RNA–Protein interactions for RNA: ENST00000482086.5

PCCB-215, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-215ENST00000482086 IL13P35225 146 aa19.42■□□□□ 0.7
PCCB-215ENST00000482086 U2AF1Q01081 240 aaKnown RBP eCLIP19.42■□□□□ 0.7
PCCB-215ENST00000482086 U2SURPO15042 1029 aaKnown RBP19.41■□□□□ 0.7
PCCB-215ENST00000482086 HSP90AB2PQ58FF8 381 aa19.41■□□□□ 0.7
PCCB-215ENST00000482086 BLMP54132 1417 aaPredicted RBP19.41■□□□□ 0.7
PCCB-215ENST00000482086 PLEKHG5O94827 1062 aa19.4■□□□□ 0.7
PCCB-215ENST00000482086 CABLES1Q8TDN4 633 aa19.4■□□□□ 0.7
PCCB-215ENST00000482086 HNRNPUQ00839 825 aaKnown RBP eCLIP19.39■□□□□ 0.69
PCCB-215ENST00000482086 EIF4A2Q14240 407 aaKnown RBP19.39■□□□□ 0.69
PCCB-215ENST00000482086 ZBTB7CA1YPR0 619 aa19.38■□□□□ 0.69
PCCB-215ENST00000482086 ZC3H6P61129 1189 aaKnown RBP19.38■□□□□ 0.69
PCCB-215ENST00000482086 FCHSD2O94868 740 aa19.37■□□□□ 0.69
PCCB-215ENST00000482086 NEFMP07197 916 aa19.36■□□□□ 0.69
PCCB-215ENST00000482086 NGEFQ8N5V2 710 aa19.36■□□□□ 0.69
PCCB-215ENST00000482086 RUNDC1Q96C34 613 aa19.36■□□□□ 0.69
PCCB-215ENST00000482086 COL18A1P39060 1754 aa19.35■□□□□ 0.69
PCCB-215ENST00000482086 RGPD1P0DJD0 1748 aa19.35■□□□□ 0.69
PCCB-215ENST00000482086 KIAA0232Q92628 1395 aa19.35■□□□□ 0.69
PCCB-215ENST00000482086 RGPD5Q99666 1765 aa19.35■□□□□ 0.69
PCCB-215ENST00000482086 PRDM11Q9NQV5 511 aa19.34■□□□□ 0.69
PCCB-215ENST00000482086 JCADQ9P266 1359 aa19.33■□□□□ 0.69
PCCB-215ENST00000482086 FAM208AQ9UK61 1670 aaKnown RBP19.32■□□□□ 0.68
PCCB-215ENST00000482086 ZBED9Q6R2W3 1325 aa19.32■□□□□ 0.68
PCCB-215ENST00000482086 CENPBP07199 599 aaPredicted RBP19.32■□□□□ 0.68
PCCB-215ENST00000482086 IGSF1Q8N6C5 1336 aa19.31■□□□□ 0.68
PCCB-215ENST00000482086 MAPK8IP3Q9UPT6 1336 aa19.31■□□□□ 0.68
PCCB-215ENST00000482086 NCBP3Q53F19 620 aaKnown RBP19.31■□□□□ 0.68
PCCB-215ENST00000482086 ANKRD24Q8TF21 1146 aa19.31■□□□□ 0.68
PCCB-215ENST00000482086 RSPH6AQ9H0K4 717 aa19.31■□□□□ 0.68
PCCB-215ENST00000482086 CCDC146Q8IYE0 955 aa19.3■□□□□ 0.68
PCCB-215ENST00000482086 LTV1Q96GA3 475 aaPredicted RBP19.3■□□□□ 0.68
PCCB-215ENST00000482086 EYA1Q99502 592 aa19.3■□□□□ 0.68
PCCB-215ENST00000482086 COL14A1Q05707 1796 aaKnown RBP19.29■□□□□ 0.68
PCCB-215ENST00000482086 SULT6B1Q6IMI4 303 aa19.29■□□□□ 0.68
PCCB-215ENST00000482086 PLEKHF1Q96S99 279 aa19.29■□□□□ 0.68
PCCB-215ENST00000482086 AXIN2Q9Y2T1 843 aa19.29■□□□□ 0.68
PCCB-215ENST00000482086 ERBB3P21860 1342 aa19.29■□□□□ 0.68
PCCB-215ENST00000482086 HMOX1P09601 288 aa19.28■□□□□ 0.68
PCCB-215ENST00000482086 CHRNA2Q15822 529 aa19.28■□□□□ 0.68
PCCB-215ENST00000482086 KDRP35968 1356 aa19.28■□□□□ 0.68
PCCB-215ENST00000482086 LMO7Q8WWI1 1683 aa19.28■□□□□ 0.68
PCCB-215ENST00000482086 APAF1O14727 1248 aa19.27■□□□□ 0.68
PCCB-215ENST00000482086 PRKAR2BP31323 418 aa19.27■□□□□ 0.68
PCCB-215ENST00000482086 RGPD2P0DJD1 1756 aa19.26■□□□□ 0.67
PCCB-215ENST00000482086 SPATA31A6Q5VVP1 1343 aa19.26■□□□□ 0.67
PCCB-215ENST00000482086 TCP11L2Q8N4U5 519 aa19.25■□□□□ 0.67
PCCB-215ENST00000482086 CAMTA1Q9Y6Y1 1673 aa19.25■□□□□ 0.67
PCCB-215ENST00000482086 FAM83GA6ND36 823 aa19.25■□□□□ 0.67
PCCB-215ENST00000482086 HSPA1LP34931 641 aa19.25■□□□□ 0.67
PCCB-215ENST00000482086 NCAPD2Q15021 1401 aa19.24■□□□□ 0.67
PCCB-215ENST00000482086 CSB-PGBD3P0DP91 1061 aa19.24■□□□□ 0.67
PCCB-215ENST00000482086 NBPF6Q5VWK0 638 aa19.24■□□□□ 0.67
PCCB-215ENST00000482086 NBPF4Q96M43 638 aa19.24■□□□□ 0.67
PCCB-215ENST00000482086 WDR17Q8IZU2 1322 aa19.23■□□□□ 0.67
PCCB-215ENST00000482086 COL5A2P05997 1499 aaPredicted RBP19.22■□□□□ 0.67
PCCB-215ENST00000482086 TMPOP42166 694 aaKnown RBP19.22■□□□□ 0.67
PCCB-215ENST00000482086 EVA1CP58658 441 aa19.22■□□□□ 0.67
PCCB-215ENST00000482086 PDE3BQ13370 1112 aa19.22■□□□□ 0.67
PCCB-215ENST00000482086 CCDC27Q2M243 656 aa19.22■□□□□ 0.67
PCCB-215ENST00000482086 AEBP1Q8IUX7 1158 aa19.22■□□□□ 0.67
PCCB-215ENST00000482086 PLEKHG2Q9H7P9 1386 aa19.22■□□□□ 0.67
PCCB-215ENST00000482086 NUTM2BA6NNL0 878 aaPredicted RBP19.21■□□□□ 0.67
PCCB-215ENST00000482086 NUTM2EB1AL46 878 aaPredicted RBP19.21■□□□□ 0.67
PCCB-215ENST00000482086 NUTM2AQ8IVF1 878 aaPredicted RBP19.21■□□□□ 0.67
PCCB-215ENST00000482086 NLRP2Q9NX02 1062 aa19.21■□□□□ 0.67
PCCB-215ENST00000482086 NFE2L2Q16236 605 aa19.2■□□□□ 0.66
PCCB-215ENST00000482086 NWD2Q9ULI1 1742 aa19.2■□□□□ 0.66
PCCB-215ENST00000482086 ADAMTS2O95450 1211 aa19.19■□□□□ 0.66
PCCB-215ENST00000482086 LMOD3Q0VAK6 560 aa19.19■□□□□ 0.66
PCCB-215ENST00000482086 BTG4Q9NY30 223 aa19.19■□□□□ 0.66
PCCB-215ENST00000482086 SALL2Q9Y467 1007 aaPredicted RBP19.19■□□□□ 0.66
PCCB-215ENST00000482086 PLCH1Q4KWH8 1693 aa19.19■□□□□ 0.66
PCCB-215ENST00000482086 GAS2L2Q8NHY3 880 aa19.18■□□□□ 0.66
PCCB-215ENST00000482086 PHACTR3Q96KR7 559 aa19.18■□□□□ 0.66
PCCB-215ENST00000482086 DLG5Q8TDM6 1919 aa19.18■□□□□ 0.66
PCCB-215ENST00000482086 RIPK4P57078 832 aa19.17■□□□□ 0.66
PCCB-215ENST00000482086 NEUROD2Q15784 382 aa19.17■□□□□ 0.66
PCCB-215ENST00000482086 TOM1L2Q6ZVM7 507 aa19.17■□□□□ 0.66
PCCB-215ENST00000482086 USHBP1Q8N6Y0 703 aa19.17■□□□□ 0.66
PCCB-215ENST00000482086 AMOTQ4VCS5 1084 aa19.17■□□□□ 0.66
PCCB-215ENST00000482086 RAPGEF4Q8WZA2 1011 aa19.17■□□□□ 0.66
PCCB-215ENST00000482086 PHF23Q9BUL5 403 aaPredicted RBP19.17■□□□□ 0.66
PCCB-215ENST00000482086 CARD10Q9BWT7 1032 aa19.17■□□□□ 0.66
PCCB-215ENST00000482086 ZNF521Q96K83 1311 aa19.16■□□□□ 0.66
PCCB-215ENST00000482086 WDR63Q8IWG1 891 aa19.16■□□□□ 0.66
PCCB-215ENST00000482086 WWC1Q8IX03 1113 aa19.16■□□□□ 0.66
PCCB-215ENST00000482086 STRN4Q9NRL3 753 aa19.16■□□□□ 0.66
PCCB-215ENST00000482086 RRP7AQ9Y3A4 280 aaKnown RBP19.16■□□□□ 0.66
PCCB-215ENST00000482086 CRB1P82279 1406 aa19.15■□□□□ 0.66
PCCB-215ENST00000482086 TATP17735 454 aaPredicted RBP19.15■□□□□ 0.66
PCCB-215ENST00000482086 PLEKHO1Q53GL0 409 aaPredicted RBP19.15■□□□□ 0.66
PCCB-215ENST00000482086 SENP3-EIF4A1A0A087X0R7 540 aa19.14■□□□□ 0.65
PCCB-215ENST00000482086 CALD1Q05682 793 aaKnown RBP19.14■□□□□ 0.65
PCCB-215ENST00000482086 GOLGA2Q08379 1002 aa19.14■□□□□ 0.65
PCCB-215ENST00000482086 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.13■□□□□ 0.65
PCCB-215ENST00000482086 SLIT2O94813 1529 aa19.13■□□□□ 0.65
PCCB-215ENST00000482086 NRAPQ86VF7 1730 aa19.13■□□□□ 0.65
PCCB-215ENST00000482086 HTATSF1O43719 755 aaKnown RBP19.12■□□□□ 0.65
PCCB-215ENST00000482086 LARP1Q6PKG0 1096 aaKnown RBP19.12■□□□□ 0.65
PCCB-215ENST00000482086 PARP4Q9UKK3 1724 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms