RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 KNSTRNQ9Y448 316 aa6.98□□□□□ -1.29
HDAC6-223ENST00000480525 RGPD1P0DJD0 1748 aa6.98□□□□□ -1.29
HDAC6-223ENST00000480525 PEAK1Q9H792 1746 aa6.98□□□□□ -1.29
HDAC6-223ENST00000480525 ERBB3P21860 1342 aa6.98□□□□□ -1.29
HDAC6-223ENST00000480525 SPATA31A5Q5VU36 1347 aa6.98□□□□□ -1.29
HDAC6-223ENST00000480525 SPATA31A7Q8IWB4 1347 aa6.98□□□□□ -1.29
HDAC6-223ENST00000480525 WDR17Q8IZU2 1322 aa6.98□□□□□ -1.29
HDAC6-223ENST00000480525 RGPD3A6NKT7 1758 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-223ENST00000480525 RGPD4Q7Z3J3 1758 aa6.97□□□□□ -1.29
HDAC6-223ENST00000480525 NME9Q86XW9 330 aa6.97□□□□□ -1.29
HDAC6-223ENST00000480525 IP6K1Q92551 441 aa6.97□□□□□ -1.29
HDAC6-223ENST00000480525 GJD4Q96KN9 370 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-223ENST00000480525 C8orf37Q96NL8 207 aa6.97□□□□□ -1.29
HDAC6-223ENST00000480525 KAT6BQ8WYB5 2073 aa6.97□□□□□ -1.29
HDAC6-223ENST00000480525 SPATA31A1Q5TZJ5 1347 aa6.97□□□□□ -1.29
HDAC6-223ENST00000480525 PKD1L3Q7Z443 1732 aa6.96□□□□□ -1.29
HDAC6-223ENST00000480525 DISP2A7MBM2 1401 aa6.96□□□□□ -1.3
HDAC6-223ENST00000480525 LMOD2Q6P5Q4 547 aa6.96□□□□□ -1.3
HDAC6-223ENST00000480525 CABLES1Q8TDN4 633 aa6.96□□□□□ -1.3
HDAC6-223ENST00000480525 LRRC37A3O60309 1634 aa6.96□□□□□ -1.3
HDAC6-223ENST00000480525 BRWD3Q6RI45 1802 aa6.96□□□□□ -1.3
HDAC6-223ENST00000480525 PARD3Q8TEW0 1356 aa6.95□□□□□ -1.3
HDAC6-223ENST00000480525 NUTM2BA6NNL0 878 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-223ENST00000480525 NUTM2EB1AL46 878 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-223ENST00000480525 ADAMTS2O95450 1211 aa6.95□□□□□ -1.3
HDAC6-223ENST00000480525 RXRBP28702 533 aa6.95□□□□□ -1.3
HDAC6-223ENST00000480525 NUTM2AQ8IVF1 878 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-223ENST00000480525 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.95□□□□□ -1.3
HDAC6-223ENST00000480525 CARD10Q9BWT7 1032 aa6.95□□□□□ -1.3
HDAC6-223ENST00000480525 QTRT2Q9H974 415 aaKnown RBP6.95□□□□□ -1.3
HDAC6-223ENST00000480525 BTG4Q9NY30 223 aa6.95□□□□□ -1.3
HDAC6-223ENST00000480525 MAP3K19Q56UN5 1328 aa6.95□□□□□ -1.3
HDAC6-223ENST00000480525 KDRP35968 1356 aa6.95□□□□□ -1.3
HDAC6-223ENST00000480525 EP400Q96L91 3159 aa6.94□□□□□ -1.3
HDAC6-223ENST00000480525 RGS12O14924 1447 aa6.94□□□□□ -1.3
HDAC6-223ENST00000480525 HOXC9P31274 260 aa6.94□□□□□ -1.3
HDAC6-223ENST00000480525 POTEAQ6S8J7 498 aa6.94□□□□□ -1.3
HDAC6-223ENST00000480525 SBF2Q86WG5 1849 aa6.94□□□□□ -1.3
HDAC6-223ENST00000480525 TNS2Q63HR2 1409 aa6.93□□□□□ -1.3
HDAC6-223ENST00000480525 SHANK3Q9BYB0 1731 aa6.93□□□□□ -1.3
HDAC6-223ENST00000480525 RGPD2P0DJD1 1756 aa6.93□□□□□ -1.3
HDAC6-223ENST00000480525 ZC3H6P61129 1189 aaKnown RBP6.93□□□□□ -1.3
HDAC6-223ENST00000480525 CCDC125Q86Z20 511 aa6.93□□□□□ -1.3
HDAC6-223ENST00000480525 TCP11L2Q8N4U5 519 aa6.93□□□□□ -1.3
HDAC6-223ENST00000480525 GGNBP2Q9H3C7 697 aa6.93□□□□□ -1.3
HDAC6-223ENST00000480525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.93□□□□□ -1.32e-6■■■□□ 16
HDAC6-223ENST00000480525 COL3A1P02461 1466 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-223ENST00000480525 RALBP1Q15311 655 aa6.92□□□□□ -1.3
HDAC6-223ENST00000480525 POLKQ9UBT6 870 aa6.92□□□□□ -1.3
HDAC6-223ENST00000480525 AXIN2Q9Y2T1 843 aa6.92□□□□□ -1.3
HDAC6-223ENST00000480525 IGSF1Q8N6C5 1336 aa6.92□□□□□ -1.3
HDAC6-223ENST00000480525 OVOS2A0A0G2JMS6 1433 aa6.92□□□□□ -1.3
HDAC6-223ENST00000480525 ADAMTS7Q9UKP4 1686 aa6.91□□□□□ -1.3
HDAC6-223ENST00000480525 NUTM2GQ5VZR2 741 aa6.91□□□□□ -1.3
HDAC6-223ENST00000480525 MORC1Q86VD1 984 aa6.91□□□□□ -1.3
HDAC6-223ENST00000480525 ZRANB1Q9UGI0 708 aa6.91□□□□□ -1.3
HDAC6-223ENST00000480525 ZNF831Q5JPB2 1677 aa6.9□□□□□ -1.3
HDAC6-223ENST00000480525 NHSQ6T4R5 1651 aa6.9□□□□□ -1.3
HDAC6-223ENST00000480525 TNS1Q9HBL0 1735 aaKnown RBP6.9□□□□□ -1.3
HDAC6-223ENST00000480525 ZNF316A6NFI3 1004 aaPredicted RBP6.9□□□□□ -1.3
HDAC6-223ENST00000480525 HMGB2P26583 209 aaKnown RBP6.9□□□□□ -1.3
HDAC6-223ENST00000480525 AMPHP49418 695 aa6.9□□□□□ -1.3
HDAC6-223ENST00000480525 EVA1CP58658 441 aa6.9□□□□□ -1.3
HDAC6-223ENST00000480525 LARP1Q6PKG0 1096 aaKnown RBP6.9□□□□□ -1.3
HDAC6-223ENST00000480525 ANKRD24Q8TF21 1146 aa6.9□□□□□ -1.3
HDAC6-223ENST00000480525 IL2RBP14784 551 aa6.89□□□□□ -1.31
HDAC6-223ENST00000480525 CHRNA2Q15822 529 aa6.89□□□□□ -1.31
HDAC6-223ENST00000480525 TOM1L2Q6ZVM7 507 aa6.89□□□□□ -1.31
HDAC6-223ENST00000480525 CICQ96RK0 1608 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-223ENST00000480525 VIRMAQ69YN4 1812 aaKnown RBP6.89□□□□□ -1.31
HDAC6-223ENST00000480525 SOCS7O14512 581 aa6.88□□□□□ -1.31
HDAC6-223ENST00000480525 HSP90AB2PQ58FF8 381 aa6.88□□□□□ -1.31
HDAC6-223ENST00000480525 EMILIN1Q9Y6C2 1016 aa6.88□□□□□ -1.31
HDAC6-223ENST00000480525 SCN11AQ9UI33 1791 aa6.87□□□□□ -1.31
HDAC6-223ENST00000480525 IL13P35225 146 aa6.87□□□□□ -1.31
HDAC6-223ENST00000480525 RRS1Q15050 365 aaKnown RBP6.87□□□□□ -1.31
HDAC6-223ENST00000480525 FAM196AQ6ZSG2 479 aa6.87□□□□□ -1.31
HDAC6-223ENST00000480525 KRT27Q7Z3Y8 459 aa6.87□□□□□ -1.31
HDAC6-223ENST00000480525 SEPT12Q8IYM1 358 aa6.87□□□□□ -1.31
HDAC6-223ENST00000480525 POLR3GLQ9BT43 218 aa6.87□□□□□ -1.31
HDAC6-223ENST00000480525 STRN4Q9NRL3 753 aa6.87□□□□□ -1.31
HDAC6-223ENST00000480525 ITGB4P16144 1822 aa6.87□□□□□ -1.31
HDAC6-223ENST00000480525 RREB1Q92766 1687 aa6.87□□□□□ -1.31
HDAC6-223ENST00000480525 MEGF6O75095 1541 aa6.86□□□□□ -1.31
HDAC6-223ENST00000480525 MYBBP1AQ9BQG0 1328 aaKnown RBP6.86□□□□□ -1.31
HDAC6-223ENST00000480525 PCDH11XQ9BZA7 1347 aa6.86□□□□□ -1.31
HDAC6-223ENST00000480525 PCDH11YQ9BZA8 1340 aa6.86□□□□□ -1.31
HDAC6-223ENST00000480525 PPP2R1AP30153 589 aa6.86□□□□□ -1.31
HDAC6-223ENST00000480525 MTHFSP49914 203 aa6.86□□□□□ -1.31
HDAC6-223ENST00000480525 EIF4A2Q14240 407 aaKnown RBP6.86□□□□□ -1.31
HDAC6-223ENST00000480525 NKX1-1Q15270 411 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-223ENST00000480525 DDB1Q16531 1140 aa6.86□□□□□ -1.31
HDAC6-223ENST00000480525 AMOTQ4VCS5 1084 aa6.86□□□□□ -1.31
HDAC6-223ENST00000480525 NCBP3Q53F19 620 aaKnown RBP6.86□□□□□ -1.31
HDAC6-223ENST00000480525 NBPF6Q5VWK0 638 aa6.86□□□□□ -1.31
HDAC6-223ENST00000480525 NBPF4Q96M43 638 aa6.86□□□□□ -1.31
HDAC6-223ENST00000480525 CFAP53Q96M91 514 aa6.86□□□□□ -1.31
HDAC6-223ENST00000480525 PRKRIP1Q9H875 184 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-223ENST00000480525 LY75O60449 1722 aa6.86□□□□□ -1.31
HDAC6-223ENST00000480525 QSER1Q2KHR3 1735 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms