RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 GBP2P32456 591 aaPredicted RBP18.17■□□□□ 0.5
PKD1-220ENST00000487932 PSMD1Q99460 953 aa18.17■□□□□ 0.5
PKD1-220ENST00000487932 MTHFSP49914 203 aa18.16■□□□□ 0.5
PKD1-220ENST00000487932 TSPY26PQ9H489 355 aa18.16■□□□□ 0.5
PKD1-220ENST00000487932 PIP4K2AP48426 406 aaPredicted RBP18.16■□□□□ 0.5
PKD1-220ENST00000487932 PRKAR2BP31323 418 aa18.16■□□□□ 0.5
PKD1-220ENST00000487932 SLC4A2P04920 1241 aa18.16■□□□□ 0.5
PKD1-220ENST00000487932 HDGFL1Q5TGJ6 251 aa18.16■□□□□ 0.5
PKD1-220ENST00000487932 LRP2BPQ9P2M1 347 aa18.15■□□□□ 0.5
PKD1-220ENST00000487932 GNAI2P04899 355 aa18.15■□□□□ 0.5
PKD1-220ENST00000487932 PLCD3Q8N3E9 789 aa18.15■□□□□ 0.5
PKD1-220ENST00000487932 TMOD2Q9NZR1 351 aa18.15■□□□□ 0.5
PKD1-220ENST00000487932 EZRP15311 586 aaKnown RBP18.15■□□□□ 0.5
PKD1-220ENST00000487932 CWC15Q9P013 229 aaKnown RBP18.14■□□□□ 0.5
PKD1-220ENST00000487932 BMP2KQ9NSY1 1161 aaPredicted RBP18.14■□□□□ 0.49
PKD1-220ENST00000487932 NOL7Q9UMY1 257 aaKnown RBP18.14■□□□□ 0.49
PKD1-220ENST00000487932 SPG7Q9UQ90 795 aa18.14■□□□□ 0.49
PKD1-220ENST00000487932 TRIM21P19474 475 aaKnown RBP18.14■□□□□ 0.49
PKD1-220ENST00000487932 UBAC1Q9BSL1 405 aa18.14■□□□□ 0.49
PKD1-220ENST00000487932 LUC7LQ9NQ29 371 aaKnown RBP18.14■□□□□ 0.49
PKD1-220ENST00000487932 CA8P35219 290 aa18.13■□□□□ 0.49
PKD1-220ENST00000487932 NFKBIBQ15653 356 aa18.13■□□□□ 0.49
PKD1-220ENST00000487932 TAF3Q5VWG9 929 aa18.13■□□□□ 0.49
PKD1-220ENST00000487932 CCDC112Q8NEF3 446 aa18.13■□□□□ 0.49
PKD1-220ENST00000487932 LIG1P18858 919 aa18.13■□□□□ 0.49
PKD1-220ENST00000487932 TWISTNBQ3B726 338 aaPredicted RBP18.13■□□□□ 0.49
PKD1-220ENST00000487932 LETM1O95202 739 aaPredicted RBP18.13■□□□□ 0.49
PKD1-220ENST00000487932 ZNF530Q6P9A1 599 aaPredicted RBP18.13■□□□□ 0.49
PKD1-220ENST00000487932 LEKR1Q6ZMV7 388 aa18.12■□□□□ 0.49
PKD1-220ENST00000487932 ABCF2Q9UG63 623 aa18.12■□□□□ 0.49
PKD1-220ENST00000487932 ZBED9Q6R2W3 1325 aa18.12■□□□□ 0.49
PKD1-220ENST00000487932 LRRFIP2Q9Y608 721 aaKnown RBP18.12■□□□□ 0.49
PKD1-220ENST00000487932 CYP46A1Q9Y6A2 500 aa18.12■□□□□ 0.49
PKD1-220ENST00000487932 CCDC88BA6NC98 1476 aa18.12■□□□□ 0.49
PKD1-220ENST00000487932 JMYQ8N9B5 988 aa18.12■□□□□ 0.49
PKD1-220ENST00000487932 CRACR2BQ8N4Y2 399 aaPredicted RBP18.12■□□□□ 0.49
PKD1-220ENST00000487932 TTC16Q8NEE8 873 aa18.12■□□□□ 0.49
PKD1-220ENST00000487932 RAPGEF2Q9Y4G8 1499 aa18.12■□□□□ 0.49
PKD1-220ENST00000487932 NOB1Q9ULX3 412 aaKnown RBP18.11■□□□□ 0.49
PKD1-220ENST00000487932 ANAPC15P60006 121 aa18.11■□□□□ 0.49
PKD1-220ENST00000487932 EXOSC9Q06265 439 aaKnown RBP18.11■□□□□ 0.49
PKD1-220ENST00000487932 DHX8Q14562 1220 aaKnown RBP18.11■□□□□ 0.49
PKD1-220ENST00000487932 TRMT1LQ7Z2T5 733 aaKnown RBP18.11■□□□□ 0.49
PKD1-220ENST00000487932 AACSQ86V21 672 aa18.11■□□□□ 0.49
PKD1-220ENST00000487932 CCP110O43303 1012 aa18.11■□□□□ 0.49
PKD1-220ENST00000487932 SULT6B1Q6IMI4 303 aa18.11■□□□□ 0.49
PKD1-220ENST00000487932 IDH1O75874 414 aaKnown RBP18.1■□□□□ 0.49
PKD1-220ENST00000487932 HMGN5P82970 282 aaKnown RBP18.1■□□□□ 0.49
PKD1-220ENST00000487932 PRAM1Q96QH2 718 aa18.1■□□□□ 0.49
PKD1-220ENST00000487932 PRDM11Q9NQV5 511 aa18.1■□□□□ 0.49
PKD1-220ENST00000487932 DACH1Q9UI36 760 aa18.1■□□□□ 0.49
PKD1-220ENST00000487932 SMARCA2P51531 1590 aa18.1■□□□□ 0.49
PKD1-220ENST00000487932 WDHD1O75717 1129 aaPredicted RBP18.1■□□□□ 0.49
PKD1-220ENST00000487932 GRM1Q13255 1194 aa18.1■□□□□ 0.49
PKD1-220ENST00000487932 TNMDQ9H2S6 317 aa18.1■□□□□ 0.49
PKD1-220ENST00000487932 PDCP20941 246 aa18.1■□□□□ 0.49
PKD1-220ENST00000487932 ZSCAN25Q6NSZ9 544 aa18.1■□□□□ 0.49
PKD1-220ENST00000487932 IGHMBP2P38935 993 aaKnown RBP18.09■□□□□ 0.49
PKD1-220ENST00000487932 PRDM2Q13029 1718 aa18.09■□□□□ 0.49
PKD1-220ENST00000487932 UBA5Q9GZZ9 404 aa18.09■□□□□ 0.49
PKD1-220ENST00000487932 POLR3DP05423 398 aaPredicted RBP18.09■□□□□ 0.49
PKD1-220ENST00000487932 TSR2Q969E8 191 aaKnown RBP18.09■□□□□ 0.49
PKD1-220ENST00000487932 KIF7Q2M1P5 1343 aa18.08■□□□□ 0.49
PKD1-220ENST00000487932 BTBD11A6QL63 1104 aa18.08■□□□□ 0.48
PKD1-220ENST00000487932 PPP4R3AQ6IN85 833 aa18.07■□□□□ 0.48
PKD1-220ENST00000487932 ANKIB1Q9P2G1 1089 aa18.07■□□□□ 0.48
PKD1-220ENST00000487932 CEP57L1Q8IYX8 460 aa18.07■□□□□ 0.48
PKD1-220ENST00000487932 KIAA0754O94854 1291 aa18.07■□□□□ 0.48
PKD1-220ENST00000487932 TNIP1Q15025 636 aa18.07■□□□□ 0.48
PKD1-220ENST00000487932 LRRCC1Q9C099 1032 aa18.07■□□□□ 0.48
PKD1-220ENST00000487932 TCP11L2Q8N4U5 519 aa18.06■□□□□ 0.48
PKD1-220ENST00000487932 ZC3H6P61129 1189 aaKnown RBP18.06■□□□□ 0.48
PKD1-220ENST00000487932 EIF5P55010 431 aaKnown RBP18.06■□□□□ 0.48
PKD1-220ENST00000487932 KIAA1328Q86T90 577 aa18.06■□□□□ 0.48
PKD1-220ENST00000487932 ZPR1O75312 459 aa18.06■□□□□ 0.48
PKD1-220ENST00000487932 POTEJP0CG39 1038 aa18.06■□□□□ 0.48
PKD1-220ENST00000487932 ADAMTS8Q9UP79 889 aa18.06■□□□□ 0.48
PKD1-220ENST00000487932 RBM10P98175 930 aaKnown RBP18.05■□□□□ 0.48
PKD1-220ENST00000487932 CWC27Q6UX04 472 aaKnown RBP18.05■□□□□ 0.48
PKD1-220ENST00000487932 BCAR3O75815 825 aa18.05■□□□□ 0.48
PKD1-220ENST00000487932 DRC1Q96MC2 740 aa18.05■□□□□ 0.48
PKD1-220ENST00000487932 MINDY4BA8MYZ0 360 aa18.05■□□□□ 0.48
PKD1-220ENST00000487932 COMMD10Q9Y6G5 202 aa18.05■□□□□ 0.48
PKD1-220ENST00000487932 TRAK2O60296 914 aa18.04■□□□□ 0.48
PKD1-220ENST00000487932 JAKMIP3Q5VZ66 844 aa18.04■□□□□ 0.48
PKD1-220ENST00000487932 LARP1BQ659C4 914 aaKnown RBP18.04■□□□□ 0.48
PKD1-220ENST00000487932 CCDC113Q9H0I3 377 aa18.04■□□□□ 0.48
PKD1-220ENST00000487932 SEC63Q9UGP8 760 aaKnown RBP18.04■□□□□ 0.48
PKD1-220ENST00000487932 PDZRN3Q9UPQ7 1066 aa18.04■□□□□ 0.48
PKD1-220ENST00000487932 CNTLNQ9NXG0 1405 aa18.04■□□□□ 0.48
PKD1-220ENST00000487932 ADAMTS2O95450 1211 aa18.04■□□□□ 0.48
PKD1-220ENST00000487932 AIDAQ96BJ3 306 aa18.04■□□□□ 0.48
PKD1-220ENST00000487932 SRCIN1Q9C0H9 1055 aa18.04■□□□□ 0.48
PKD1-220ENST00000487932 GOLGA6L7A0A1B0GV03 622 aa18.03■□□□□ 0.48
PKD1-220ENST00000487932 CDK19Q9BWU1 502 aa18.03■□□□□ 0.48
PKD1-220ENST00000487932 CCDC96Q2M329 555 aa18.03■□□□□ 0.48
PKD1-220ENST00000487932 TXLNBQ8N3L3 684 aa18.03■□□□□ 0.48
PKD1-220ENST00000487932 TAF4BQ92750 862 aa18.03■□□□□ 0.48
PKD1-220ENST00000487932 MKNK2Q9HBH9 465 aa18.03■□□□□ 0.48
PKD1-220ENST00000487932 CEP126Q9P2H0 1117 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms