RNA–Protein interactions for RNA: ENST00000476931.1

RPN1-202, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-202ENST00000476931 GJD4Q96KN9 370 aaPredicted RBP22.99■■□□□ 1.27
RPN1-202ENST00000476931 FBLN1P23142 703 aa22.98■■□□□ 1.27
RPN1-202ENST00000476931 RRS1Q15050 365 aaKnown RBP22.98■■□□□ 1.27
RPN1-202ENST00000476931 STRN4Q9NRL3 753 aa22.98■■□□□ 1.27
RPN1-202ENST00000476931 NWD2Q9ULI1 1742 aa22.98■■□□□ 1.27
RPN1-202ENST00000476931 RTL1A6NKG5 1358 aa22.98■■□□□ 1.27
RPN1-202ENST00000476931 ATRNO75882 1429 aa22.98■■□□□ 1.27
RPN1-202ENST00000476931 HOXC9P31274 260 aa22.97■■□□□ 1.27
RPN1-202ENST00000476931 POLKQ9UBT6 870 aa22.97■■□□□ 1.27
RPN1-202ENST00000476931 BLMP54132 1417 aaPredicted RBP22.97■■□□□ 1.27
RPN1-202ENST00000476931 TNNT2P45379 298 aaPredicted RBP22.96■■□□□ 1.27
RPN1-202ENST00000476931 CCDC9Q9Y3X0 531 aaKnown RBP22.96■■□□□ 1.27
RPN1-202ENST00000476931 CAMTA1Q9Y6Y1 1673 aa22.96■■□□□ 1.27
RPN1-202ENST00000476931 FLT4P35916 1363 aa22.94■■□□□ 1.26
RPN1-202ENST00000476931 SPATA31A5Q5VU36 1347 aa22.94■■□□□ 1.26
RPN1-202ENST00000476931 SPATA31A7Q8IWB4 1347 aa22.94■■□□□ 1.26
RPN1-202ENST00000476931 WDR17Q8IZU2 1322 aa22.94■■□□□ 1.26
RPN1-202ENST00000476931 CSB-PGBD3P0DP91 1061 aa22.94■■□□□ 1.26
RPN1-202ENST00000476931 THRAP3Q9Y2W1 955 aaKnown RBP22.94■■□□□ 1.26
RPN1-202ENST00000476931 LARP1Q6PKG0 1096 aaKnown RBP22.93■■□□□ 1.26
RPN1-202ENST00000476931 COL5A2P05997 1499 aaPredicted RBP22.92■■□□□ 1.26
RPN1-202ENST00000476931 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.92■■□□□ 1.26
RPN1-202ENST00000476931 PPM1GO15355 546 aaPredicted RBP22.92■■□□□ 1.26
RPN1-202ENST00000476931 ONECUT3O60422 494 aaPredicted RBP22.92■■□□□ 1.26
RPN1-202ENST00000476931 TOM1L2Q6ZVM7 507 aa22.92■■□□□ 1.26
RPN1-202ENST00000476931 ANKRD24Q8TF21 1146 aa22.92■■□□□ 1.26
RPN1-202ENST00000476931 EMILIN1Q9Y6C2 1016 aa22.92■■□□□ 1.26
RPN1-202ENST00000476931 LMO7Q8WWI1 1683 aa22.92■■□□□ 1.26
RPN1-202ENST00000476931 COL18A1P39060 1754 aa22.91■■□□□ 1.26
RPN1-202ENST00000476931 INSRP06213 1382 aa22.91■■□□□ 1.26
RPN1-202ENST00000476931 PLCH1Q4KWH8 1693 aa22.91■■□□□ 1.26
RPN1-202ENST00000476931 ERBB3P21860 1342 aa22.91■■□□□ 1.26
RPN1-202ENST00000476931 SPATA31A1Q5TZJ5 1347 aa22.91■■□□□ 1.26
RPN1-202ENST00000476931 CARD10Q9BWT7 1032 aa22.91■■□□□ 1.26
RPN1-202ENST00000476931 ANKRD26Q9UPS8 1709 aa22.91■■□□□ 1.26
RPN1-202ENST00000476931 HSP90AB2PQ58FF8 381 aa22.9■■□□□ 1.26
RPN1-202ENST00000476931 RALBP1Q15311 655 aa22.89■■□□□ 1.25
RPN1-202ENST00000476931 BARGINQ6ZT62 677 aa22.89■■□□□ 1.25
RPN1-202ENST00000476931 TCP11L2Q8N4U5 519 aa22.89■■□□□ 1.25
RPN1-202ENST00000476931 CRB1P82279 1406 aa22.89■■□□□ 1.25
RPN1-202ENST00000476931 MTHFSP49914 203 aa22.87■■□□□ 1.25
RPN1-202ENST00000476931 CNGB1Q14028 1251 aaPredicted RBP22.87■■□□□ 1.25
RPN1-202ENST00000476931 CDCA7Q9BWT1 371 aaPredicted RBP22.87■■□□□ 1.25
RPN1-202ENST00000476931 SMG6Q86US8 1419 aaKnown RBP22.87■■□□□ 1.25
RPN1-202ENST00000476931 CDK12Q9NYV4 1490 aaPredicted RBP22.86■■□□□ 1.25
RPN1-202ENST00000476931 LTV1Q96GA3 475 aaPredicted RBP22.86■■□□□ 1.25
RPN1-202ENST00000476931 NLRP2Q9NX02 1062 aa22.86■■□□□ 1.25
RPN1-202ENST00000476931 LTN1O94822 1766 aa22.86■■□□□ 1.25
RPN1-202ENST00000476931 NRAPQ86VF7 1730 aa22.85■■□□□ 1.25
RPN1-202ENST00000476931 USP35Q9P2H5 1018 aa22.84■■□□□ 1.25
RPN1-202ENST00000476931 MAP2P11137 1827 aaKnown RBP22.82■■□□□ 1.24
RPN1-202ENST00000476931 PARD3Q8TEW0 1356 aa22.82■■□□□ 1.24
RPN1-202ENST00000476931 PPP2R1AP30153 589 aa22.82■■□□□ 1.24
RPN1-202ENST00000476931 FAM98CQ17RN3 349 aaKnown RBP22.82■■□□□ 1.24
RPN1-202ENST00000476931 CFAP53Q96M91 514 aa22.81■■□□□ 1.24
RPN1-202ENST00000476931 SEPT12Q8IYM1 358 aa22.8■■□□□ 1.24
RPN1-202ENST00000476931 NBPF6Q5VWK0 638 aa22.79■■□□□ 1.24
RPN1-202ENST00000476931 NBPF4Q96M43 638 aa22.79■■□□□ 1.24
RPN1-202ENST00000476931 EIF4A2Q14240 407 aaKnown RBP22.78■■□□□ 1.24
RPN1-202ENST00000476931 GLI3P10071 1580 aa22.77■■□□□ 1.24
RPN1-202ENST00000476931 RGPD5Q99666 1765 aa22.76■■□□□ 1.23
RPN1-202ENST00000476931 A0A0G2JS52 829 aa22.76■■□□□ 1.23
RPN1-202ENST00000476931 DIAPH1O60610 1272 aaKnown RBP22.76■■□□□ 1.23
RPN1-202ENST00000476931 IL2RBP14784 551 aa22.76■■□□□ 1.23
RPN1-202ENST00000476931 MYT1Q01538 1121 aa22.76■■□□□ 1.23
RPN1-202ENST00000476931 PRKRIP1Q9H875 184 aaPredicted RBP22.76■■□□□ 1.23
RPN1-202ENST00000476931 PEAK1Q9H792 1746 aa22.76■■□□□ 1.23
RPN1-202ENST00000476931 IL13P35225 146 aa22.75■■□□□ 1.23
RPN1-202ENST00000476931 EYA1Q99502 592 aa22.75■■□□□ 1.23
RPN1-202ENST00000476931 EXOC5O00471 708 aa22.74■■□□□ 1.23
RPN1-202ENST00000476931 ILDR2Q71H61 639 aa22.74■■□□□ 1.23
RPN1-202ENST00000476931 RAPGEF4Q8WZA2 1011 aa22.73■■□□□ 1.23
RPN1-202ENST00000476931 NUDCQ9Y266 331 aa22.73■■□□□ 1.23
RPN1-202ENST00000476931 MYBBP1AQ9BQG0 1328 aaKnown RBP22.73■■□□□ 1.23
RPN1-202ENST00000476931 FAM208AQ9UK61 1670 aaKnown RBP22.72■■□□□ 1.23
RPN1-202ENST00000476931 ANP32CO43423 234 aa22.72■■□□□ 1.23
RPN1-202ENST00000476931 PDE3BQ13370 1112 aa22.72■■□□□ 1.23
RPN1-202ENST00000476931 DDB1Q16531 1140 aa22.72■■□□□ 1.23
RPN1-202ENST00000476931 KRT27Q7Z3Y8 459 aa22.72■■□□□ 1.23
RPN1-202ENST00000476931 RGS12O14924 1447 aa22.72■■□□□ 1.23
RPN1-202ENST00000476931 IGSF1Q8N6C5 1336 aa22.7■■□□□ 1.22
RPN1-202ENST00000476931 TATP17735 454 aaPredicted RBP22.69■■□□□ 1.22
RPN1-202ENST00000476931 DISP2A7MBM2 1401 aa22.68■■□□□ 1.22
RPN1-202ENST00000476931 PLEKHG2Q9H7P9 1386 aa22.68■■□□□ 1.22
RPN1-202ENST00000476931 NCAPD2Q15021 1401 aa22.67■■□□□ 1.22
RPN1-202ENST00000476931 USHBP1Q8N6Y0 703 aa22.67■■□□□ 1.22
RPN1-202ENST00000476931 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.67■■□□□ 1.22
RPN1-202ENST00000476931 SULT6B1Q6IMI4 303 aa22.65■■□□□ 1.22
RPN1-202ENST00000476931 ZCRB1Q8TBF4 217 aaKnown RBP22.65■■□□□ 1.22
RPN1-202ENST00000476931 THSD7AQ9UPZ6 1657 aa22.65■■□□□ 1.22
RPN1-202ENST00000476931 U2SURPO15042 1029 aaKnown RBP22.63■■□□□ 1.21
RPN1-202ENST00000476931 FAM196AQ6ZSG2 479 aa22.63■■□□□ 1.21
RPN1-202ENST00000476931 SPG7Q9UQ90 795 aa22.63■■□□□ 1.21
RPN1-202ENST00000476931 AMOTQ4VCS5 1084 aa22.62■■□□□ 1.21
RPN1-202ENST00000476931 KDRP35968 1356 aa22.62■■□□□ 1.21
RPN1-202ENST00000476931 COL3A1P02461 1466 aaPredicted RBP22.6■■□□□ 1.21
RPN1-202ENST00000476931 OVOS2A0A0G2JMS6 1433 aa22.6■■□□□ 1.21
RPN1-202ENST00000476931 FCHSD2O94868 740 aa22.6■■□□□ 1.21
RPN1-202ENST00000476931 PLEKHO1Q53GL0 409 aaPredicted RBP22.6■■□□□ 1.21
RPN1-202ENST00000476931 CCDC125Q86Z20 511 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms