RNA–Protein interactions for RNA: ENST00000483831.1

ABCB1-206, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 642 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-206ENST00000483831 ITPKCQ96DU7 683 aa10.13□□□□□ -0.79
ABCB1-206ENST00000483831 PCDHGC3Q9UN70 934 aa10.13□□□□□ -0.79
ABCB1-206ENST00000483831 POLA1P09884 1462 aaPredicted RBP10.12□□□□□ -0.79
ABCB1-206ENST00000483831 IRS1P35568 1242 aa10.12□□□□□ -0.79
ABCB1-206ENST00000483831 NR5A1Q13285 461 aa10.12□□□□□ -0.79
ABCB1-206ENST00000483831 ZNF385CQ66K41 422 aaPredicted RBP10.12□□□□□ -0.79
ABCB1-206ENST00000483831 KANK3Q6NY19 840 aa10.12□□□□□ -0.79
ABCB1-206ENST00000483831 LINC00528Q8N1L1 170 aa10.12□□□□□ -0.79
ABCB1-206ENST00000483831 SOS2Q07890 1332 aaPredicted RBP10.11□□□□□ -0.79
ABCB1-206ENST00000483831 IRF6O14896 467 aa10.11□□□□□ -0.79
ABCB1-206ENST00000483831 ARID5BQ14865 1188 aa10.11□□□□□ -0.79
ABCB1-206ENST00000483831 XP32Q5T750 250 aa10.11□□□□□ -0.79
ABCB1-206ENST00000483831 HOMEZQ8IX15 550 aa10.11□□□□□ -0.79
ABCB1-206ENST00000483831 COL25A1Q9BXS0 654 aaPredicted RBP10.11□□□□□ -0.79
ABCB1-206ENST00000483831 GPCPD1Q9NPB8 672 aa10.1□□□□□ -0.79
ABCB1-206ENST00000483831 FAM217BQ9NTX9 383 aaPredicted RBP10.1□□□□□ -0.79
ABCB1-206ENST00000483831 DNMT3LQ9UJW3 386 aa10.1□□□□□ -0.79
ABCB1-206ENST00000483831 WDR97A6NE52 1622 aa10.09□□□□□ -0.79
ABCB1-206ENST00000483831 SPTLC1O15269 473 aa10.09□□□□□ -0.79
ABCB1-206ENST00000483831 MEIOBQ8N635 442 aa10.09□□□□□ -0.79
ABCB1-206ENST00000483831 AK7Q96M32 723 aa10.09□□□□□ -0.79
ABCB1-206ENST00000483831 SNAPC4Q5SXM2 1469 aa10.09□□□□□ -0.79
ABCB1-206ENST00000483831 SYNJ1O43426 1573 aa10.09□□□□□ -0.79
ABCB1-206ENST00000483831 CLCN1P35523 988 aa10.08□□□□□ -0.8
ABCB1-206ENST00000483831 MARSP56192 900 aaKnown RBP10.08□□□□□ -0.8
ABCB1-206ENST00000483831 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.08□□□□□ -0.8
ABCB1-206ENST00000483831 DESI1Q6ICB0 168 aa10.08□□□□□ -0.8
ABCB1-206ENST00000483831 NANOS1Q8WY41 292 aaKnown RBP10.08□□□□□ -0.8
ABCB1-206ENST00000483831 RAD54L2Q9Y4B4 1467 aa10.08□□□□□ -0.8
ABCB1-206ENST00000483831 NR3C2P08235 984 aa10.07□□□□□ -0.8
ABCB1-206ENST00000483831 PRR7Q8TB68 274 aa10.07□□□□□ -0.8
ABCB1-206ENST00000483831 MINK1Q8N4C8 1332 aaPredicted RBP10.06□□□□□ -0.8
ABCB1-206ENST00000483831 MAGI1Q96QZ7 1491 aaPredicted RBP10.05□□□□□ -0.8
ABCB1-206ENST00000483831 ARHGEF15O94989 841 aa10.05□□□□□ -0.8
ABCB1-206ENST00000483831 SLURP2P0DP57 97 aa10.05□□□□□ -0.8
ABCB1-206ENST00000483831 SCARF2Q96GP6 870 aaPredicted RBP10.05□□□□□ -0.8
ABCB1-206ENST00000483831 GAPVD1Q14C86 1478 aa10.04□□□□□ -0.8
ABCB1-206ENST00000483831 TDRD9Q8NDG6 1382 aaKnown RBP10.04□□□□□ -0.8
ABCB1-206ENST00000483831 SPDYE5A6NIY4 337 aa10.04□□□□□ -0.8
ABCB1-206ENST00000483831 CTHP32929 405 aa10.04□□□□□ -0.8
ABCB1-206ENST00000483831 PTSQ03393 145 aa10.04□□□□□ -0.8
ABCB1-206ENST00000483831 FOXJ1Q92949 421 aa10.04□□□□□ -0.8
ABCB1-206ENST00000483831 TSEN34Q9BSV6 310 aaKnown RBP10.04□□□□□ -0.8
ABCB1-206ENST00000483831 GPBP1L1Q9HC44 474 aaPredicted RBP10.04□□□□□ -0.8
ABCB1-206ENST00000483831 GRM5P41594 1212 aa10.03□□□□□ -0.8
ABCB1-206ENST00000483831 RNFT1Q5M7Z0 435 aa10.03□□□□□ -0.8
ABCB1-206ENST00000483831 KRI1Q8N9T8 703 aaKnown RBP10.03□□□□□ -0.8
ABCB1-206ENST00000483831 WHAMMQ8TF30 809 aa10.03□□□□□ -0.8
ABCB1-206ENST00000483831 KIF13AQ9H1H9 1805 aa10.03□□□□□ -0.8
ABCB1-206ENST00000483831 TTLL8A6PVC2 850 aa10.02□□□□□ -0.81
ABCB1-206ENST00000483831 SYNJ2O15056 1496 aa10.02□□□□□ -0.81
ABCB1-206ENST00000483831 SOGA1O94964 1423 aa10.01□□□□□ -0.81
ABCB1-206ENST00000483831 MTMR2Q13614 643 aa10.01□□□□□ -0.81
ABCB1-206ENST00000483831 SUPT5HO00267 1087 aaKnown RBP10□□□□□ -0.81
ABCB1-206ENST00000483831 ERCC6L2Q5T890 1561 aa10□□□□□ -0.81
ABCB1-206ENST00000483831 PBRM1Q86U86 1689 aa9.99□□□□□ -0.81
ABCB1-206ENST00000483831 FGD5Q6ZNL6 1462 aa9.99□□□□□ -0.81
ABCB1-206ENST00000483831 ADAM23O75077 832 aa9.99□□□□□ -0.81
ABCB1-206ENST00000483831 NDUFV2P19404 249 aa9.99□□□□□ -0.81
ABCB1-206ENST00000483831 AGERQ15109 404 aa9.99□□□□□ -0.81
ABCB1-206ENST00000483831 LYPD8Q6UX82 237 aa9.99□□□□□ -0.81
ABCB1-206ENST00000483831 CCDC155Q8N6L0 562 aa9.99□□□□□ -0.81
ABCB1-206ENST00000483831 SPIRE2Q8WWL2 714 aa9.99□□□□□ -0.81
ABCB1-206ENST00000483831 CCDC102AQ96A19 550 aa9.99□□□□□ -0.81
ABCB1-206ENST00000483831 KDM4CQ9H3R0 1056 aa9.99□□□□□ -0.81
ABCB1-206ENST00000483831 GRIN2BQ13224 1484 aa9.98□□□□□ -0.81
ABCB1-206ENST00000483831 TRIM66O15016 1216 aa9.98□□□□□ -0.81
ABCB1-206ENST00000483831 PDE4DQ08499 809 aa9.97□□□□□ -0.81
ABCB1-206ENST00000483831 BPHLQ86WA6 291 aaPredicted RBP9.97□□□□□ -0.81
ABCB1-206ENST00000483831 CHMP7Q8WUX9 453 aaPredicted RBP9.97□□□□□ -0.81
ABCB1-206ENST00000483831 MOXD2PA6NHM9 499 aa9.96□□□□□ -0.82
ABCB1-206ENST00000483831 MSTNO14793 375 aa9.96□□□□□ -0.82
ABCB1-206ENST00000483831 IL27Q8NEV9 243 aa9.96□□□□□ -0.82
ABCB1-206ENST00000483831 FIGNL2A6NMB9 653 aa9.95□□□□□ -0.82
ABCB1-206ENST00000483831 C4orf48Q5BLP8 95 aa9.95□□□□□ -0.82
ABCB1-206ENST00000483831 SV2AQ7L0J3 742 aa9.95□□□□□ -0.82
ABCB1-206ENST00000483831 EMILIN1Q9Y6C2 1016 aa9.95□□□□□ -0.82
ABCB1-206ENST00000483831 CUX1P39880 1505 aa9.95□□□□□ -0.82
ABCB1-206ENST00000483831 SLC35F4A4IF30 521 aa9.94□□□□□ -0.82
ABCB1-206ENST00000483831 FSHRP23945 695 aa9.94□□□□□ -0.82
ABCB1-206ENST00000483831 VWA5B2Q8N398 1253 aa9.94□□□□□ -0.82
ABCB1-206ENST00000483831 SHROOM2Q13796 1616 aa9.93□□□□□ -0.82
ABCB1-206ENST00000483831 ABCA5Q8WWZ7 1642 aa9.93□□□□□ -0.82
ABCB1-206ENST00000483831 CDC14CA4D256 554 aa9.93□□□□□ -0.82
ABCB1-206ENST00000483831 F12P00748 615 aaPredicted RBP9.93□□□□□ -0.82
ABCB1-206ENST00000483831 ITGA6P23229 1130 aa9.93□□□□□ -0.82
ABCB1-206ENST00000483831 MAP3K10Q02779 954 aa9.93□□□□□ -0.82
ABCB1-206ENST00000483831 MAP10Q9P2G4 905 aa9.93□□□□□ -0.82
ABCB1-206ENST00000483831 CEP170Q5SW79 1584 aa9.92□□□□□ -0.82
ABCB1-206ENST00000483831 SSTR3P32745 418 aaPredicted RBP9.92□□□□□ -0.82
ABCB1-206ENST00000483831 KRTAP4-8Q9BYQ9 185 aa9.92□□□□□ -0.82
ABCB1-206ENST00000483831 MAP4K5Q9Y4K4 846 aa9.92□□□□□ -0.82
ABCB1-206ENST00000483831 PLA2G4EQ3MJ16 856 aa9.91□□□□□ -0.82
ABCB1-206ENST00000483831 ADAMTS2O95450 1211 aa9.9□□□□□ -0.82
ABCB1-206ENST00000483831 VASH1Q7L8A9 365 aaPredicted RBP9.9□□□□□ -0.82
ABCB1-206ENST00000483831 CCDC116Q8IYX3 515 aa9.9□□□□□ -0.82
ABCB1-206ENST00000483831 SPOCK3Q9BQ16 436 aa9.9□□□□□ -0.82
ABCB1-206ENST00000483831 C1QTNF2Q9BXJ5 285 aa9.9□□□□□ -0.82
ABCB1-206ENST00000483831 NUP160Q12769 1436 aa9.9□□□□□ -0.83
ABCB1-206ENST00000483831 SPINT1O43278 529 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms