RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 VPS72Q15906 364 aa21.71■■□□□ 1.07
HDAC7-224ENST00000488927 IP6K1Q92551 441 aa21.71■■□□□ 1.07
HDAC7-224ENST00000488927 BLMP54132 1417 aaPredicted RBP21.71■■□□□ 1.07
HDAC7-224ENST00000488927 CAMTA1Q9Y6Y1 1673 aa21.7■■□□□ 1.06
HDAC7-224ENST00000488927 RRS1Q15050 365 aaKnown RBP21.7■■□□□ 1.06
HDAC7-224ENST00000488927 ATRNO75882 1429 aa21.7■■□□□ 1.06
HDAC7-224ENST00000488927 TNNT2P45379 298 aaPredicted RBP21.69■■□□□ 1.06
HDAC7-224ENST00000488927 COL5A2P05997 1499 aaPredicted RBP21.69■■□□□ 1.06
HDAC7-224ENST00000488927 LTN1O94822 1766 aa21.69■■□□□ 1.06
HDAC7-224ENST00000488927 FBLN1P23142 703 aa21.68■■□□□ 1.06
HDAC7-224ENST00000488927 HOXC9P31274 260 aa21.68■■□□□ 1.06
HDAC7-224ENST00000488927 STRN4Q9NRL3 753 aa21.68■■□□□ 1.06
HDAC7-224ENST00000488927 AXIN2Q9Y2T1 843 aa21.68■■□□□ 1.06
HDAC7-224ENST00000488927 FLT4P35916 1363 aa21.68■■□□□ 1.06
HDAC7-224ENST00000488927 COL18A1P39060 1754 aa21.68■■□□□ 1.06
HDAC7-224ENST00000488927 NRAPQ86VF7 1730 aa21.67■■□□□ 1.06
HDAC7-224ENST00000488927 RBM6P78332 1123 aaKnown RBP21.66■■□□□ 1.06
HDAC7-224ENST00000488927 POTEAQ6S8J7 498 aa21.66■■□□□ 1.06
HDAC7-224ENST00000488927 GJD4Q96KN9 370 aaPredicted RBP21.66■■□□□ 1.06
HDAC7-224ENST00000488927 POLKQ9UBT6 870 aa21.66■■□□□ 1.06
HDAC7-224ENST00000488927 CCDC9Q9Y3X0 531 aaKnown RBP21.66■■□□□ 1.06
HDAC7-224ENST00000488927 WDR17Q8IZU2 1322 aa21.65■■□□□ 1.06
HDAC7-224ENST00000488927 RXRBP28702 533 aa21.65■■□□□ 1.06
HDAC7-224ENST00000488927 EMILIN1Q9Y6C2 1016 aa21.65■■□□□ 1.06
HDAC7-224ENST00000488927 INSRP06213 1382 aa21.64■■□□□ 1.06
HDAC7-224ENST00000488927 ERBB3P21860 1342 aa21.64■■□□□ 1.05
HDAC7-224ENST00000488927 CSB-PGBD3P0DP91 1061 aa21.64■■□□□ 1.05
HDAC7-224ENST00000488927 SMG6Q86US8 1419 aaKnown RBP21.63■■□□□ 1.05
HDAC7-224ENST00000488927 SPATA31A5Q5VU36 1347 aa21.63■■□□□ 1.05
HDAC7-224ENST00000488927 SPATA31A7Q8IWB4 1347 aa21.63■■□□□ 1.05
HDAC7-224ENST00000488927 PPM1GO15355 546 aaPredicted RBP21.63■■□□□ 1.05
HDAC7-224ENST00000488927 ANKRD24Q8TF21 1146 aa21.63■■□□□ 1.05
HDAC7-224ENST00000488927 CRB1P82279 1406 aa21.63■■□□□ 1.05
HDAC7-224ENST00000488927 CNGB1Q14028 1251 aaPredicted RBP21.62■■□□□ 1.05
HDAC7-224ENST00000488927 LARP1Q6PKG0 1096 aaKnown RBP21.62■■□□□ 1.05
HDAC7-224ENST00000488927 TOM1L2Q6ZVM7 507 aa21.62■■□□□ 1.05
HDAC7-224ENST00000488927 THRAP3Q9Y2W1 955 aaKnown RBP21.61■■□□□ 1.05
HDAC7-224ENST00000488927 SPATA31A1Q5TZJ5 1347 aa21.6■■□□□ 1.05
HDAC7-224ENST00000488927 RALBP1Q15311 655 aa21.6■■□□□ 1.05
HDAC7-224ENST00000488927 HSP90AB2PQ58FF8 381 aa21.59■■□□□ 1.05
HDAC7-224ENST00000488927 CARD10Q9BWT7 1032 aa21.59■■□□□ 1.05
HDAC7-224ENST00000488927 MAP2P11137 1827 aaKnown RBP21.59■■□□□ 1.05
HDAC7-224ENST00000488927 PARD3Q8TEW0 1356 aa21.59■■□□□ 1.05
HDAC7-224ENST00000488927 CDK12Q9NYV4 1490 aaPredicted RBP21.58■■□□□ 1.05
HDAC7-224ENST00000488927 PEAK1Q9H792 1746 aa21.58■■□□□ 1.05
HDAC7-224ENST00000488927 TCP11L2Q8N4U5 519 aa21.58■■□□□ 1.05
HDAC7-224ENST00000488927 MTHFSP49914 203 aa21.57■■□□□ 1.04
HDAC7-224ENST00000488927 LTV1Q96GA3 475 aaPredicted RBP21.57■■□□□ 1.04
HDAC7-224ENST00000488927 RGPD5Q99666 1765 aa21.56■■□□□ 1.04
HDAC7-224ENST00000488927 BARGINQ6ZT62 677 aa21.56■■□□□ 1.04
HDAC7-224ENST00000488927 NLRP2Q9NX02 1062 aa21.56■■□□□ 1.04
HDAC7-224ENST00000488927 GLI3P10071 1580 aa21.56■■□□□ 1.04
HDAC7-224ENST00000488927 ONECUT3O60422 494 aaPredicted RBP21.55■■□□□ 1.04
HDAC7-224ENST00000488927 USP35Q9P2H5 1018 aa21.55■■□□□ 1.04
HDAC7-224ENST00000488927 FAM208AQ9UK61 1670 aaKnown RBP21.55■■□□□ 1.04
HDAC7-224ENST00000488927 PPP2R1AP30153 589 aa21.54■■□□□ 1.04
HDAC7-224ENST00000488927 CDCA7Q9BWT1 371 aaPredicted RBP21.54■■□□□ 1.04
HDAC7-224ENST00000488927 FAM98CQ17RN3 349 aaKnown RBP21.52■■□□□ 1.04
HDAC7-224ENST00000488927 CFAP53Q96M91 514 aa21.52■■□□□ 1.04
HDAC7-224ENST00000488927 EIF4A2Q14240 407 aaKnown RBP21.51■■□□□ 1.03
HDAC7-224ENST00000488927 PRKRIP1Q9H875 184 aaPredicted RBP21.5■■□□□ 1.03
HDAC7-224ENST00000488927 RGS12O14924 1447 aa21.49■■□□□ 1.03
HDAC7-224ENST00000488927 A0A0G2JS52 829 aa21.49■■□□□ 1.03
HDAC7-224ENST00000488927 MYT1Q01538 1121 aa21.49■■□□□ 1.03
HDAC7-224ENST00000488927 NBPF6Q5VWK0 638 aa21.49■■□□□ 1.03
HDAC7-224ENST00000488927 SEPT12Q8IYM1 358 aa21.49■■□□□ 1.03
HDAC7-224ENST00000488927 NBPF4Q96M43 638 aa21.49■■□□□ 1.03
HDAC7-224ENST00000488927 MYBBP1AQ9BQG0 1328 aaKnown RBP21.49■■□□□ 1.03
HDAC7-224ENST00000488927 DIAPH1O60610 1272 aaKnown RBP21.47■■□□□ 1.03
HDAC7-224ENST00000488927 ANP32CO43423 234 aa21.46■■□□□ 1.03
HDAC7-224ENST00000488927 IL2RBP14784 551 aa21.46■■□□□ 1.03
HDAC7-224ENST00000488927 IL13P35225 146 aa21.46■■□□□ 1.03
HDAC7-224ENST00000488927 THSD7AQ9UPZ6 1657 aa21.45■■□□□ 1.02
HDAC7-224ENST00000488927 EYA1Q99502 592 aa21.45■■□□□ 1.02
HDAC7-224ENST00000488927 DISP2A7MBM2 1401 aa21.45■■□□□ 1.02
HDAC7-224ENST00000488927 NCAPD2Q15021 1401 aa21.45■■□□□ 1.02
HDAC7-224ENST00000488927 IGSF1Q8N6C5 1336 aa21.44■■□□□ 1.02
HDAC7-224ENST00000488927 RAPGEF4Q8WZA2 1011 aa21.43■■□□□ 1.02
HDAC7-224ENST00000488927 NUDCQ9Y266 331 aa21.43■■□□□ 1.02
HDAC7-224ENST00000488927 COL3A1P02461 1466 aaPredicted RBP21.43■■□□□ 1.02
HDAC7-224ENST00000488927 DDB1Q16531 1140 aa21.42■■□□□ 1.02
HDAC7-224ENST00000488927 USHBP1Q8N6Y0 703 aa21.42■■□□□ 1.02
HDAC7-224ENST00000488927 PLEKHG2Q9H7P9 1386 aa21.41■■□□□ 1.02
HDAC7-224ENST00000488927 PDE3BQ13370 1112 aa21.41■■□□□ 1.02
HDAC7-224ENST00000488927 ILDR2Q71H61 639 aa21.41■■□□□ 1.02
HDAC7-224ENST00000488927 KRT27Q7Z3Y8 459 aa21.41■■□□□ 1.02
HDAC7-224ENST00000488927 PARP4Q9UKK3 1724 aaKnown RBP21.41■■□□□ 1.02
HDAC7-224ENST00000488927 EXOC5O00471 708 aa21.4■■□□□ 1.02
HDAC7-224ENST00000488927 TATP17735 454 aaPredicted RBP21.4■■□□□ 1.02
HDAC7-224ENST00000488927 WNK3Q9BYP7 1800 aa21.39■■□□□ 1.02
HDAC7-224ENST00000488927 RGPD2P0DJD1 1756 aa21.38■■□□□ 1.01
HDAC7-224ENST00000488927 OVOS2A0A0G2JMS6 1433 aa21.38■■□□□ 1.01
HDAC7-224ENST00000488927 TNS2Q63HR2 1409 aa21.38■■□□□ 1.01
HDAC7-224ENST00000488927 KDRP35968 1356 aa21.37■■□□□ 1.01
HDAC7-224ENST00000488927 U2SURPO15042 1029 aaKnown RBP21.37■■□□□ 1.01
HDAC7-224ENST00000488927 SULT6B1Q6IMI4 303 aa21.37■■□□□ 1.01
HDAC7-224ENST00000488927 MEGF6O75095 1541 aa21.36■■□□□ 1.01
HDAC7-224ENST00000488927 RGPD1P0DJD0 1748 aa21.36■■□□□ 1.01
HDAC7-224ENST00000488927 LRRC37A3O60309 1634 aa21.36■■□□□ 1.01
HDAC7-224ENST00000488927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms