RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 GLI3P10071 1580 aa19.7■□□□□ 0.74
CCNL1-217ENST00000476367 COL5A2P05997 1499 aaPredicted RBP19.7■□□□□ 0.74
CCNL1-217ENST00000476367 CCDC9Q9Y3X0 531 aaKnown RBP19.69■□□□□ 0.74
CCNL1-217ENST00000476367 ABCC6O95255 1503 aa19.69■□□□□ 0.74
CCNL1-217ENST00000476367 MAP2P11137 1827 aaKnown RBP19.68■□□□□ 0.74
CCNL1-217ENST00000476367 NSD2O96028 1365 aa19.68■□□□□ 0.74
CCNL1-217ENST00000476367 ILDR2Q71H61 639 aa19.68■□□□□ 0.74
CCNL1-217ENST00000476367 PEAK1Q9H792 1746 aa19.67■□□□□ 0.74
CCNL1-217ENST00000476367 RXRBP28702 533 aa19.66■□□□□ 0.74
CCNL1-217ENST00000476367 RRS1Q15050 365 aaKnown RBP19.66■□□□□ 0.74
CCNL1-217ENST00000476367 CC2D1BQ5T0F9 858 aaKnown RBP19.66■□□□□ 0.74
CCNL1-217ENST00000476367 MAP3K19Q56UN5 1328 aa19.66■□□□□ 0.74
CCNL1-217ENST00000476367 TNNT2P45379 298 aaPredicted RBP19.65■□□□□ 0.74
CCNL1-217ENST00000476367 EVA1CP58658 441 aa19.65■□□□□ 0.74
CCNL1-217ENST00000476367 RBM6P78332 1123 aaKnown RBP19.65■□□□□ 0.74
CCNL1-217ENST00000476367 VPS72Q15906 364 aa19.65■□□□□ 0.74
CCNL1-217ENST00000476367 AXIN2Q9Y2T1 843 aa19.65■□□□□ 0.74
CCNL1-217ENST00000476367 CNGB1Q14028 1251 aaPredicted RBP19.65■□□□□ 0.74
CCNL1-217ENST00000476367 GJD4Q96KN9 370 aaPredicted RBP19.64■□□□□ 0.73
CCNL1-217ENST00000476367 RGS12O14924 1447 aa19.63■□□□□ 0.73
CCNL1-217ENST00000476367 AMPHP49418 695 aa19.62■□□□□ 0.73
CCNL1-217ENST00000476367 LARP1Q6PKG0 1096 aaKnown RBP19.62■□□□□ 0.73
CCNL1-217ENST00000476367 MORC1Q86VD1 984 aa19.62■□□□□ 0.73
CCNL1-217ENST00000476367 USP35Q9P2H5 1018 aa19.62■□□□□ 0.73
CCNL1-217ENST00000476367 PARD3Q8TEW0 1356 aa19.61■□□□□ 0.73
CCNL1-217ENST00000476367 RTL1A6NKG5 1358 aa19.61■□□□□ 0.73
CCNL1-217ENST00000476367 BLMP54132 1417 aaPredicted RBP19.61■□□□□ 0.73
CCNL1-217ENST00000476367 SPATA31A5Q5VU36 1347 aa19.61■□□□□ 0.73
CCNL1-217ENST00000476367 SPATA31A7Q8IWB4 1347 aa19.61■□□□□ 0.73
CCNL1-217ENST00000476367 CDK12Q9NYV4 1490 aaPredicted RBP19.61■□□□□ 0.73
CCNL1-217ENST00000476367 FAM208AQ9UK61 1670 aaKnown RBP19.61■□□□□ 0.73
CCNL1-217ENST00000476367 EMILIN1Q9Y6C2 1016 aa19.61■□□□□ 0.73
CCNL1-217ENST00000476367 WNK3Q9BYP7 1800 aa19.6■□□□□ 0.73
CCNL1-217ENST00000476367 RGPD2P0DJD1 1756 aa19.6■□□□□ 0.73
CCNL1-217ENST00000476367 CRB1P82279 1406 aa19.6■□□□□ 0.73
CCNL1-217ENST00000476367 CSB-PGBD3P0DP91 1061 aa19.6■□□□□ 0.73
CCNL1-217ENST00000476367 HOXC9P31274 260 aa19.6■□□□□ 0.73
CCNL1-217ENST00000476367 WDR17Q8IZU2 1322 aa19.59■□□□□ 0.73
CCNL1-217ENST00000476367 PPM1GO15355 546 aaPredicted RBP19.59■□□□□ 0.73
CCNL1-217ENST00000476367 IP6K1Q92551 441 aa19.59■□□□□ 0.73
CCNL1-217ENST00000476367 FLT4P35916 1363 aa19.59■□□□□ 0.73
CCNL1-217ENST00000476367 BRWD3Q6RI45 1802 aa19.59■□□□□ 0.73
CCNL1-217ENST00000476367 ERBB3P21860 1342 aa19.58■□□□□ 0.73
CCNL1-217ENST00000476367 SPATA31A1Q5TZJ5 1347 aa19.58■□□□□ 0.73
CCNL1-217ENST00000476367 A0A0G2JS52 829 aa19.58■□□□□ 0.73
CCNL1-217ENST00000476367 MYT1Q01538 1121 aa19.58■□□□□ 0.73
CCNL1-217ENST00000476367 TOM1L2Q6ZVM7 507 aa19.58■□□□□ 0.73
CCNL1-217ENST00000476367 ANKRD24Q8TF21 1146 aa19.58■□□□□ 0.72
CCNL1-217ENST00000476367 LTV1Q96GA3 475 aaPredicted RBP19.58■□□□□ 0.72
CCNL1-217ENST00000476367 POLKQ9UBT6 870 aa19.58■□□□□ 0.72
CCNL1-217ENST00000476367 THSD7AQ9UPZ6 1657 aa19.57■□□□□ 0.72
CCNL1-217ENST00000476367 FAM98CQ17RN3 349 aaKnown RBP19.57■□□□□ 0.72
CCNL1-217ENST00000476367 SMG6Q86US8 1419 aaKnown RBP19.57■□□□□ 0.72
CCNL1-217ENST00000476367 PRKRIP1Q9H875 184 aaPredicted RBP19.55■□□□□ 0.72
CCNL1-217ENST00000476367 KIF24Q5T7B8 1368 aa19.55■□□□□ 0.72
CCNL1-217ENST00000476367 HSP90AB2PQ58FF8 381 aa19.54■□□□□ 0.72
CCNL1-217ENST00000476367 NLRP2Q9NX02 1062 aa19.54■□□□□ 0.72
CCNL1-217ENST00000476367 TCP11L2Q8N4U5 519 aa19.53■□□□□ 0.72
CCNL1-217ENST00000476367 INSRP06213 1382 aa19.53■□□□□ 0.72
CCNL1-217ENST00000476367 PPP2R1AP30153 589 aa19.52■□□□□ 0.72
CCNL1-217ENST00000476367 PARP4Q9UKK3 1724 aaKnown RBP19.51■□□□□ 0.71
CCNL1-217ENST00000476367 SEPT12Q8IYM1 358 aa19.51■□□□□ 0.71
CCNL1-217ENST00000476367 LRRC37A3O60309 1634 aa19.51■□□□□ 0.71
CCNL1-217ENST00000476367 CARD10Q9BWT7 1032 aa19.5■□□□□ 0.71
CCNL1-217ENST00000476367 MTHFSP49914 203 aa19.49■□□□□ 0.71
CCNL1-217ENST00000476367 RALBP1Q15311 655 aa19.49■□□□□ 0.71
CCNL1-217ENST00000476367 BARGINQ6ZT62 677 aa19.49■□□□□ 0.71
CCNL1-217ENST00000476367 THRAP3Q9Y2W1 955 aaKnown RBP19.49■□□□□ 0.71
CCNL1-217ENST00000476367 COL3A1P02461 1466 aaPredicted RBP19.49■□□□□ 0.71
CCNL1-217ENST00000476367 ONECUT3O60422 494 aaPredicted RBP19.47■□□□□ 0.71
CCNL1-217ENST00000476367 DIEXFQ68CQ4 756 aaKnown RBP19.47■□□□□ 0.71
CCNL1-217ENST00000476367 DISP2A7MBM2 1401 aa19.46■□□□□ 0.71
CCNL1-217ENST00000476367 EP400Q96L91 3159 aa19.46■□□□□ 0.71
CCNL1-217ENST00000476367 USHBP1Q8N6Y0 703 aa19.46■□□□□ 0.71
CCNL1-217ENST00000476367 CCDC184Q52MB2 194 aa19.44■□□□□ 0.7
CCNL1-217ENST00000476367 NBPF6Q5VWK0 638 aa19.44■□□□□ 0.7
CCNL1-217ENST00000476367 NBPF4Q96M43 638 aa19.44■□□□□ 0.7
CCNL1-217ENST00000476367 RGPD1P0DJD0 1748 aa19.44■□□□□ 0.7
CCNL1-217ENST00000476367 EIF4A2Q14240 407 aaKnown RBP19.43■□□□□ 0.7
CCNL1-217ENST00000476367 MYBBP1AQ9BQG0 1328 aaKnown RBP19.43■□□□□ 0.7
CCNL1-217ENST00000476367 KRT27Q7Z3Y8 459 aa19.43■□□□□ 0.7
CCNL1-217ENST00000476367 MEGF6O75095 1541 aa19.42■□□□□ 0.7
CCNL1-217ENST00000476367 IL2RBP14784 551 aa19.41■□□□□ 0.7
CCNL1-217ENST00000476367 TNS2Q63HR2 1409 aa19.41■□□□□ 0.7
CCNL1-217ENST00000476367 FAM182BQ5T319 152 aa19.4■□□□□ 0.7
CCNL1-217ENST00000476367 CDCA7Q9BWT1 371 aaPredicted RBP19.4■□□□□ 0.7
CCNL1-217ENST00000476367 ANP32CO43423 234 aa19.4■□□□□ 0.7
CCNL1-217ENST00000476367 IL13P35225 146 aa19.4■□□□□ 0.7
CCNL1-217ENST00000476367 DDB1Q16531 1140 aa19.4■□□□□ 0.7
CCNL1-217ENST00000476367 SHANK3Q9BYB0 1731 aa19.39■□□□□ 0.7
CCNL1-217ENST00000476367 PDE3BQ13370 1112 aa19.39■□□□□ 0.69
CCNL1-217ENST00000476367 EYA1Q99502 592 aa19.39■□□□□ 0.69
CCNL1-217ENST00000476367 NCAPD2Q15021 1401 aa19.38■□□□□ 0.69
CCNL1-217ENST00000476367 IGSF1Q8N6C5 1336 aa19.37■□□□□ 0.69
CCNL1-217ENST00000476367 SOCS7O14512 581 aa19.36■□□□□ 0.69
CCNL1-217ENST00000476367 RAPGEF4Q8WZA2 1011 aa19.36■□□□□ 0.69
CCNL1-217ENST00000476367 OVOS2A0A0G2JMS6 1433 aa19.36■□□□□ 0.69
CCNL1-217ENST00000476367 MIER1Q8N108 512 aa19.36■□□□□ 0.69
CCNL1-217ENST00000476367 PKD1L3Q7Z443 1732 aa19.35■□□□□ 0.69
CCNL1-217ENST00000476367 EXOC5O00471 708 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms