RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 LINC00528Q8N1L1 170 aa7.35□□□□□ -1.23
KDM3A-213ENST00000488971 CARD14Q9BXL6 1004 aa7.35□□□□□ -1.23
KDM3A-213ENST00000488971 C1orf115Q9H7X2 142 aa7.35□□□□□ -1.23
KDM3A-213ENST00000488971 ATP1B4Q9UN42 357 aaPredicted RBP7.35□□□□□ -1.23
KDM3A-213ENST00000488971 SH3RF1Q7Z6J0 888 aa7.34□□□□□ -1.23
KDM3A-213ENST00000488971 C1QTNF2Q9BXJ5 285 aa7.34□□□□□ -1.23
KDM3A-213ENST00000488971 SH3BP5LQ7L8J4 393 aa7.33□□□□□ -1.24
KDM3A-213ENST00000488971 MEIOBQ8N635 442 aa7.33□□□□□ -1.24
KDM3A-213ENST00000488971 GPKOWQ92917 476 aaPredicted RBP eCLIP7.33□□□□□ -1.24
KDM3A-213ENST00000488971 MAP4K5Q9Y4K4 846 aa7.33□□□□□ -1.24
KDM3A-213ENST00000488971 CTDSPL2Q05D32 466 aa7.32□□□□□ -1.24
KDM3A-213ENST00000488971 TRMT44Q8IYL2 757 aaKnown RBP7.32□□□□□ -1.24
KDM3A-213ENST00000488971 CCDC116Q8IYX3 515 aa7.32□□□□□ -1.24
KDM3A-213ENST00000488971 TSEN34Q9BSV6 310 aaKnown RBP7.32□□□□□ -1.24
KDM3A-213ENST00000488971 EMILIN1Q9Y6C2 1016 aa7.32□□□□□ -1.24
KDM3A-213ENST00000488971 PCMTD1Q96MG8 357 aaPredicted RBP7.31□□□□□ -1.24
KDM3A-213ENST00000488971 A6NJR5 290 aa7.3□□□□□ -1.24
KDM3A-213ENST00000488971 PPFIA3O75145 1194 aa7.3□□□□□ -1.24
KDM3A-213ENST00000488971 LORP23490 312 aaPredicted RBP7.3□□□□□ -1.24
KDM3A-213ENST00000488971 ERFEQ4G0M1 354 aa7.3□□□□□ -1.24
KDM3A-213ENST00000488971 SH3D19Q5HYK7 790 aa7.3□□□□□ -1.24
KDM3A-213ENST00000488971 ARHGAP9Q9BRR9 750 aa7.3□□□□□ -1.24
KDM3A-213ENST00000488971 SOS2Q07890 1332 aaPredicted RBP7.29□□□□□ -1.24
KDM3A-213ENST00000488971 VSIG8P0DPA2 414 aa7.29□□□□□ -1.24
KDM3A-213ENST00000488971 PGPEP1Q9NXJ5 209 aa7.29□□□□□ -1.24
KDM3A-213ENST00000488971 PODXL2Q9NZ53 605 aa7.29□□□□□ -1.24
KDM3A-213ENST00000488971 DNMT3LQ9UJW3 386 aa7.29□□□□□ -1.24
KDM3A-213ENST00000488971 APBB1O00213 710 aa7.28□□□□□ -1.24
KDM3A-213ENST00000488971 PPP1R26Q5T8A7 1209 aaPredicted RBP7.28□□□□□ -1.24
KDM3A-213ENST00000488971 PDXDC2PQ6P474 469 aa7.28□□□□□ -1.24
KDM3A-213ENST00000488971 ZBTB33Q86T24 672 aa7.28□□□□□ -1.24
KDM3A-213ENST00000488971 LRRN4Q8WUT4 740 aa7.28□□□□□ -1.24
KDM3A-213ENST00000488971 SLC10A4Q96EP9 437 aa7.28□□□□□ -1.24
KDM3A-213ENST00000488971 ARID3CA6NKF2 412 aa7.27□□□□□ -1.25
KDM3A-213ENST00000488971 FIGNL2A6NMB9 653 aa7.27□□□□□ -1.25
KDM3A-213ENST00000488971 TTLL8A6PVC2 850 aa7.27□□□□□ -1.25
KDM3A-213ENST00000488971 CBLBQ13191 982 aa7.27□□□□□ -1.25
KDM3A-213ENST00000488971 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.27□□□□□ -1.25
KDM3A-213ENST00000488971 ARID3AQ99856 593 aa7.27□□□□□ -1.25
KDM3A-213ENST00000488971 FKBPLQ9UIM3 349 aa7.27□□□□□ -1.25
KDM3A-213ENST00000488971 DHX9Q08211 1270 aaKnown RBP7.26□□□□□ -1.25
KDM3A-213ENST00000488971 MCM6Q14566 821 aa7.26□□□□□ -1.25
KDM3A-213ENST00000488971 NR6A1Q15406 480 aa7.26□□□□□ -1.25
KDM3A-213ENST00000488971 SKIV2LQ15477 1246 aaKnown RBP7.26□□□□□ -1.25
KDM3A-213ENST00000488971 KCTD15Q96SI1 283 aaPredicted RBP7.26□□□□□ -1.25
KDM3A-213ENST00000488971 CDV3Q9UKY7 258 aaKnown RBP7.26□□□□□ -1.25
KDM3A-213ENST00000488971 TRAK2O60296 914 aa7.25□□□□□ -1.25
KDM3A-213ENST00000488971 PTK2Q05397 1052 aa7.25□□□□□ -1.25
KDM3A-213ENST00000488971 AP1G2O75843 785 aa7.24□□□□□ -1.25
KDM3A-213ENST00000488971 PROCA1Q8NCQ7 364 aaPredicted RBP7.24□□□□□ -1.25
KDM3A-213ENST00000488971 CLUAP1Q96AJ1 413 aa7.24□□□□□ -1.25
KDM3A-213ENST00000488971 ZC3H4Q9UPT8 1303 aaKnown RBP7.24□□□□□ -1.25
KDM3A-213ENST00000488971 PTSQ03393 145 aa7.23□□□□□ -1.25
KDM3A-213ENST00000488971 TRIM26Q12899 539 aaPredicted RBP7.23□□□□□ -1.25
KDM3A-213ENST00000488971 Q6ZVU0 165 aa7.23□□□□□ -1.25
KDM3A-213ENST00000488971 SPINT1O43278 529 aa7.22□□□□□ -1.25
KDM3A-213ENST00000488971 PNMA1Q8ND90 353 aa7.22□□□□□ -1.25
KDM3A-213ENST00000488971 RAB15P59190 212 aa7.21□□□□□ -1.26
KDM3A-213ENST00000488971 RELBQ01201 579 aa7.21□□□□□ -1.26
KDM3A-213ENST00000488971 INTS6LQ5JSJ4 861 aaKnown RBP7.21□□□□□ -1.26
KDM3A-213ENST00000488971 ADAM32Q8TC27 787 aa7.21□□□□□ -1.26
KDM3A-213ENST00000488971 AGBL1Q96MI9 1066 aa7.21□□□□□ -1.26
KDM3A-213ENST00000488971 CNTNAP3BQ96NU0 1288 aa7.21□□□□□ -1.26
KDM3A-213ENST00000488971 CNTNAP3Q9BZ76 1288 aa7.21□□□□□ -1.26
KDM3A-213ENST00000488971 FBXO31Q5XUX0 539 aaPredicted RBP7.2□□□□□ -1.26
KDM3A-213ENST00000488971 PPP2R2DQ66LE6 453 aa7.2□□□□□ -1.26
KDM3A-213ENST00000488971 CCDC82Q8N4S0 544 aa7.2□□□□□ -1.26
KDM3A-213ENST00000488971 CCDC155Q8N6L0 562 aa7.2□□□□□ -1.26
KDM3A-213ENST00000488971 GPR161Q8N6U8 529 aaKnown RBP7.2□□□□□ -1.26
KDM3A-213ENST00000488971 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.2□□□□□ -1.26
KDM3A-213ENST00000488971 POLMQ9NP87 494 aaPredicted RBP7.2□□□□□ -1.26
KDM3A-213ENST00000488971 GPSM3Q9Y4H4 160 aa7.2□□□□□ -1.26
KDM3A-213ENST00000488971 NBPF20Q3BBV1 942 aa7.19□□□□□ -1.26
KDM3A-213ENST00000488971 DZIP3Q86Y13 1208 aaKnown RBP7.19□□□□□ -1.26
KDM3A-213ENST00000488971 CTSOP43234 321 aaPredicted RBP7.18□□□□□ -1.26
KDM3A-213ENST00000488971 PROSER2Q86WR7 435 aaPredicted RBP7.18□□□□□ -1.26
KDM3A-213ENST00000488971 FNBP4Q8N3X1 1017 aaPredicted RBP7.18□□□□□ -1.26
KDM3A-213ENST00000488971 INSM2Q96T92 566 aaPredicted RBP7.18□□□□□ -1.26
KDM3A-213ENST00000488971 COL25A1Q9BXS0 654 aaPredicted RBP7.18□□□□□ -1.26
KDM3A-213ENST00000488971 ZNF395Q9H8N7 513 aaPredicted RBP7.18□□□□□ -1.26
KDM3A-213ENST00000488971 TMPRSS4Q9NRS4 437 aa7.18□□□□□ -1.26
KDM3A-213ENST00000488971 CDC14CA4D256 554 aa7.17□□□□□ -1.26
KDM3A-213ENST00000488971 KRT76Q01546 638 aa7.17□□□□□ -1.26
KDM3A-213ENST00000488971 EPS8L1Q8TE68 723 aa7.17□□□□□ -1.26
KDM3A-213ENST00000488971 OCSTAMPQ9BR26 566 aa7.17□□□□□ -1.26
KDM3A-213ENST00000488971 SLC35F4A4IF30 521 aa7.16□□□□□ -1.26
KDM3A-213ENST00000488971 USP17L8P0C7I0 530 aa7.16□□□□□ -1.26
KDM3A-213ENST00000488971 VWA5B2Q8N398 1253 aa7.16□□□□□ -1.26
KDM3A-213ENST00000488971 NANOS1Q8WY41 292 aaKnown RBP7.16□□□□□ -1.26
KDM3A-213ENST00000488971 RAD21O60216 631 aa7.15□□□□□ -1.26
KDM3A-213ENST00000488971 SV2AQ7L0J3 742 aa7.15□□□□□ -1.26
KDM3A-213ENST00000488971 ZNF784Q8NCA9 323 aaPredicted RBP7.15□□□□□ -1.26
KDM3A-213ENST00000488971 HMX1Q9NP08 348 aaPredicted RBP7.15□□□□□ -1.26
KDM3A-213ENST00000488971 ERVH48-1M5A8F1 160 aa7.14□□□□□ -1.27
KDM3A-213ENST00000488971 ADH1AP07327 375 aa7.14□□□□□ -1.27
KDM3A-213ENST00000488971 PDIA4P13667 645 aaKnown RBP7.14□□□□□ -1.27
KDM3A-213ENST00000488971 ITGA6P23229 1130 aa7.14□□□□□ -1.27
KDM3A-213ENST00000488971 BANK1Q8NDB2 785 aa7.14□□□□□ -1.27
KDM3A-213ENST00000488971 RFC5P40937 340 aa7.13□□□□□ -1.27
KDM3A-213ENST00000488971 KCNMA1Q12791 1236 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms