RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 DDX19BQ9UMR2 479 aa21.65■■□□□ 1.06
FDPS-212ENST00000487002 USP6P35125 1406 aa21.64■■□□□ 1.06
FDPS-212ENST00000487002 NCKAP5LQ9HCH0 1330 aa21.64■■□□□ 1.06
FDPS-212ENST00000487002 LMOD3Q0VAK6 560 aa21.64■■□□□ 1.05
FDPS-212ENST00000487002 IPO8O15397 1037 aaKnown RBP21.63■■□□□ 1.05
FDPS-212ENST00000487002 ZRANB1Q9UGI0 708 aa21.63■■□□□ 1.05
FDPS-212ENST00000487002 XRN1Q8IZH2 1706 aaKnown RBP21.63■■□□□ 1.05
FDPS-212ENST00000487002 TTC21BQ7Z4L5 1316 aa21.62■■□□□ 1.05
FDPS-212ENST00000487002 IFT57Q9NWB7 429 aa21.62■■□□□ 1.05
FDPS-212ENST00000487002 HMOX1P09601 288 aa21.62■■□□□ 1.05
FDPS-212ENST00000487002 PHACTR3Q96KR7 559 aa21.62■■□□□ 1.05
FDPS-212ENST00000487002 GNAI1P63096 354 aa21.61■■□□□ 1.05
FDPS-212ENST00000487002 TBX22Q9Y458 520 aa21.61■■□□□ 1.05
FDPS-212ENST00000487002 RGPD1P0DJD0 1748 aa21.61■■□□□ 1.05
FDPS-212ENST00000487002 ACEP12821 1306 aa21.6■■□□□ 1.05
FDPS-212ENST00000487002 SSH2Q76I76 1423 aa21.6■■□□□ 1.05
FDPS-212ENST00000487002 NOB1Q9ULX3 412 aaKnown RBP21.6■■□□□ 1.05
FDPS-212ENST00000487002 USP31Q70CQ4 1352 aa21.6■■□□□ 1.05
FDPS-212ENST00000487002 HDAC1Q13547 482 aaPredicted RBP21.59■■□□□ 1.05
FDPS-212ENST00000487002 FMN2Q9NZ56 1722 aa21.58■■□□□ 1.05
FDPS-212ENST00000487002 RRS1Q15050 365 aaKnown RBP21.58■■□□□ 1.05
FDPS-212ENST00000487002 ZNF853P0CG23 659 aa21.58■■□□□ 1.04
FDPS-212ENST00000487002 PEAK1Q9H792 1746 aa21.57■■□□□ 1.04
FDPS-212ENST00000487002 CEBPAP49715 358 aaPredicted RBP21.57■■□□□ 1.04
FDPS-212ENST00000487002 ITPRIPQ8IWB1 547 aa21.56■■□□□ 1.04
FDPS-212ENST00000487002 PDZRN3Q9UPQ7 1066 aa21.56■■□□□ 1.04
FDPS-212ENST00000487002 TTC21AQ8NDW8 1320 aa21.56■■□□□ 1.04
FDPS-212ENST00000487002 THEMISQ8N1K5 641 aaPredicted RBP21.55■■□□□ 1.04
FDPS-212ENST00000487002 PIK3R4Q99570 1358 aa21.55■■□□□ 1.04
FDPS-212ENST00000487002 ARHGAP45Q92619 1136 aa21.55■■□□□ 1.04
FDPS-212ENST00000487002 AMOTL2Q9Y2J4 779 aa21.55■■□□□ 1.04
FDPS-212ENST00000487002 SLC26A8Q96RN1 970 aa21.54■■□□□ 1.04
FDPS-212ENST00000487002 NBR1Q14596 966 aa21.53■■□□□ 1.04
FDPS-212ENST00000487002 TMEM57Q8N5G2 664 aa21.53■■□□□ 1.04
FDPS-212ENST00000487002 CFAP44Q96MT7 982 aa21.53■■□□□ 1.04
FDPS-212ENST00000487002 USP54Q70EL1 1684 aa21.53■■□□□ 1.04
FDPS-212ENST00000487002 CHMP4BQ9H444 224 aaKnown RBP21.53■■□□□ 1.04
FDPS-212ENST00000487002 ZBTB40Q9NUA8 1239 aa21.53■■□□□ 1.04
FDPS-212ENST00000487002 ANKARQ7Z5J8 1434 aa21.53■■□□□ 1.04
FDPS-212ENST00000487002 VAMP4O75379 141 aa21.52■■□□□ 1.04
FDPS-212ENST00000487002 RTL5Q5HYW3 569 aaPredicted RBP21.52■■□□□ 1.04
FDPS-212ENST00000487002 RGPD8O14715 1765 aaPredicted RBP21.52■■□□□ 1.04
FDPS-212ENST00000487002 EIF4A2Q14240 407 aaKnown RBP21.51■■□□□ 1.03
FDPS-212ENST00000487002 CEP170BQ9Y4F5 1589 aaPredicted RBP21.51■■□□□ 1.03
FDPS-212ENST00000487002 LAS1LQ9Y4W2 734 aaKnown RBP21.51■■□□□ 1.03
FDPS-212ENST00000487002 MBIPQ9NS73 344 aa21.51■■□□□ 1.03
FDPS-212ENST00000487002 USP35Q9P2H5 1018 aa21.51■■□□□ 1.03
FDPS-212ENST00000487002 MRPL50Q8N5N7 158 aaKnown RBP21.5■■□□□ 1.03
FDPS-212ENST00000487002 DAXXQ9UER7 740 aaPredicted RBP21.5■■□□□ 1.03
FDPS-212ENST00000487002 SMC5Q8IY18 1101 aa21.5■■□□□ 1.03
FDPS-212ENST00000487002 THUMPD2Q9BTF0 503 aaKnown RBP21.5■■□□□ 1.03
FDPS-212ENST00000487002 ARHGEF10O15013 1369 aa21.49■■□□□ 1.03
FDPS-212ENST00000487002 PIK3C2AO00443 1686 aa21.49■■□□□ 1.03
FDPS-212ENST00000487002 USP19O94966 1318 aa21.49■■□□□ 1.03
FDPS-212ENST00000487002 HAP1P54257 671 aaPredicted RBP21.46■■□□□ 1.03
FDPS-212ENST00000487002 TWISTNBQ3B726 338 aaPredicted RBP21.46■■□□□ 1.03
FDPS-212ENST00000487002 ZNF142P52746 1687 aaPredicted RBP21.46■■□□□ 1.03
FDPS-212ENST00000487002 SBNO1A3KN83 1393 aa21.46■■□□□ 1.03
FDPS-212ENST00000487002 ABCC4O15439 1325 aa21.45■■□□□ 1.02
FDPS-212ENST00000487002 SULT6B1Q6IMI4 303 aa21.45■■□□□ 1.02
FDPS-212ENST00000487002 FLT4P35916 1363 aa21.45■■□□□ 1.02
FDPS-212ENST00000487002 TSPYL6Q8N831 410 aa21.45■■□□□ 1.02
FDPS-212ENST00000487002 NUTM2FA1L443 756 aa21.44■■□□□ 1.02
FDPS-212ENST00000487002 UPF2Q9HAU5 1272 aaKnown RBP21.44■■□□□ 1.02
FDPS-212ENST00000487002 KIF24Q5T7B8 1368 aa21.44■■□□□ 1.02
FDPS-212ENST00000487002 MARF1Q9Y4F3 1742 aaKnown RBP21.44■■□□□ 1.02
FDPS-212ENST00000487002 AEBP1Q8IUX7 1158 aa21.43■■□□□ 1.02
FDPS-212ENST00000487002 KIAA0232Q92628 1395 aa21.42■■□□□ 1.02
FDPS-212ENST00000487002 API5Q9BZZ5 524 aaKnown RBP21.42■■□□□ 1.02
FDPS-212ENST00000487002 KDRP35968 1356 aa21.42■■□□□ 1.02
FDPS-212ENST00000487002 HSP90AB2PQ58FF8 381 aa21.41■■□□□ 1.02
FDPS-212ENST00000487002 CHD2O14647 1828 aaKnown RBP21.41■■□□□ 1.02
FDPS-212ENST00000487002 FAM83GA6ND36 823 aa21.41■■□□□ 1.02
FDPS-212ENST00000487002 SEC24BO95487 1268 aa21.41■■□□□ 1.02
FDPS-212ENST00000487002 C8orf58Q8NAV2 365 aa21.41■■□□□ 1.02
FDPS-212ENST00000487002 NGDNQ8NEJ9 315 aaKnown RBP21.41■■□□□ 1.02
FDPS-212ENST00000487002 MAP3K19Q56UN5 1328 aa21.41■■□□□ 1.02
FDPS-212ENST00000487002 ZBTB7BO15156 539 aaPredicted RBP21.4■■□□□ 1.02
FDPS-212ENST00000487002 NUCB1Q02818 461 aa21.39■■□□□ 1.01
FDPS-212ENST00000487002 CHL1O00533 1208 aa21.38■■□□□ 1.01
FDPS-212ENST00000487002 DEKP35659 375 aaKnown RBP21.38■■□□□ 1.01
FDPS-212ENST00000487002 TBC1D32Q96NH3 1257 aa21.38■■□□□ 1.01
FDPS-212ENST00000487002 BECN1Q14457 450 aa21.37■■□□□ 1.01
FDPS-212ENST00000487002 CRB1P82279 1406 aa21.37■■□□□ 1.01
FDPS-212ENST00000487002 LRRC37A3O60309 1634 aa21.37■■□□□ 1.01
FDPS-212ENST00000487002 DCTN1Q14203 1278 aa21.36■■□□□ 1.01
FDPS-212ENST00000487002 GCC1Q96CN9 775 aa21.36■■□□□ 1.01
FDPS-212ENST00000487002 IGSF1Q8N6C5 1336 aa21.36■■□□□ 1.01
FDPS-212ENST00000487002 ELL2O00472 640 aaPredicted RBP21.35■■□□□ 1.01
FDPS-212ENST00000487002 KCNA6P17658 529 aa21.35■■□□□ 1.01
FDPS-212ENST00000487002 SLC4A3P48751 1232 aa21.35■■□□□ 1.01
FDPS-212ENST00000487002 PLPPR3Q6T4P5 718 aa21.34■■□□□ 1.01
FDPS-212ENST00000487002 CHD1LQ86WJ1 897 aa21.33■■□□□ 1
FDPS-212ENST00000487002 AMPHP49418 695 aa21.31■■□□□ 1
FDPS-212ENST00000487002 RGS12O14924 1447 aa21.31■■□□□ 1
FDPS-212ENST00000487002 PTPRCP08575 1304 aa21.31■■□□□ 1
FDPS-212ENST00000487002 INTS3Q68E01 1043 aaKnown RBP21.31■■□□□ 1
FDPS-212ENST00000487002 GAS2L2Q8NHY3 880 aa21.31■■□□□ 1
FDPS-212ENST00000487002 RTL1A6NKG5 1358 aa21.3■■□□□ 1
FDPS-212ENST00000487002 ADAMTSL3P82987 1691 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 230.4 ms