RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 NGLY1Q96IV0 654 aa17.94■□□□□ 0.46
HDAC1-208ENST00000482310 PARD3Q8TEW0 1356 aa17.93■□□□□ 0.46
HDAC1-208ENST00000482310 RXRBP28702 533 aa17.93■□□□□ 0.46
HDAC1-208ENST00000482310 ARHGEF25Q86VW2 580 aa17.93■□□□□ 0.46
HDAC1-208ENST00000482310 CPDO75976 1380 aa17.92■□□□□ 0.46
HDAC1-208ENST00000482310 DIEXFQ68CQ4 756 aaKnown RBP17.92■□□□□ 0.46
HDAC1-208ENST00000482310 LTV1Q96GA3 475 aaPredicted RBP17.92■□□□□ 0.46
HDAC1-208ENST00000482310 CAMTA1Q9Y6Y1 1673 aa17.92■□□□□ 0.46
HDAC1-208ENST00000482310 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.92■□□□□ 0.46
HDAC1-208ENST00000482310 CDK12Q9NYV4 1490 aaPredicted RBP17.91■□□□□ 0.46
HDAC1-208ENST00000482310 ANP32CO43423 234 aa17.91■□□□□ 0.46
HDAC1-208ENST00000482310 STRN4Q9NRL3 753 aa17.91■□□□□ 0.46
HDAC1-208ENST00000482310 BTG4Q9NY30 223 aa17.91■□□□□ 0.46
HDAC1-208ENST00000482310 AATKQ6ZMQ8 1374 aa17.91■□□□□ 0.46
HDAC1-208ENST00000482310 POLKQ9UBT6 870 aa17.9■□□□□ 0.46
HDAC1-208ENST00000482310 RGS12O14924 1447 aa17.89■□□□□ 0.46
HDAC1-208ENST00000482310 PPP2R1AP30153 589 aa17.89■□□□□ 0.45
HDAC1-208ENST00000482310 HOXC9P31274 260 aa17.89■□□□□ 0.45
HDAC1-208ENST00000482310 MTHFSP49914 203 aa17.89■□□□□ 0.45
HDAC1-208ENST00000482310 PRKRIP1Q9H875 184 aaPredicted RBP17.89■□□□□ 0.45
HDAC1-208ENST00000482310 AXIN2Q9Y2T1 843 aa17.89■□□□□ 0.45
HDAC1-208ENST00000482310 FAM208AQ9UK61 1670 aaKnown RBP17.89■□□□□ 0.45
HDAC1-208ENST00000482310 ABCC6O95255 1503 aa17.88■□□□□ 0.45
HDAC1-208ENST00000482310 RALBP1Q15311 655 aa17.88■□□□□ 0.45
HDAC1-208ENST00000482310 RTL1A6NKG5 1358 aa17.88■□□□□ 0.45
HDAC1-208ENST00000482310 FLT4P35916 1363 aa17.88■□□□□ 0.45
HDAC1-208ENST00000482310 SMG6Q86US8 1419 aaKnown RBP17.88■□□□□ 0.45
HDAC1-208ENST00000482310 COL5A2P05997 1499 aaPredicted RBP17.88■□□□□ 0.45
HDAC1-208ENST00000482310 SLIT2O94813 1529 aa17.88■□□□□ 0.45
HDAC1-208ENST00000482310 HSP90AB2PQ58FF8 381 aa17.87■□□□□ 0.45
HDAC1-208ENST00000482310 WNK3Q9BYP7 1800 aa17.86■□□□□ 0.45
HDAC1-208ENST00000482310 CSB-PGBD3P0DP91 1061 aa17.86■□□□□ 0.45
HDAC1-208ENST00000482310 EVA1CP58658 441 aa17.86■□□□□ 0.45
HDAC1-208ENST00000482310 IP6K1Q92551 441 aa17.86■□□□□ 0.45
HDAC1-208ENST00000482310 USP21Q9UK80 565 aa17.86■□□□□ 0.45
HDAC1-208ENST00000482310 MYBBP1AQ9BQG0 1328 aaKnown RBP17.85■□□□□ 0.45
HDAC1-208ENST00000482310 QTRT2Q9H974 415 aaKnown RBP17.85■□□□□ 0.45
HDAC1-208ENST00000482310 CCDC9Q9Y3X0 531 aaKnown RBP17.85■□□□□ 0.45
HDAC1-208ENST00000482310 BCL9LQ86UU0 1499 aa17.84■□□□□ 0.45
HDAC1-208ENST00000482310 BLMP54132 1417 aaPredicted RBP17.84■□□□□ 0.45
HDAC1-208ENST00000482310 ANKRD24Q8TF21 1146 aa17.84■□□□□ 0.45
HDAC1-208ENST00000482310 USP35Q9P2H5 1018 aa17.83■□□□□ 0.44
HDAC1-208ENST00000482310 LARP1Q6PKG0 1096 aaKnown RBP17.82■□□□□ 0.44
HDAC1-208ENST00000482310 UNC5CLQ8IV45 518 aa17.82■□□□□ 0.44
HDAC1-208ENST00000482310 COL3A1P02461 1466 aaPredicted RBP17.82■□□□□ 0.44
HDAC1-208ENST00000482310 INSRP06213 1382 aa17.81■□□□□ 0.44
HDAC1-208ENST00000482310 KIF24Q5T7B8 1368 aa17.81■□□□□ 0.44
HDAC1-208ENST00000482310 ERBB3P21860 1342 aa17.81■□□□□ 0.44
HDAC1-208ENST00000482310 RBM6P78332 1123 aaKnown RBP17.81■□□□□ 0.44
HDAC1-208ENST00000482310 TOM1L2Q6ZVM7 507 aa17.81■□□□□ 0.44
HDAC1-208ENST00000482310 FNBP4Q8N3X1 1017 aaPredicted RBP17.81■□□□□ 0.44
HDAC1-208ENST00000482310 EIF4A2Q14240 407 aaKnown RBP17.8■□□□□ 0.44
HDAC1-208ENST00000482310 USHBP1Q8N6Y0 703 aa17.8■□□□□ 0.44
HDAC1-208ENST00000482310 CFAP53Q96M91 514 aa17.8■□□□□ 0.44
HDAC1-208ENST00000482310 NLRP2Q9NX02 1062 aa17.8■□□□□ 0.44
HDAC1-208ENST00000482310 RGPD1P0DJD0 1748 aa17.8■□□□□ 0.44
HDAC1-208ENST00000482310 GLI3P10071 1580 aa17.79■□□□□ 0.44
HDAC1-208ENST00000482310 WDR17Q8IZU2 1322 aa17.78■□□□□ 0.44
HDAC1-208ENST00000482310 CRB1P82279 1406 aa17.78■□□□□ 0.44
HDAC1-208ENST00000482310 DIAPH1O60610 1272 aaKnown RBP17.77■□□□□ 0.44
HDAC1-208ENST00000482310 CCDC184Q52MB2 194 aa17.77■□□□□ 0.44
HDAC1-208ENST00000482310 ATRNO75882 1429 aa17.77■□□□□ 0.44
HDAC1-208ENST00000482310 PARP4Q9UKK3 1724 aaKnown RBP17.76■□□□□ 0.43
HDAC1-208ENST00000482310 U2SURPO15042 1029 aaKnown RBP17.76■□□□□ 0.43
HDAC1-208ENST00000482310 MIER1Q8N108 512 aa17.76■□□□□ 0.43
HDAC1-208ENST00000482310 BRWD3Q6RI45 1802 aa17.75■□□□□ 0.43
HDAC1-208ENST00000482310 NBPF6Q5VWK0 638 aa17.75■□□□□ 0.43
HDAC1-208ENST00000482310 NBPF4Q96M43 638 aa17.75■□□□□ 0.43
HDAC1-208ENST00000482310 TRPC5Q9UL62 973 aaPredicted RBP17.75■□□□□ 0.43
HDAC1-208ENST00000482310 A0A0G2JS52 829 aa17.74■□□□□ 0.43
HDAC1-208ENST00000482310 IL13P35225 146 aa17.74■□□□□ 0.43
HDAC1-208ENST00000482310 MYT1Q01538 1121 aa17.74■□□□□ 0.43
HDAC1-208ENST00000482310 VPS72Q15906 364 aa17.74■□□□□ 0.43
HDAC1-208ENST00000482310 MRS2Q9HD23 443 aa17.74■□□□□ 0.43
HDAC1-208ENST00000482310 SPATA31A5Q5VU36 1347 aa17.73■□□□□ 0.43
HDAC1-208ENST00000482310 SPATA31A7Q8IWB4 1347 aa17.73■□□□□ 0.43
HDAC1-208ENST00000482310 EYA1Q99502 592 aa17.73■□□□□ 0.43
HDAC1-208ENST00000482310 SPATA31A1Q5TZJ5 1347 aa17.72■□□□□ 0.43
HDAC1-208ENST00000482310 VIRMAQ69YN4 1812 aaKnown RBP17.72■□□□□ 0.43
HDAC1-208ENST00000482310 SRCAPQ6ZRS2 3230 aa17.72■□□□□ 0.43
HDAC1-208ENST00000482310 HMOX1P09601 288 aa17.72■□□□□ 0.43
HDAC1-208ENST00000482310 FAM98CQ17RN3 349 aaKnown RBP17.71■□□□□ 0.43
HDAC1-208ENST00000482310 AEBP1Q8IUX7 1158 aa17.71■□□□□ 0.43
HDAC1-208ENST00000482310 GJD4Q96KN9 370 aaPredicted RBP17.71■□□□□ 0.43
HDAC1-208ENST00000482310 CARD10Q9BWT7 1032 aa17.71■□□□□ 0.43
HDAC1-208ENST00000482310 LRRC37A3O60309 1634 aa17.71■□□□□ 0.43
HDAC1-208ENST00000482310 SHANK3Q9BYB0 1731 aa17.7■□□□□ 0.42
HDAC1-208ENST00000482310 TCP11L2Q8N4U5 519 aa17.7■□□□□ 0.42
HDAC1-208ENST00000482310 NUDCQ9Y266 331 aa17.7■□□□□ 0.42
HDAC1-208ENST00000482310 THSD7AQ9UPZ6 1657 aa17.7■□□□□ 0.42
HDAC1-208ENST00000482310 EP400Q96L91 3159 aa17.7■□□□□ 0.42
HDAC1-208ENST00000482310 KAT6BQ8WYB5 2073 aa17.7■□□□□ 0.42
HDAC1-208ENST00000482310 MEGF6O75095 1541 aa17.69■□□□□ 0.42
HDAC1-208ENST00000482310 U2AF1L5P0DN76 240 aaPredicted RBP17.69■□□□□ 0.42
HDAC1-208ENST00000482310 U2AF1Q01081 240 aaKnown RBP eCLIP17.69■□□□□ 0.42
HDAC1-208ENST00000482310 SULT6B1Q6IMI4 303 aa17.69■□□□□ 0.42
HDAC1-208ENST00000482310 IGSF1Q8N6C5 1336 aa17.69■□□□□ 0.42
HDAC1-208ENST00000482310 WDR43Q15061 677 aaKnown RBP eCLIP17.68■□□□□ 0.42
HDAC1-208ENST00000482310 PKD1L3Q7Z443 1732 aa17.67■□□□□ 0.42
HDAC1-208ENST00000482310 DLG5Q8TDM6 1919 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms