□□□□ 0
APTX-230ENST00000494649 EIF4A2Q14240 407 aaKnown RBP15.07■□□□□ 0
APTX-230ENST00000494649 BRWD3Q6RI45 1802 aa15.05■□□□□ 0
APTX-230ENST00000494649 ONECUT3O60422 494 aaPredicted RBP15.05■□□□□ 0
APTX-230ENST00000494649 BARGINQ6ZT62 677 aa15.05■□□□□ 0
APTX-230ENST00000494649 PPP2R1AP30153 589 aa15.05■□□□□ -0
APTX-230ENST00000494649 CDK12Q9NYV4 1490 aaPredicted RBP15.05■□□□□ -0
APTX-230ENST00000494649 KIF24Q5T7B8 1368 aa15.04■□□□□ -0
APTX-230ENST00000494649 KRT27Q7Z3Y8 459 aa15.04■□□□□ -0
APTX-230ENST00000494649 EYA1Q99502 592 aa15.04■□□□□ -0
APTX-230ENST00000494649 THRAP3Q9Y2W1 955 aaKnown RBP15.04■□□□□ -0
APTX-230ENST00000494649 THSD7AQ9UPZ6 1657 aa15.03■□□□□ -0
APTX-230ENST00000494649 IL2RBP14784 551 aa15.02■□□□□ -0
APTX-230ENST00000494649 PDE3BQ13370 1112 aa15.02■□□□□ -0
APTX-230ENST00000494649 DDB1Q16531 1140 aa15.02■□□□□ -0
APTX-230ENST00000494649 PARD3Q8TEW0 1356 aa15.01□□□□□ -0.01
APTX-230ENST00000494649 MEGF6O75095 1541 aa15.01□□□□□ -0.01
APTX-230ENST00000494649 AEBP1Q8IUX7 1158 aa15.01□□□□□ -0.01
APTX-230ENST00000494649 FAM208AQ9UK61 1670 aaKnown RBP15□□□□□ -0.01
APTX-230ENST00000494649 IL13P35225 146 aa15□□□□□ -0.01
APTX-230ENST00000494649 LRRC37A3O60309 1634 aa15□□□□□ -0.01
APTX-230ENST00000494649 DISP2A7MBM2 1401 aa15□□□□□ -0.01
APTX-230ENST00000494649 WNK3Q9BYP7 1800 aa14.99□□□□□ -0.01
APTX-230ENST00000494649 EXOC5O00471 708 aa14.99□□□□□ -0.01
APTX-230ENST00000494649 U2SURPO15042 1029 aaKnown RBP14.99□□□□□ -0.01
APTX-230ENST00000494649 HMOX1P09601 288 aa14.99□□□□□ -0.01
APTX-230ENST00000494649 DDX54Q8TDD1 881 aaKnown RBP14.99□□□□□ -0.01
APTX-230ENST00000494649 RAPGEF4Q8WZA2 1011 aa14.99□□□□□ -0.01
APTX-230ENST00000494649 DIAPH1O60610 1272 aaKnown RBP14.99□□□□□ -0.01
APTX-230ENST00000494649 SULT6B1Q6IMI4 303 aa14.98□□□□□ -0.01
APTX-230ENST00000494649 MARCH10Q8NA82 808 aaPredicted RBP14.97□□□□□ -0.01
APTX-230ENST00000494649 PARP4Q9UKK3 1724 aaKnown RBP14.97□□□□□ -0.01
APTX-230ENST00000494649 PRKRIP1Q9H875 184 aaPredicted RBP14.97□□□□□ -0.01
APTX-230ENST00000494649 IGSF1Q8N6C5 1336 aa14.97□□□□□ -0.01
APTX-230ENST00000494649 TATP17735 454 aaPredicted RBP14.96□□□□□ -0.01
APTX-230ENST00000494649 RALBP1Q15311 655 aa14.96□□□□□ -0.01
APTX-230ENST00000494649 CFAP53Q96M91 514 aa14.96□□□□□ -0.01
APTX-230ENST00000494649 CDCA7Q9BWT1 371 aaPredicted RBP14.96□□□□□ -0.01
APTX-230ENST00000494649 COL3A1P02461 1466 aaPredicted RBP14.96□□□□□ -0.02
APTX-230ENST00000494649 UPF1Q92900 1129 aaKnown RBP eCLIP14.95□□□□□ -0.02
APTX-230ENST00000494649 TNS2Q63HR2 1409 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms