RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 EMILIN1Q9Y6C2 1016 aa14.75□□□□□ -0.05
HDLBP-242ENST00000488013 CDK12Q9NYV4 1490 aaPredicted RBP14.75□□□□□ -0.05
HDLBP-242ENST00000488013 PNISRQ8TF01 805 aaKnown RBP14.74□□□□□ -0.05
HDLBP-242ENST00000488013 PRDM11Q9NQV5 511 aa14.74□□□□□ -0.05
HDLBP-242ENST00000488013 USP54Q70EL1 1684 aa14.74□□□□□ -0.05
HDLBP-242ENST00000488013 KIF20BQ96Q89 1820 aa14.73□□□□□ -0.05
HDLBP-242ENST00000488013 HOXC9P31274 260 aa14.73□□□□□ -0.05
HDLBP-242ENST00000488013 HSPA1LP34931 641 aa14.73□□□□□ -0.05
HDLBP-242ENST00000488013 CABLES1Q8TDN4 633 aa14.73□□□□□ -0.05
HDLBP-242ENST00000488013 ALS2Q96Q42 1657 aa14.73□□□□□ -0.05
HDLBP-242ENST00000488013 ZC3H6P61129 1189 aaKnown RBP14.72□□□□□ -0.05
HDLBP-242ENST00000488013 BLMP54132 1417 aaPredicted RBP14.72□□□□□ -0.05
HDLBP-242ENST00000488013 ANKRD26Q9UPS8 1709 aa14.72□□□□□ -0.05
HDLBP-242ENST00000488013 FBLN1P23142 703 aa14.71□□□□□ -0.05
HDLBP-242ENST00000488013 NFAT5O94916 1531 aa14.71□□□□□ -0.06
HDLBP-242ENST00000488013 ABCC6O95255 1503 aa14.71□□□□□ -0.06
HDLBP-242ENST00000488013 COL16A1Q07092 1604 aaPredicted RBP14.7□□□□□ -0.06
HDLBP-242ENST00000488013 PLEKHG5O94827 1062 aa14.7□□□□□ -0.06
HDLBP-242ENST00000488013 HSP90AB2PQ58FF8 381 aa14.7□□□□□ -0.06
HDLBP-242ENST00000488013 KIAA0232Q92628 1395 aa14.7□□□□□ -0.06
HDLBP-242ENST00000488013 NEFMP07197 916 aa14.69□□□□□ -0.06
HDLBP-242ENST00000488013 IL13P35225 146 aa14.69□□□□□ -0.06
HDLBP-242ENST00000488013 PHLPP1O60346 1717 aa14.69□□□□□ -0.06
HDLBP-242ENST00000488013 ZBTB7CA1YPR0 619 aa14.68□□□□□ -0.06
HDLBP-242ENST00000488013 FCHSD2O94868 740 aa14.68□□□□□ -0.06
HDLBP-242ENST00000488013 U2AF1L5P0DN76 240 aaPredicted RBP14.68□□□□□ -0.06
HDLBP-242ENST00000488013 U2AF1Q01081 240 aaKnown RBP eCLIP14.68□□□□□ -0.06
HDLBP-242ENST00000488013 CCDC184Q52MB2 194 aa14.68□□□□□ -0.06
HDLBP-242ENST00000488013 U2SURPO15042 1029 aaKnown RBP14.67□□□□□ -0.06
HDLBP-242ENST00000488013 EIF4A2Q14240 407 aaKnown RBP14.67□□□□□ -0.06
HDLBP-242ENST00000488013 FAM9BQ8IZU0 186 aa14.67□□□□□ -0.06
HDLBP-242ENST00000488013 COL22A1Q8NFW1 1626 aaPredicted RBP14.66□□□□□ -0.06
HDLBP-242ENST00000488013 NGEFQ8N5V2 710 aa14.66□□□□□ -0.06
HDLBP-242ENST00000488013 FAM83GA6ND36 823 aa14.65□□□□□ -0.06
HDLBP-242ENST00000488013 NUTM2BA6NNL0 878 aaPredicted RBP14.65□□□□□ -0.06
HDLBP-242ENST00000488013 NUTM2EB1AL46 878 aaPredicted RBP14.65□□□□□ -0.06
HDLBP-242ENST00000488013 CSB-PGBD3P0DP91 1061 aa14.65□□□□□ -0.06
HDLBP-242ENST00000488013 EVA1CP58658 441 aa14.65□□□□□ -0.06
HDLBP-242ENST00000488013 NUTM2AQ8IVF1 878 aaPredicted RBP14.65□□□□□ -0.06
HDLBP-242ENST00000488013 ANKRD24Q8TF21 1146 aa14.65□□□□□ -0.06
HDLBP-242ENST00000488013 ADAMTS8Q9UP79 889 aa14.65□□□□□ -0.06
HDLBP-242ENST00000488013 ERBB3P21860 1342 aa14.65□□□□□ -0.06
HDLBP-242ENST00000488013 COL3A1P02461 1466 aaPredicted RBP14.64□□□□□ -0.07
HDLBP-242ENST00000488013 ADAMTS2O95450 1211 aa14.64□□□□□ -0.07
HDLBP-242ENST00000488013 CHRNA2Q15822 529 aa14.64□□□□□ -0.07
HDLBP-242ENST00000488013 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
HDLBP-242ENST00000488013 AXIN2Q9Y2T1 843 aa14.63□□□□□ -0.07
HDLBP-242ENST00000488013 IGSF1Q8N6C5 1336 aa14.63□□□□□ -0.07
HDLBP-242ENST00000488013 PHRF1Q9P1Y6 1649 aaKnown RBP14.63□□□□□ -0.07
HDLBP-242ENST00000488013 PLEKHG2Q9H7P9 1386 aa14.62□□□□□ -0.07
HDLBP-242ENST00000488013 MEX3CQ5U5Q3 659 aaKnown RBP14.62□□□□□ -0.07
HDLBP-242ENST00000488013 RUNDC1Q96C34 613 aa14.62□□□□□ -0.07
HDLBP-242ENST00000488013 LTV1Q96GA3 475 aaPredicted RBP14.62□□□□□ -0.07
HDLBP-242ENST00000488013 EYA1Q99502 592 aa14.62□□□□□ -0.07
HDLBP-242ENST00000488013 WDR17Q8IZU2 1322 aa14.62□□□□□ -0.07
HDLBP-242ENST00000488013 NGLY1Q96IV0 654 aa14.61□□□□□ -0.07
HDLBP-242ENST00000488013 BTG4Q9NY30 223 aa14.61□□□□□ -0.07
HDLBP-242ENST00000488013 MAPK8IP3Q9UPT6 1336 aa14.61□□□□□ -0.07
HDLBP-242ENST00000488013 SULT6B1Q6IMI4 303 aa14.6□□□□□ -0.07
HDLBP-242ENST00000488013 FNBP4Q8N3X1 1017 aaPredicted RBP14.6□□□□□ -0.07
HDLBP-242ENST00000488013 CARD10Q9BWT7 1032 aa14.6□□□□□ -0.07
HDLBP-242ENST00000488013 NLRP2Q9NX02 1062 aa14.6□□□□□ -0.07
HDLBP-242ENST00000488013 SHPRHQ149N8 1683 aa14.6□□□□□ -0.07
HDLBP-242ENST00000488013 MARF1Q9Y4F3 1742 aaKnown RBP14.6□□□□□ -0.07
HDLBP-242ENST00000488013 KDRP35968 1356 aa14.6□□□□□ -0.07
HDLBP-242ENST00000488013 TOM1L2Q6ZVM7 507 aa14.59□□□□□ -0.07
HDLBP-242ENST00000488013 RSPH6AQ9H0K4 717 aa14.59□□□□□ -0.07
HDLBP-242ENST00000488013 NBPF6Q5VWK0 638 aa14.58□□□□□ -0.08
HDLBP-242ENST00000488013 UNC5CLQ8IV45 518 aa14.58□□□□□ -0.08
HDLBP-242ENST00000488013 NBPF4Q96M43 638 aa14.58□□□□□ -0.08
HDLBP-242ENST00000488013 CDCA7Q9BWT1 371 aaPredicted RBP14.58□□□□□ -0.08
HDLBP-242ENST00000488013 PRKAR2BP31323 418 aa14.57□□□□□ -0.08
HDLBP-242ENST00000488013 AMOTQ4VCS5 1084 aa14.57□□□□□ -0.08
HDLBP-242ENST00000488013 RAPGEF4Q8WZA2 1011 aa14.57□□□□□ -0.08
HDLBP-242ENST00000488013 C8orf37Q96NL8 207 aa14.57□□□□□ -0.08
HDLBP-242ENST00000488013 STRN4Q9NRL3 753 aa14.57□□□□□ -0.08
HDLBP-242ENST00000488013 THRAP3Q9Y2W1 955 aaKnown RBP14.57□□□□□ -0.08
HDLBP-242ENST00000488013 COL5A2P05997 1499 aaPredicted RBP14.57□□□□□ -0.08
HDLBP-242ENST00000488013 CRYBG1Q9Y4K1 1723 aa14.56□□□□□ -0.08
HDLBP-242ENST00000488013 HMOX1P09601 288 aa14.56□□□□□ -0.08
HDLBP-242ENST00000488013 GAS2L2Q8NHY3 880 aa14.56□□□□□ -0.08
HDLBP-242ENST00000488013 PLEKHF1Q96S99 279 aa14.56□□□□□ -0.08
HDLBP-242ENST00000488013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.56□□□□□ -0.08
HDLBP-242ENST00000488013 PEAK1Q9H792 1746 aa14.55□□□□□ -0.08
HDLBP-242ENST00000488013 MAP2P11137 1827 aaKnown RBP14.55□□□□□ -0.08
HDLBP-242ENST00000488013 LMOD3Q0VAK6 560 aa14.55□□□□□ -0.08
HDLBP-242ENST00000488013 PLEKHO1Q53GL0 409 aaPredicted RBP14.55□□□□□ -0.08
HDLBP-242ENST00000488013 SPINK5Q9NQ38 1064 aaPredicted RBP14.55□□□□□ -0.08
HDLBP-242ENST00000488013 CRB1P82279 1406 aa14.55□□□□□ -0.08
HDLBP-242ENST00000488013 NCAPD2Q15021 1401 aa14.55□□□□□ -0.08
HDLBP-242ENST00000488013 SLIT2O94813 1529 aa14.55□□□□□ -0.08
HDLBP-242ENST00000488013 CAMTA1Q9Y6Y1 1673 aa14.55□□□□□ -0.08
HDLBP-242ENST00000488013 TATP17735 454 aaPredicted RBP14.54□□□□□ -0.08
HDLBP-242ENST00000488013 HNRNPUQ00839 825 aaKnown RBP eCLIP14.54□□□□□ -0.08
HDLBP-242ENST00000488013 VPS72Q15906 364 aa14.54□□□□□ -0.08
HDLBP-242ENST00000488013 LARP1Q6PKG0 1096 aaKnown RBP14.54□□□□□ -0.08
HDLBP-242ENST00000488013 TCP11L2Q8N4U5 519 aa14.54□□□□□ -0.08
HDLBP-242ENST00000488013 USP21Q9UK80 565 aa14.54□□□□□ -0.08
HDLBP-242ENST00000488013 COL14A1Q05707 1796 aaKnown RBP14.54□□□□□ -0.08
HDLBP-242ENST00000488013 CAPN15O75808 1086 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms