RNA–Protein interactions for RNA: ENST00000472822.5

KDM5B-207, Transcript of lysine demethylase 5B, humanhuman

TSL 1 (best)

Gene KDM5B, Length 1,648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-207ENST00000472822 FLT4P35916 1363 aa12.21□□□□□ -0.46
KDM5B-207ENST00000472822 RGPD1P0DJD0 1748 aa12.2□□□□□ -0.46
KDM5B-207ENST00000472822 COL16A1Q07092 1604 aaPredicted RBP12.2□□□□□ -0.46
KDM5B-207ENST00000472822 KIF24Q5T7B8 1368 aa12.2□□□□□ -0.46
KDM5B-207ENST00000472822 U2AF1L5P0DN76 240 aaPredicted RBP12.2□□□□□ -0.46
KDM5B-207ENST00000472822 AMPHP49418 695 aa12.2□□□□□ -0.46
KDM5B-207ENST00000472822 U2AF1Q01081 240 aaKnown RBP eCLIP12.2□□□□□ -0.46
KDM5B-207ENST00000472822 IP6K1Q92551 441 aa12.2□□□□□ -0.46
KDM5B-207ENST00000472822 COL18A1P39060 1754 aa12.2□□□□□ -0.46
KDM5B-207ENST00000472822 ABCA3Q99758 1704 aa12.2□□□□□ -0.46
KDM5B-207ENST00000472822 U2SURPO15042 1029 aaKnown RBP12.19□□□□□ -0.46
KDM5B-207ENST00000472822 ZC3H6P61129 1189 aaKnown RBP12.19□□□□□ -0.46
KDM5B-207ENST00000472822 PLEKHF1Q96S99 279 aa12.19□□□□□ -0.46
KDM5B-207ENST00000472822 AXIN2Q9Y2T1 843 aa12.19□□□□□ -0.46
KDM5B-207ENST00000472822 NUDCQ9Y266 331 aa12.19□□□□□ -0.46
KDM5B-207ENST00000472822 RGPD5Q99666 1765 aa12.18□□□□□ -0.46
KDM5B-207ENST00000472822 RTL1A6NKG5 1358 aa12.18□□□□□ -0.46
KDM5B-207ENST00000472822 PHLPP1O60346 1717 aa12.18□□□□□ -0.46
KDM5B-207ENST00000472822 LRRC59Q96AG4 307 aaKnown RBP12.18□□□□□ -0.46
KDM5B-207ENST00000472822 RSPH6AQ9H0K4 717 aa12.18□□□□□ -0.46
KDM5B-207ENST00000472822 ZBED9Q6R2W3 1325 aa12.17□□□□□ -0.46
KDM5B-207ENST00000472822 APAF1O14727 1248 aa12.17□□□□□ -0.46
KDM5B-207ENST00000472822 HMOX1P09601 288 aa12.17□□□□□ -0.46
KDM5B-207ENST00000472822 AEBP1Q8IUX7 1158 aa12.17□□□□□ -0.46
KDM5B-207ENST00000472822 CPDO75976 1380 aa12.16□□□□□ -0.46
KDM5B-207ENST00000472822 KIAA0232Q92628 1395 aa12.16□□□□□ -0.46
KDM5B-207ENST00000472822 ZBTB7CA1YPR0 619 aa12.16□□□□□ -0.46
KDM5B-207ENST00000472822 RUNDC1Q96C34 613 aa12.16□□□□□ -0.46
KDM5B-207ENST00000472822 EYA1Q99502 592 aa12.16□□□□□ -0.46
KDM5B-207ENST00000472822 COL22A1Q8NFW1 1626 aaPredicted RBP12.16□□□□□ -0.46
KDM5B-207ENST00000472822 RGPD2P0DJD1 1756 aa12.16□□□□□ -0.46
KDM5B-207ENST00000472822 FCHSD2O94868 740 aa12.15□□□□□ -0.46
KDM5B-207ENST00000472822 CHRNA2Q15822 529 aa12.15□□□□□ -0.46
KDM5B-207ENST00000472822 LTV1Q96GA3 475 aaPredicted RBP12.15□□□□□ -0.46
KDM5B-207ENST00000472822 PHACTR3Q96KR7 559 aa12.15□□□□□ -0.46
KDM5B-207ENST00000472822 SALL2Q9Y467 1007 aaPredicted RBP12.15□□□□□ -0.46
KDM5B-207ENST00000472822 IGSF1Q8N6C5 1336 aa12.15□□□□□ -0.46
KDM5B-207ENST00000472822 TCP11L2Q8N4U5 519 aa12.15□□□□□ -0.47
KDM5B-207ENST00000472822 ZNF521Q96K83 1311 aa12.14□□□□□ -0.47
KDM5B-207ENST00000472822 PRKAR2BP31323 418 aa12.14□□□□□ -0.47
KDM5B-207ENST00000472822 NBPF6Q5VWK0 638 aa12.14□□□□□ -0.47
KDM5B-207ENST00000472822 SULT6B1Q6IMI4 303 aa12.14□□□□□ -0.47
KDM5B-207ENST00000472822 NBPF4Q96M43 638 aa12.14□□□□□ -0.47
KDM5B-207ENST00000472822 RRP7AQ9Y3A4 280 aaKnown RBP12.13□□□□□ -0.47
KDM5B-207ENST00000472822 LMO7Q8WWI1 1683 aa12.13□□□□□ -0.47
KDM5B-207ENST00000472822 KDRP35968 1356 aa12.13□□□□□ -0.47
KDM5B-207ENST00000472822 CAMTA1Q9Y6Y1 1673 aa12.12□□□□□ -0.47
KDM5B-207ENST00000472822 FAM83GA6ND36 823 aa12.12□□□□□ -0.47
KDM5B-207ENST00000472822 ANKRD24Q8TF21 1146 aa12.12□□□□□ -0.47
KDM5B-207ENST00000472822 USHBP1Q8N6Y0 703 aa12.11□□□□□ -0.47
KDM5B-207ENST00000472822 ERBB3P21860 1342 aa12.11□□□□□ -0.47
KDM5B-207ENST00000472822 NCAPD2Q15021 1401 aa12.11□□□□□ -0.47
KDM5B-207ENST00000472822 ABCC6O95255 1503 aa12.11□□□□□ -0.47
KDM5B-207ENST00000472822 TMPOP42166 694 aaKnown RBP12.11□□□□□ -0.47
KDM5B-207ENST00000472822 CDCA7LQ96GN5 454 aa12.11□□□□□ -0.47
KDM5B-207ENST00000472822 NEUROD2Q15784 382 aa12.1□□□□□ -0.47
KDM5B-207ENST00000472822 PRDM11Q9NQV5 511 aa12.1□□□□□ -0.47
KDM5B-207ENST00000472822 CENPBP07199 599 aaPredicted RBP12.09□□□□□ -0.47
KDM5B-207ENST00000472822 SPINK5Q9NQ38 1064 aaPredicted RBP12.09□□□□□ -0.47
KDM5B-207ENST00000472822 TRIM35Q9UPQ4 493 aa12.09□□□□□ -0.47
KDM5B-207ENST00000472822 HSPA1LP34931 641 aa12.08□□□□□ -0.48
KDM5B-207ENST00000472822 WWC1Q8IX03 1113 aa12.08□□□□□ -0.48
KDM5B-207ENST00000472822 FAM208AQ9UK61 1670 aaKnown RBP12.08□□□□□ -0.48
KDM5B-207ENST00000472822 HAP1P54257 671 aaPredicted RBP12.08□□□□□ -0.48
KDM5B-207ENST00000472822 NCBP3Q53F19 620 aaKnown RBP12.08□□□□□ -0.48
KDM5B-207ENST00000472822 COL5A2P05997 1499 aaPredicted RBP12.07□□□□□ -0.48
KDM5B-207ENST00000472822 DLG5Q8TDM6 1919 aa12.07□□□□□ -0.48
KDM5B-207ENST00000472822 NFE2L2Q16236 605 aa12.07□□□□□ -0.48
KDM5B-207ENST00000472822 CCDC27Q2M243 656 aa12.07□□□□□ -0.48
KDM5B-207ENST00000472822 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
KDM5B-207ENST00000472822 MAPK8IP3Q9UPT6 1336 aa12.07□□□□□ -0.48
KDM5B-207ENST00000472822 RIPK4P57078 832 aa12.06□□□□□ -0.48
KDM5B-207ENST00000472822 MTHFSDQ2M296 383 aaKnown RBP12.06□□□□□ -0.48
KDM5B-207ENST00000472822 NGEFQ8N5V2 710 aa12.06□□□□□ -0.48
KDM5B-207ENST00000472822 JCADQ9P266 1359 aa12.06□□□□□ -0.48
KDM5B-207ENST00000472822 ADAMTS2O95450 1211 aa12.05□□□□□ -0.48
KDM5B-207ENST00000472822 TRMT2AQ8IZ69 625 aaKnown RBP12.05□□□□□ -0.48
KDM5B-207ENST00000472822 COL14A1Q05707 1796 aaKnown RBP12.05□□□□□ -0.48
KDM5B-207ENST00000472822 NUTM2BA6NNL0 878 aaPredicted RBP12.04□□□□□ -0.48
KDM5B-207ENST00000472822 NUTM2EB1AL46 878 aaPredicted RBP12.04□□□□□ -0.48
KDM5B-207ENST00000472822 SLFN5Q08AF3 891 aa12.04□□□□□ -0.48
KDM5B-207ENST00000472822 LARP1Q6PKG0 1096 aaKnown RBP12.04□□□□□ -0.48
KDM5B-207ENST00000472822 NUTM2AQ8IVF1 878 aaPredicted RBP12.04□□□□□ -0.48
KDM5B-207ENST00000472822 NLRP2Q9NX02 1062 aa12.04□□□□□ -0.48
KDM5B-207ENST00000472822 WDR17Q8IZU2 1322 aa12.04□□□□□ -0.48
KDM5B-207ENST00000472822 PDE3BQ13370 1112 aa12.04□□□□□ -0.48
KDM5B-207ENST00000472822 BTG4Q9NY30 223 aa12.04□□□□□ -0.48
KDM5B-207ENST00000472822 LRP6O75581 1613 aa12.03□□□□□ -0.48
KDM5B-207ENST00000472822 GOLGA2Q08379 1002 aa12.03□□□□□ -0.48
KDM5B-207ENST00000472822 DUSP27Q5VZP5 1158 aa12.03□□□□□ -0.48
KDM5B-207ENST00000472822 THUMPD2Q9BTF0 503 aaKnown RBP12.03□□□□□ -0.48
KDM5B-207ENST00000472822 PLCH1Q4KWH8 1693 aa12.02□□□□□ -0.48
KDM5B-207ENST00000472822 CSB-PGBD3P0DP91 1061 aa12.02□□□□□ -0.49
KDM5B-207ENST00000472822 DCTN1Q14203 1278 aa12.02□□□□□ -0.49
KDM5B-207ENST00000472822 WDR63Q8IWG1 891 aa12.02□□□□□ -0.49
KDM5B-207ENST00000472822 STRN4Q9NRL3 753 aa12.02□□□□□ -0.49
KDM5B-207ENST00000472822 MEGF6O75095 1541 aa12.02□□□□□ -0.49
KDM5B-207ENST00000472822 NRAPQ86VF7 1730 aa12.01□□□□□ -0.49
KDM5B-207ENST00000472822 SLIT2O94813 1529 aa12□□□□□ -0.49
KDM5B-207ENST00000472822 CARD10Q9BWT7 1032 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms