RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 UBTFL1P0CB47 393 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP2-216ENST00000483412 FSD1Q9BTV5 496 aa11.39□□□□□ -0.59
CDK5RAP2-216ENST00000483412 FILIP1LQ4L180 1135 aa11.38□□□□□ -0.59
CDK5RAP2-216ENST00000483412 BCAR3O75815 825 aa11.38□□□□□ -0.59
CDK5RAP2-216ENST00000483412 SERPINC1P01008 464 aa11.38□□□□□ -0.59
CDK5RAP2-216ENST00000483412 MYO6Q9UM54 1294 aa11.38□□□□□ -0.59
CDK5RAP2-216ENST00000483412 NEUROD6Q96NK8 337 aa11.38□□□□□ -0.59
CDK5RAP2-216ENST00000483412 BRMS1Q9HCU9 246 aa11.38□□□□□ -0.59
CDK5RAP2-216ENST00000483412 PDCL2Q8N4E4 241 aa11.38□□□□□ -0.59
CDK5RAP2-216ENST00000483412 ZNF396Q96N95 335 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP2-216ENST00000483412 FAM177A1Q8N128 213 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP2-216ENST00000483412 SMG6Q86US8 1419 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP2-216ENST00000483412 ODF2Q5BJF6 829 aa11.37□□□□□ -0.59
CDK5RAP2-216ENST00000483412 PROSER2Q86WR7 435 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP2-216ENST00000483412 DHX37Q8IY37 1157 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP2-216ENST00000483412 GCC1Q96CN9 775 aa11.37□□□□□ -0.59
CDK5RAP2-216ENST00000483412 KIF21AQ7Z4S6 1674 aa11.37□□□□□ -0.59
CDK5RAP2-216ENST00000483412 THOC2Q8NI27 1593 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP2-216ENST00000483412 PDCP20941 246 aa11.37□□□□□ -0.59
CDK5RAP2-216ENST00000483412 CBX1P83916 185 aa11.37□□□□□ -0.59
CDK5RAP2-216ENST00000483412 NOB1Q9ULX3 412 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP2-216ENST00000483412 NLRP6P59044 892 aa11.36□□□□□ -0.59
CDK5RAP2-216ENST00000483412 TRIM34Q9BYJ4 488 aa11.36□□□□□ -0.59
CDK5RAP2-216ENST00000483412 RPGRIP1LQ68CZ1 1315 aa11.36□□□□□ -0.59
CDK5RAP2-216ENST00000483412 TAF3Q5VWG9 929 aa11.36□□□□□ -0.59
CDK5RAP2-216ENST00000483412 ZSCAN30Q86W11 494 aa11.36□□□□□ -0.59
CDK5RAP2-216ENST00000483412 VPS37DQ86XT2 251 aa11.36□□□□□ -0.59
CDK5RAP2-216ENST00000483412 WDR33Q9C0J8 1336 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP2-216ENST00000483412 EIF3JO75822 258 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP2-216ENST00000483412 PDE3AQ14432 1141 aa11.36□□□□□ -0.59
CDK5RAP2-216ENST00000483412 ESCO1Q5FWF5 840 aa11.36□□□□□ -0.59
CDK5RAP2-216ENST00000483412 MAGEC2Q9UBF1 373 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP2-216ENST00000483412 RAPGEF6Q8TEU7 1601 aa11.36□□□□□ -0.59
CDK5RAP2-216ENST00000483412 STK38Q15208 465 aa11.36□□□□□ -0.59
CDK5RAP2-216ENST00000483412 EXOSC9Q06265 439 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP2-216ENST00000483412 ERLIN1O75477 346 aa11.35□□□□□ -0.59
CDK5RAP2-216ENST00000483412 FAM193AP78312 1265 aa11.35□□□□□ -0.59
CDK5RAP2-216ENST00000483412 XBP1P17861 261 aa11.35□□□□□ -0.59
CDK5RAP2-216ENST00000483412 ZFYVE27Q5T4F4 411 aa11.35□□□□□ -0.59
CDK5RAP2-216ENST00000483412 AEBP1Q8IUX7 1158 aa11.35□□□□□ -0.59
CDK5RAP2-216ENST00000483412 TCP11L2Q8N4U5 519 aa11.35□□□□□ -0.59
CDK5RAP2-216ENST00000483412 FANCAO15360 1455 aa11.35□□□□□ -0.59
CDK5RAP2-216ENST00000483412 GPRASP1Q5JY77 1395 aa11.35□□□□□ -0.59
CDK5RAP2-216ENST00000483412 GOLGA6L10A6NI86 522 aa11.35□□□□□ -0.59
CDK5RAP2-216ENST00000483412 PPP2R1AP30153 589 aa11.35□□□□□ -0.59
CDK5RAP2-216ENST00000483412 STK3Q13188 491 aa11.35□□□□□ -0.59
CDK5RAP2-216ENST00000483412 CDK19Q9BWU1 502 aa11.35□□□□□ -0.59
CDK5RAP2-216ENST00000483412 ANKRD30BQ9BXX2 1392 aa11.35□□□□□ -0.59
CDK5RAP2-216ENST00000483412 FYB1O15117 783 aa11.34□□□□□ -0.59
CDK5RAP2-216ENST00000483412 ATP2B1P20020 1258 aa11.34□□□□□ -0.59
CDK5RAP2-216ENST00000483412 AIMP1Q12904 312 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP2-216ENST00000483412 RIC3Q7Z5B4 369 aa11.34□□□□□ -0.59
CDK5RAP2-216ENST00000483412 DNAJC2Q99543 621 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP2-216ENST00000483412 SURF6O75683 361 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP2-216ENST00000483412 CCDC43Q96MW1 224 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP2-216ENST00000483412 SLC26A8Q96RN1 970 aa11.34□□□□□ -0.59
CDK5RAP2-216ENST00000483412 MTHFSP49914 203 aa11.33□□□□□ -0.59
CDK5RAP2-216ENST00000483412 DHX8Q14562 1220 aaKnown RBP11.33□□□□□ -0.59
CDK5RAP2-216ENST00000483412 PPFIBP1Q86W92 1011 aa11.33□□□□□ -0.59
CDK5RAP2-216ENST00000483412 ADAMTS12P58397 1594 aa11.33□□□□□ -0.59
CDK5RAP2-216ENST00000483412 SYCE3A1L190 88 aa11.33□□□□□ -0.6
CDK5RAP2-216ENST00000483412 ANKLE2Q86XL3 938 aa11.33□□□□□ -0.6
CDK5RAP2-216ENST00000483412 ABTB2Q8N961 1025 aa11.33□□□□□ -0.6
CDK5RAP2-216ENST00000483412 CTTNBP2Q8WZ74 1663 aa11.33□□□□□ -0.6
CDK5RAP2-216ENST00000483412 MEX3CQ5U5Q3 659 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP2-216ENST00000483412 SLC12A5Q9H2X9 1139 aa11.33□□□□□ -0.6
CDK5RAP2-216ENST00000483412 CTDP1Q9Y5B0 961 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP2-216ENST00000483412 CLASRPQ8N2M8 674 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP2-216ENST00000483412 DEF6Q9H4E7 631 aa11.32□□□□□ -0.6
CDK5RAP2-216ENST00000483412 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP2-216ENST00000483412 CCDC181Q5TID7 509 aa11.32□□□□□ -0.6
CDK5RAP2-216ENST00000483412 CCDC102AQ96A19 550 aa11.32□□□□□ -0.6
CDK5RAP2-216ENST00000483412 KRT85P78386 507 aa11.32□□□□□ -0.6
CDK5RAP2-216ENST00000483412 CYP46A1Q9Y6A2 500 aa11.32□□□□□ -0.6
CDK5RAP2-216ENST00000483412 MAP4K4O95819 1239 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP2-216ENST00000483412 RAPGEF4Q8WZA2 1011 aa11.32□□□□□ -0.6
CDK5RAP2-216ENST00000483412 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.32□□□□□ -0.62e-6■■■■■ 157.5
CDK5RAP2-216ENST00000483412 DENND4BO75064 1496 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP2-216ENST00000483412 HIP1O00291 1037 aa11.32□□□□□ -0.6
CDK5RAP2-216ENST00000483412 ME1P48163 572 aa11.32□□□□□ -0.6
CDK5RAP2-216ENST00000483412 TSR2Q969E8 191 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP2-216ENST00000483412 NLRP2Q9NX02 1062 aa11.32□□□□□ -0.6
CDK5RAP2-216ENST00000483412 MTMR7Q9Y216 660 aa11.32□□□□□ -0.6
CDK5RAP2-216ENST00000483412 USP8P40818 1118 aa11.31□□□□□ -0.6
CDK5RAP2-216ENST00000483412 CENPHQ9H3R5 247 aa11.31□□□□□ -0.6
CDK5RAP2-216ENST00000483412 CABP1Q9NZU7 370 aa11.31□□□□□ -0.6
CDK5RAP2-216ENST00000483412 NCOA1Q15788 1441 aa11.31□□□□□ -0.6
CDK5RAP2-216ENST00000483412 CBFA2T2O43439 604 aa11.31□□□□□ -0.6
CDK5RAP2-216ENST00000483412 GNAI3P08754 354 aa11.31□□□□□ -0.6
CDK5RAP2-216ENST00000483412 ZNHIT6Q9NWK9 470 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP2-216ENST00000483412 SYTL4Q96C24 671 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP2-216ENST00000483412 ERLIN2O94905 339 aa11.31□□□□□ -0.6
CDK5RAP2-216ENST00000483412 NUP62CLQ9H1M0 184 aa11.31□□□□□ -0.6
CDK5RAP2-216ENST00000483412 RTEL1-TNFRSF6BF6WH68 1400 aa11.31□□□□□ -0.6
CDK5RAP2-216ENST00000483412 CHD1LQ86WJ1 897 aa11.31□□□□□ -0.6
CDK5RAP2-216ENST00000483412 WDR97A6NE52 1622 aa11.3□□□□□ -0.6
CDK5RAP2-216ENST00000483412 PIP4K2AP48426 406 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP2-216ENST00000483412 XPCQ01831 940 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP2-216ENST00000483412 SPATA32Q96LK8 384 aa11.3□□□□□ -0.6
CDK5RAP2-216ENST00000483412 ATP10BO94823 1461 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms