RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 PPP1R26Q5T8A7 1209 aaPredicted RBP8.96□□□□□ -0.98
CMSS1-204ENST00000479555 RSPH6AQ9H0K4 717 aa8.96□□□□□ -0.98
CMSS1-204ENST00000479555 OCSTAMPQ9BR26 566 aa8.95□□□□□ -0.98
CMSS1-204ENST00000479555 FAM117AQ9C073 453 aa8.95□□□□□ -0.98
CMSS1-204ENST00000479555 ATP1B4Q9UN42 357 aaPredicted RBP8.95□□□□□ -0.98
CMSS1-204ENST00000479555 EMILIN1Q9Y6C2 1016 aa8.95□□□□□ -0.98
CMSS1-204ENST00000479555 FAM181BA6NEQ2 426 aa8.94□□□□□ -0.98
CMSS1-204ENST00000479555 EPS8L1Q8TE68 723 aa8.94□□□□□ -0.98
CMSS1-204ENST00000479555 ARHGAP9Q9BRR9 750 aa8.94□□□□□ -0.98
CMSS1-204ENST00000479555 FKBPLQ9UIM3 349 aa8.94□□□□□ -0.98
CMSS1-204ENST00000479555 AGBL1Q96MI9 1066 aa8.93□□□□□ -0.98
CMSS1-204ENST00000479555 TSEN34Q9BSV6 310 aaKnown RBP8.93□□□□□ -0.98
CMSS1-204ENST00000479555 KDM4CQ9H3R0 1056 aa8.93□□□□□ -0.98
CMSS1-204ENST00000479555 TTLL8A6PVC2 850 aa8.92□□□□□ -0.98
CMSS1-204ENST00000479555 AP1G2O75843 785 aa8.92□□□□□ -0.98
CMSS1-204ENST00000479555 GPR161Q8N6U8 529 aaKnown RBP8.92□□□□□ -0.98
CMSS1-204ENST00000479555 KCTD15Q96SI1 283 aaPredicted RBP8.92□□□□□ -0.98
CMSS1-204ENST00000479555 KRT76Q01546 638 aa8.91□□□□□ -0.98
CMSS1-204ENST00000479555 SKIV2LQ15477 1246 aaKnown RBP8.91□□□□□ -0.98
CMSS1-204ENST00000479555 GPKOWQ92917 476 aaPredicted RBP eCLIP8.91□□□□□ -0.98
CMSS1-204ENST00000479555 SLC10A4Q96EP9 437 aa8.91□□□□□ -0.98
CMSS1-204ENST00000479555 HMX1Q9NP08 348 aaPredicted RBP8.91□□□□□ -0.98
CMSS1-204ENST00000479555 SLC24A1O60721 1099 aa8.9□□□□□ -0.98
CMSS1-204ENST00000479555 RAB15P59190 212 aa8.9□□□□□ -0.98
CMSS1-204ENST00000479555 PTSQ03393 145 aa8.9□□□□□ -0.98
CMSS1-204ENST00000479555 SH3D19Q5HYK7 790 aa8.9□□□□□ -0.98
CMSS1-204ENST00000479555 INTS6LQ5JSJ4 861 aaKnown RBP8.9□□□□□ -0.98
CMSS1-204ENST00000479555 PDXDC2PQ6P474 469 aa8.9□□□□□ -0.98
CMSS1-204ENST00000479555 ZBTB33Q86T24 672 aa8.9□□□□□ -0.98
CMSS1-204ENST00000479555 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.9□□□□□ -0.98
CMSS1-204ENST00000479555 RELBQ01201 579 aa8.89□□□□□ -0.99
CMSS1-204ENST00000479555 Q6ZVU0 165 aa8.89□□□□□ -0.99
CMSS1-204ENST00000479555 TMPRSS4Q9NRS4 437 aa8.89□□□□□ -0.99
CMSS1-204ENST00000479555 PGPEP1Q9NXJ5 209 aa8.89□□□□□ -0.99
CMSS1-204ENST00000479555 CTSOP43234 321 aaPredicted RBP8.88□□□□□ -0.99
CMSS1-204ENST00000479555 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.88□□□□□ -0.99
CMSS1-204ENST00000479555 ADAM32Q8TC27 787 aa8.88□□□□□ -0.99
CMSS1-204ENST00000479555 SPINT1O43278 529 aa8.87□□□□□ -0.99
CMSS1-204ENST00000479555 CNTNAP3BQ96NU0 1288 aa8.87□□□□□ -0.99
CMSS1-204ENST00000479555 INSM2Q96T92 566 aaPredicted RBP8.87□□□□□ -0.99
CMSS1-204ENST00000479555 CNTNAP3Q9BZ76 1288 aa8.87□□□□□ -0.99
CMSS1-204ENST00000479555 PPP2R2DQ66LE6 453 aa8.86□□□□□ -0.99
CMSS1-204ENST00000479555 ZNF395Q9H8N7 513 aaPredicted RBP8.86□□□□□ -0.99
CMSS1-204ENST00000479555 USP17L8P0C7I0 530 aa8.85□□□□□ -0.99
CMSS1-204ENST00000479555 CCDC155Q8N6L0 562 aa8.85□□□□□ -0.99
CMSS1-204ENST00000479555 PTK2Q05397 1052 aa8.84□□□□□ -0.99
CMSS1-204ENST00000479555 RNFT1Q5M7Z0 435 aa8.84□□□□□ -0.99
CMSS1-204ENST00000479555 ZNF784Q8NCA9 323 aaPredicted RBP8.83□□□□□ -1
CMSS1-204ENST00000479555 DDRGK1Q96HY6 314 aa8.83□□□□□ -1
CMSS1-204ENST00000479555 POLMQ9NP87 494 aaPredicted RBP8.83□□□□□ -1
CMSS1-204ENST00000479555 ZC3H4Q9UPT8 1303 aaKnown RBP8.82□□□□□ -1
CMSS1-204ENST00000479555 ADD1P35611 737 aaKnown RBP8.82□□□□□ -1
CMSS1-204ENST00000479555 COL25A1Q9BXS0 654 aaPredicted RBP8.82□□□□□ -1
CMSS1-204ENST00000479555 CDC14CA4D256 554 aa8.81□□□□□ -1
CMSS1-204ENST00000479555 DHX9Q08211 1270 aaKnown RBP8.81□□□□□ -1
CMSS1-204ENST00000479555 VWA5B2Q8N398 1253 aa8.81□□□□□ -1
CMSS1-204ENST00000479555 CDV3Q9UKY7 258 aaKnown RBP8.81□□□□□ -1
CMSS1-204ENST00000479555 SLC35F4A4IF30 521 aa8.8□□□□□ -1
CMSS1-204ENST00000479555 ERVH48-1M5A8F1 160 aa8.8□□□□□ -1
CMSS1-204ENST00000479555 RFC5P40937 340 aa8.8□□□□□ -1
CMSS1-204ENST00000479555 KDF1Q8NAX2 398 aaPredicted RBP8.8□□□□□ -1
CMSS1-204ENST00000479555 RNF217Q8TC41 542 aa8.8□□□□□ -1
CMSS1-204ENST00000479555 LILRA1O75019 489 aa8.79□□□□□ -1
CMSS1-204ENST00000479555 GSK3AP49840 483 aa8.79□□□□□ -1
CMSS1-204ENST00000479555 FOXD4L5Q5VV16 416 aaPredicted RBP8.79□□□□□ -1
CMSS1-204ENST00000479555 DZIP3Q86Y13 1208 aaKnown RBP8.79□□□□□ -1
CMSS1-204ENST00000479555 WHAMMQ8TF30 809 aa8.79□□□□□ -1
CMSS1-204ENST00000479555 TRIM34Q9BYJ4 488 aa8.79□□□□□ -1
CMSS1-204ENST00000479555 SENP3-EIF4A1A0A087X0R7 540 aa8.78□□□□□ -1
CMSS1-204ENST00000479555 ITGA6P23229 1130 aa8.78□□□□□ -1
CMSS1-204ENST00000479555 CYLDQ9NQC7 956 aa8.78□□□□□ -1
CMSS1-204ENST00000479555 ADH1AP07327 375 aa8.77□□□□□ -1.01
CMSS1-204ENST00000479555 NBPF20Q3BBV1 942 aa8.77□□□□□ -1.01
CMSS1-204ENST00000479555 GPSM3Q9Y4H4 160 aa8.77□□□□□ -1.01
CMSS1-204ENST00000479555 SUZ12Q15022 739 aaKnown RBP8.76□□□□□ -1.01
CMSS1-204ENST00000479555 ZNF385CQ66K41 422 aaPredicted RBP8.76□□□□□ -1.01
CMSS1-204ENST00000479555 KCTD17Q8N5Z5 321 aa8.76□□□□□ -1.01
CMSS1-204ENST00000479555 NANOS1Q8WY41 292 aaKnown RBP8.76□□□□□ -1.01
CMSS1-204ENST00000479555 CUEDC1Q9NWM3 386 aaPredicted RBP8.76□□□□□ -1.01
CMSS1-204ENST00000479555 ADAMTS8Q9UP79 889 aa8.75□□□□□ -1.01
CMSS1-204ENST00000479555 ESPNB1AK53 854 aa8.74□□□□□ -1.01
CMSS1-204ENST00000479555 RHOQP17081 205 aa8.74□□□□□ -1.01
CMSS1-204ENST00000479555 PTGIRP43119 386 aa8.74□□□□□ -1.01
CMSS1-204ENST00000479555 SV2AQ7L0J3 742 aa8.73□□□□□ -1.01
CMSS1-204ENST00000479555 SVOPQ8N4V2 548 aa8.73□□□□□ -1.01
CMSS1-204ENST00000479555 GIGYF1O75420 1035 aaPredicted RBP8.72□□□□□ -1.01
CMSS1-204ENST00000479555 KCNMA1Q12791 1236 aa8.72□□□□□ -1.01
CMSS1-204ENST00000479555 PRICKLE2Q7Z3G6 844 aa8.72□□□□□ -1.01
CMSS1-204ENST00000479555 PCDHB9Q9Y5E1 797 aa8.72□□□□□ -1.01
CMSS1-204ENST00000479555 FBXO45P0C2W1 286 aa8.71□□□□□ -1.02
CMSS1-204ENST00000479555 PNMA1Q8ND90 353 aa8.71□□□□□ -1.02
CMSS1-204ENST00000479555 IL27Q8NEV9 243 aa8.7□□□□□ -1.02
CMSS1-204ENST00000479555 RASSF7Q02833 373 aa8.69□□□□□ -1.02
CMSS1-204ENST00000479555 GAS6Q14393 721 aa8.69□□□□□ -1.02
CMSS1-204ENST00000479555 LYSMD3Q7Z3D4 306 aa8.69□□□□□ -1.02
CMSS1-204ENST00000479555 GJD4Q96KN9 370 aaPredicted RBP8.69□□□□□ -1.02
CMSS1-204ENST00000479555 PCMTD1Q96MG8 357 aaPredicted RBP8.69□□□□□ -1.02
CMSS1-204ENST00000479555 MEN1O00255 615 aa8.68□□□□□ -1.02
CMSS1-204ENST00000479555 ZBBXA8MT70 800 aa8.67□□□□□ -1.02
CMSS1-204ENST00000479555 GPR25O00155 361 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms