RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 PHRF1Q9P1Y6 1649 aaKnown RBP27.25■■□□□ 1.95
KPNA1-210ENST00000494339 RTL1A6NKG5 1358 aa27.25■■□□□ 1.95
KPNA1-210ENST00000494339 ARHGEF25Q86VW2 580 aa27.24■■□□□ 1.95
KPNA1-210ENST00000494339 FCHSD2O94868 740 aa27.24■■□□□ 1.95
KPNA1-210ENST00000494339 PLEKHF1Q96S99 279 aa27.24■■□□□ 1.95
KPNA1-210ENST00000494339 CRYBG1Q9Y4K1 1723 aa27.23■■□□□ 1.95
KPNA1-210ENST00000494339 TOM1O60784 492 aa27.23■■□□□ 1.95
KPNA1-210ENST00000494339 TCP11L2Q8N4U5 519 aa27.23■■□□□ 1.95
KPNA1-210ENST00000494339 IP6K1Q92551 441 aa27.23■■□□□ 1.95
KPNA1-210ENST00000494339 RSPH6AQ9H0K4 717 aa27.23■■□□□ 1.95
KPNA1-210ENST00000494339 ZC3H6P61129 1189 aaKnown RBP27.22■■□□□ 1.95
KPNA1-210ENST00000494339 IQSEC2Q5JU85 1478 aa27.22■■□□□ 1.95
KPNA1-210ENST00000494339 PRKAR2BP31323 418 aa27.21■■□□□ 1.95
KPNA1-210ENST00000494339 LTV1Q96GA3 475 aaPredicted RBP27.21■■□□□ 1.95
KPNA1-210ENST00000494339 RRP7AQ9Y3A4 280 aaKnown RBP27.21■■□□□ 1.95
KPNA1-210ENST00000494339 RGPD1P0DJD0 1748 aa27.2■■□□□ 1.95
KPNA1-210ENST00000494339 PIP4K2BP78356 416 aa27.2■■□□□ 1.95
KPNA1-210ENST00000494339 NEUROD2Q15784 382 aa27.2■■□□□ 1.95
KPNA1-210ENST00000494339 PNNQ9H307 717 aaKnown RBP27.2■■□□□ 1.95
KPNA1-210ENST00000494339 MAPK8IP3Q9UPT6 1336 aa27.2■■□□□ 1.95
KPNA1-210ENST00000494339 AHDC1Q5TGY3 1603 aaPredicted RBP27.19■■□□□ 1.94
KPNA1-210ENST00000494339 SULT6B1Q6IMI4 303 aa27.18■■□□□ 1.94
KPNA1-210ENST00000494339 AEBP1Q8IUX7 1158 aa27.18■■□□□ 1.94
KPNA1-210ENST00000494339 UBAP1LF5GYI3 381 aa27.17■■□□□ 1.94
KPNA1-210ENST00000494339 EYA1Q99502 592 aa27.16■■□□□ 1.94
KPNA1-210ENST00000494339 ZNF521Q96K83 1311 aa27.14■■□□□ 1.94
KPNA1-210ENST00000494339 NEFMP07197 916 aa27.14■■□□□ 1.94
KPNA1-210ENST00000494339 NGEFQ8N5V2 710 aa27.14■■□□□ 1.94
KPNA1-210ENST00000494339 RGPD5Q99666 1765 aa27.14■■□□□ 1.93
KPNA1-210ENST00000494339 LRRC59Q96AG4 307 aaKnown RBP27.14■■□□□ 1.93
KPNA1-210ENST00000494339 CDCA7LQ96GN5 454 aa27.14■■□□□ 1.93
KPNA1-210ENST00000494339 PHACTR3Q96KR7 559 aa27.14■■□□□ 1.93
KPNA1-210ENST00000494339 HAP1P54257 671 aaPredicted RBP27.13■■□□□ 1.93
KPNA1-210ENST00000494339 PDE3BQ13370 1112 aa27.13■■□□□ 1.93
KPNA1-210ENST00000494339 AXIN2Q9Y2T1 843 aa27.13■■□□□ 1.93
KPNA1-210ENST00000494339 IGSF1Q8N6C5 1336 aa27.13■■□□□ 1.93
KPNA1-210ENST00000494339 ABCA3Q99758 1704 aa27.12■■□□□ 1.93
KPNA1-210ENST00000494339 PHLPP1O60346 1717 aa27.12■■□□□ 1.93
KPNA1-210ENST00000494339 TMPOP42166 694 aaKnown RBP27.12■■□□□ 1.93
KPNA1-210ENST00000494339 KIAA0232Q92628 1395 aa27.12■■□□□ 1.93
KPNA1-210ENST00000494339 CHRNA2Q15822 529 aa27.1■■□□□ 1.93
KPNA1-210ENST00000494339 WWC1Q8IX03 1113 aa27.1■■□□□ 1.93
KPNA1-210ENST00000494339 RGPD2P0DJD1 1756 aa27.09■■□□□ 1.93
KPNA1-210ENST00000494339 COL18A1P39060 1754 aa27.09■■□□□ 1.93
KPNA1-210ENST00000494339 CPDO75976 1380 aa27.08■■□□□ 1.93
KPNA1-210ENST00000494339 ANKRD24Q8TF21 1146 aa27.08■■□□□ 1.93
KPNA1-210ENST00000494339 GOLGA2Q08379 1002 aa27.08■■□□□ 1.93
KPNA1-210ENST00000494339 KDRP35968 1356 aa27.07■■□□□ 1.92
KPNA1-210ENST00000494339 RIPK4P57078 832 aa27.07■■□□□ 1.92
KPNA1-210ENST00000494339 USHBP1Q8N6Y0 703 aa27.07■■□□□ 1.92
KPNA1-210ENST00000494339 COL16A1Q07092 1604 aaPredicted RBP27.07■■□□□ 1.92
KPNA1-210ENST00000494339 PHF23Q9BUL5 403 aaPredicted RBP27.06■■□□□ 1.92
KPNA1-210ENST00000494339 CCDC27Q2M243 656 aa27.06■■□□□ 1.92
KPNA1-210ENST00000494339 NBPF6Q5VWK0 638 aa27.06■■□□□ 1.92
KPNA1-210ENST00000494339 NBPF4Q96M43 638 aa27.06■■□□□ 1.92
KPNA1-210ENST00000494339 PRDM11Q9NQV5 511 aa27.06■■□□□ 1.92
KPNA1-210ENST00000494339 NFE2L2Q16236 605 aa27.04■■□□□ 1.92
KPNA1-210ENST00000494339 NCBP3Q53F19 620 aaKnown RBP27.04■■□□□ 1.92
KPNA1-210ENST00000494339 ERBB3P21860 1342 aa27.04■■□□□ 1.92
KPNA1-210ENST00000494339 TRIM35Q9UPQ4 493 aa27.03■■□□□ 1.92
KPNA1-210ENST00000494339 SPINK5Q9NQ38 1064 aaPredicted RBP27.02■■□□□ 1.92
KPNA1-210ENST00000494339 ABCC6O95255 1503 aa27.02■■□□□ 1.92
KPNA1-210ENST00000494339 DLG5Q8TDM6 1919 aa27.01■■□□□ 1.92
KPNA1-210ENST00000494339 COL22A1Q8NFW1 1626 aaPredicted RBP27.01■■□□□ 1.91
KPNA1-210ENST00000494339 SLFN5Q08AF3 891 aa27■■□□□ 1.91
KPNA1-210ENST00000494339 WDR63Q8IWG1 891 aa26.98■■□□□ 1.91
KPNA1-210ENST00000494339 E9PSI1 815 aa26.97■■□□□ 1.91
KPNA1-210ENST00000494339 CSB-PGBD3P0DP91 1061 aa26.97■■□□□ 1.91
KPNA1-210ENST00000494339 DUSP27Q5VZP5 1158 aa26.97■■□□□ 1.91
KPNA1-210ENST00000494339 LMO7Q8WWI1 1683 aa26.96■■□□□ 1.91
KPNA1-210ENST00000494339 CAMTA1Q9Y6Y1 1673 aa26.96■■□□□ 1.91
KPNA1-210ENST00000494339 NLRP2Q9NX02 1062 aa26.95■■□□□ 1.9
KPNA1-210ENST00000494339 FAM83GA6ND36 823 aa26.94■■□□□ 1.9
KPNA1-210ENST00000494339 MTHFSDQ2M296 383 aaKnown RBP26.94■■□□□ 1.9
KPNA1-210ENST00000494339 SUPT16HQ9Y5B9 1047 aaKnown RBP26.94■■□□□ 1.9
KPNA1-210ENST00000494339 NCAPD2Q15021 1401 aa26.93■■□□□ 1.9
KPNA1-210ENST00000494339 TRMT2AQ8IZ69 625 aaKnown RBP26.93■■□□□ 1.9
KPNA1-210ENST00000494339 FAM208AQ9UK61 1670 aaKnown RBP26.92■■□□□ 1.9
KPNA1-210ENST00000494339 THUMPD2Q9BTF0 503 aaKnown RBP26.92■■□□□ 1.9
KPNA1-210ENST00000494339 LMOD3Q0VAK6 560 aa26.91■■□□□ 1.9
KPNA1-210ENST00000494339 NEFLP07196 543 aa26.9■■□□□ 1.9
KPNA1-210ENST00000494339 GAS2L2Q8NHY3 880 aa26.9■■□□□ 1.9
KPNA1-210ENST00000494339 COL5A2P05997 1499 aaPredicted RBP26.9■■□□□ 1.9
KPNA1-210ENST00000494339 DCTN1Q14203 1278 aa26.88■■□□□ 1.89
KPNA1-210ENST00000494339 HSPA1LP34931 641 aa26.88■■□□□ 1.89
KPNA1-210ENST00000494339 NUTM2BA6NNL0 878 aaPredicted RBP26.87■■□□□ 1.89
KPNA1-210ENST00000494339 NUTM2EB1AL46 878 aaPredicted RBP26.87■■□□□ 1.89
KPNA1-210ENST00000494339 NUTM2AQ8IVF1 878 aaPredicted RBP26.87■■□□□ 1.89
KPNA1-210ENST00000494339 STRN4Q9NRL3 753 aa26.87■■□□□ 1.89
KPNA1-210ENST00000494339 WDR17Q8IZU2 1322 aa26.87■■□□□ 1.89
KPNA1-210ENST00000494339 ADAMTS2O95450 1211 aa26.86■■□□□ 1.89
KPNA1-210ENST00000494339 MYH16Q9H6N6 1097 aa26.86■■□□□ 1.89
KPNA1-210ENST00000494339 IL16Q14005 1332 aa26.86■■□□□ 1.89
KPNA1-210ENST00000494339 COL14A1Q05707 1796 aaKnown RBP26.86■■□□□ 1.89
KPNA1-210ENST00000494339 EVA1CP58658 441 aa26.85■■□□□ 1.89
KPNA1-210ENST00000494339 TOM1L2Q6ZVM7 507 aa26.85■■□□□ 1.89
KPNA1-210ENST00000494339 BTG4Q9NY30 223 aa26.85■■□□□ 1.89
KPNA1-210ENST00000494339 RCAN3Q9UKA8 241 aa26.85■■□□□ 1.89
KPNA1-210ENST00000494339 MCM10Q7L590 875 aa26.84■■□□□ 1.89
KPNA1-210ENST00000494339 TSR2Q969E8 191 aaKnown RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms