RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 FKBPLQ9UIM3 349 aa10.54□□□□□ -0.72
PHC3-213ENST00000491258 DNMT3LQ9UJW3 386 aa10.54□□□□□ -0.72
PHC3-213ENST00000491258 NR6A1Q15406 480 aa10.53□□□□□ -0.72
PHC3-213ENST00000491258 SKIV2LQ15477 1246 aaKnown RBP10.53□□□□□ -0.72
PHC3-213ENST00000491258 PDXDC2PQ6P474 469 aa10.53□□□□□ -0.72
PHC3-213ENST00000491258 PROCA1Q8NCQ7 364 aaPredicted RBP10.53□□□□□ -0.72
PHC3-213ENST00000491258 SLC10A4Q96EP9 437 aa10.53□□□□□ -0.72
PHC3-213ENST00000491258 GPBP1L1Q9HC44 474 aaPredicted RBP10.53□□□□□ -0.72
PHC3-213ENST00000491258 PGPEP1Q9NXJ5 209 aa10.53□□□□□ -0.72
PHC3-213ENST00000491258 PPP1R26Q5T8A7 1209 aaPredicted RBP10.52□□□□□ -0.73
PHC3-213ENST00000491258 ZBTB33Q86T24 672 aa10.52□□□□□ -0.73
PHC3-213ENST00000491258 CBLBQ13191 982 aa10.51□□□□□ -0.73
PHC3-213ENST00000491258 SH3D19Q5HYK7 790 aa10.51□□□□□ -0.73
PHC3-213ENST00000491258 FBXO31Q5XUX0 539 aaPredicted RBP10.51□□□□□ -0.73
PHC3-213ENST00000491258 KCTD15Q96SI1 283 aaPredicted RBP10.51□□□□□ -0.73
PHC3-213ENST00000491258 KDM4CQ9H3R0 1056 aa10.51□□□□□ -0.73
PHC3-213ENST00000491258 TTLL8A6PVC2 850 aa10.5□□□□□ -0.73
PHC3-213ENST00000491258 FIGNL2A6NMB9 653 aa10.49□□□□□ -0.73
PHC3-213ENST00000491258 AP1G2O75843 785 aa10.49□□□□□ -0.73
PHC3-213ENST00000491258 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.49□□□□□ -0.733e-6■■■□□ 15.3
PHC3-213ENST00000491258 FAM117AQ9C073 453 aa10.49□□□□□ -0.73
PHC3-213ENST00000491258 CDV3Q9UKY7 258 aaKnown RBP10.49□□□□□ -0.73
PHC3-213ENST00000491258 SUZ12Q15022 739 aaKnown RBP10.48□□□□□ -0.73
PHC3-213ENST00000491258 DDRGK1Q96HY6 314 aa10.48□□□□□ -0.73
PHC3-213ENST00000491258 ZC3H4Q9UPT8 1303 aaKnown RBP10.48□□□□□ -0.73
PHC3-213ENST00000491258 PTK2Q05397 1052 aa10.47□□□□□ -0.73
PHC3-213ENST00000491258 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.47□□□□□ -0.73
PHC3-213ENST00000491258 DHX9Q08211 1270 aaKnown RBP10.46□□□□□ -0.73
PHC3-213ENST00000491258 PPP2R2DQ66LE6 453 aa10.46□□□□□ -0.73
PHC3-213ENST00000491258 Q6ZVU0 165 aa10.46□□□□□ -0.73
PHC3-213ENST00000491258 PTSQ03393 145 aa10.45□□□□□ -0.74
PHC3-213ENST00000491258 SPINT1O43278 529 aa10.44□□□□□ -0.74
PHC3-213ENST00000491258 INTS6LQ5JSJ4 861 aaKnown RBP10.44□□□□□ -0.74
PHC3-213ENST00000491258 ADAM32Q8TC27 787 aa10.44□□□□□ -0.74
PHC3-213ENST00000491258 AGBL1Q96MI9 1066 aa10.44□□□□□ -0.74
PHC3-213ENST00000491258 RAB15P59190 212 aa10.43□□□□□ -0.74
PHC3-213ENST00000491258 EPS8L1Q8TE68 723 aa10.43□□□□□ -0.74
PHC3-213ENST00000491258 OCSTAMPQ9BR26 566 aa10.43□□□□□ -0.74
PHC3-213ENST00000491258 RELBQ01201 579 aa10.42□□□□□ -0.74
PHC3-213ENST00000491258 PNMA1Q8ND90 353 aa10.42□□□□□ -0.74
PHC3-213ENST00000491258 GPSM3Q9Y4H4 160 aa10.42□□□□□ -0.74
PHC3-213ENST00000491258 GSK3AP49840 483 aa10.41□□□□□ -0.74
PHC3-213ENST00000491258 HMX1Q9NP08 348 aaPredicted RBP10.41□□□□□ -0.74
PHC3-213ENST00000491258 USP17L8P0C7I0 530 aa10.4□□□□□ -0.74
PHC3-213ENST00000491258 NBPF20Q3BBV1 942 aa10.4□□□□□ -0.74
PHC3-213ENST00000491258 CCDC155Q8N6L0 562 aa10.4□□□□□ -0.74
PHC3-213ENST00000491258 GPR161Q8N6U8 529 aaKnown RBP10.4□□□□□ -0.74
PHC3-213ENST00000491258 CNTNAP3BQ96NU0 1288 aa10.4□□□□□ -0.74
PHC3-213ENST00000491258 CNTNAP3Q9BZ76 1288 aa10.4□□□□□ -0.74
PHC3-213ENST00000491258 CTSOP43234 321 aaPredicted RBP10.39□□□□□ -0.75
PHC3-213ENST00000491258 KCNMA1Q12791 1236 aa10.39□□□□□ -0.75
PHC3-213ENST00000491258 DZIP3Q86Y13 1208 aaKnown RBP10.39□□□□□ -0.75
PHC3-213ENST00000491258 INSM2Q96T92 566 aaPredicted RBP10.39□□□□□ -0.75
PHC3-213ENST00000491258 POLMQ9NP87 494 aaPredicted RBP10.39□□□□□ -0.75
PHC3-213ENST00000491258 TMPRSS4Q9NRS4 437 aa10.39□□□□□ -0.75
PHC3-213ENST00000491258 ZNF395Q9H8N7 513 aaPredicted RBP10.38□□□□□ -0.75
PHC3-213ENST00000491258 KRT76Q01546 638 aa10.37□□□□□ -0.75
PHC3-213ENST00000491258 RFC5P40937 340 aa10.36□□□□□ -0.75
PHC3-213ENST00000491258 ZNF784Q8NCA9 323 aaPredicted RBP10.36□□□□□ -0.75
PHC3-213ENST00000491258 COL25A1Q9BXS0 654 aaPredicted RBP10.36□□□□□ -0.75
PHC3-213ENST00000491258 SLC35F4A4IF30 521 aa10.35□□□□□ -0.75
PHC3-213ENST00000491258 CDC14CA4D256 554 aa10.34□□□□□ -0.75
PHC3-213ENST00000491258 ERVH48-1M5A8F1 160 aa10.33□□□□□ -0.76
PHC3-213ENST00000491258 ADH1AP07327 375 aa10.33□□□□□ -0.76
PHC3-213ENST00000491258 VWA5B2Q8N398 1253 aa10.33□□□□□ -0.76
PHC3-213ENST00000491258 KCTD17Q8N5Z5 321 aa10.33□□□□□ -0.76
PHC3-213ENST00000491258 RNF217Q8TC41 542 aa10.33□□□□□ -0.76
PHC3-213ENST00000491258 NANOS1Q8WY41 292 aaKnown RBP10.33□□□□□ -0.76
PHC3-213ENST00000491258 BCANQ96GW7 911 aa10.33□□□□□ -0.76
PHC3-213ENST00000491258 ITGA6P23229 1130 aa10.32□□□□□ -0.76
PHC3-213ENST00000491258 SV2AQ7L0J3 742 aa10.31□□□□□ -0.76
PHC3-213ENST00000491258 LILRA1O75019 489 aa10.3□□□□□ -0.76
PHC3-213ENST00000491258 ADD1P35611 737 aaKnown RBP10.3□□□□□ -0.76
PHC3-213ENST00000491258 PTGIRP43119 386 aa10.3□□□□□ -0.76
PHC3-213ENST00000491258 RNFT1Q5M7Z0 435 aa10.3□□□□□ -0.76
PHC3-213ENST00000491258 PCMTD1Q96MG8 357 aaPredicted RBP10.3□□□□□ -0.76
PHC3-213ENST00000491258 ESPNB1AK53 854 aa10.29□□□□□ -0.76
PHC3-213ENST00000491258 FOXD4L5Q5VV16 416 aaPredicted RBP10.29□□□□□ -0.76
PHC3-213ENST00000491258 CYLDQ9NQC7 956 aa10.29□□□□□ -0.76
PHC3-213ENST00000491258 TRIM34Q9BYJ4 488 aa10.28□□□□□ -0.76
PHC3-213ENST00000491258 SVOPQ8N4V2 548 aa10.27□□□□□ -0.77
PHC3-213ENST00000491258 PCDHB9Q9Y5E1 797 aa10.27□□□□□ -0.77
PHC3-213ENST00000491258 SENP3-EIF4A1A0A087X0R7 540 aa10.26□□□□□ -0.77
PHC3-213ENST00000491258 TMEM259Q4ZIN3 620 aa10.26□□□□□ -0.77
PHC3-213ENST00000491258 KDF1Q8NAX2 398 aaPredicted RBP10.26□□□□□ -0.77
PHC3-213ENST00000491258 ADAMTS8Q9UP79 889 aa10.26□□□□□ -0.77
PHC3-213ENST00000491258 ZBBXA8MT70 800 aa10.25□□□□□ -0.77
PHC3-213ENST00000491258 ZNF385CQ66K41 422 aaPredicted RBP10.25□□□□□ -0.77
PHC3-213ENST00000491258 LYSMD3Q7Z3D4 306 aa10.25□□□□□ -0.77
PHC3-213ENST00000491258 SEPT12Q8IYM1 358 aa10.25□□□□□ -0.77
PHC3-213ENST00000491258 TMEM151AQ8N4L1 468 aa10.24□□□□□ -0.77
PHC3-213ENST00000491258 TRIM52Q96A61 297 aa10.24□□□□□ -0.77
PHC3-213ENST00000491258 RASSF7Q02833 373 aa10.23□□□□□ -0.77
PHC3-213ENST00000491258 PRICKLE2Q7Z3G6 844 aa10.23□□□□□ -0.77
PHC3-213ENST00000491258 WHAMMQ8TF30 809 aa10.23□□□□□ -0.77
PHC3-213ENST00000491258 GOPCQ9HD26 462 aa10.23□□□□□ -0.77
PHC3-213ENST00000491258 RNF225M0QZC1 329 aaPredicted RBP10.22□□□□□ -0.77
PHC3-213ENST00000491258 GIGYF1O75420 1035 aaPredicted RBP10.22□□□□□ -0.77
PHC3-213ENST00000491258 RHOQP17081 205 aa10.22□□□□□ -0.77
PHC3-213ENST00000491258 NEUROD2Q15784 382 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms