RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 PRDM11Q9NQV5 511 aa21.64■■□□□ 1.05
PCOLCE-205ENST00000472348 SLIT2O94813 1529 aa21.64■■□□□ 1.05
PCOLCE-205ENST00000472348 RGPD5Q99666 1765 aa21.64■■□□□ 1.05
PCOLCE-205ENST00000472348 CCER2I3L3R5 266 aa21.63■■□□□ 1.05
PCOLCE-205ENST00000472348 ADAMTS2O95450 1211 aa21.63■■□□□ 1.05
PCOLCE-205ENST00000472348 HOXC9P31274 260 aa21.63■■□□□ 1.05
PCOLCE-205ENST00000472348 ZC3H6P61129 1189 aaKnown RBP21.63■■□□□ 1.05
PCOLCE-205ENST00000472348 CFAP53Q96M91 514 aa21.63■■□□□ 1.05
PCOLCE-205ENST00000472348 AMPHP49418 695 aa21.62■■□□□ 1.05
PCOLCE-205ENST00000472348 RRS1Q15050 365 aaKnown RBP21.62■■□□□ 1.05
PCOLCE-205ENST00000472348 EMILIN1Q9Y6C2 1016 aa21.62■■□□□ 1.05
PCOLCE-205ENST00000472348 NRAPQ86VF7 1730 aa21.62■■□□□ 1.05
PCOLCE-205ENST00000472348 COL3A1P02461 1466 aaPredicted RBP21.62■■□□□ 1.05
PCOLCE-205ENST00000472348 CAMTA1Q9Y6Y1 1673 aa21.61■■□□□ 1.05
PCOLCE-205ENST00000472348 TNNT2P45379 298 aaPredicted RBP21.61■■□□□ 1.05
PCOLCE-205ENST00000472348 FNBP4Q8N3X1 1017 aaPredicted RBP21.61■■□□□ 1.05
PCOLCE-205ENST00000472348 C8orf37Q96NL8 207 aa21.61■■□□□ 1.05
PCOLCE-205ENST00000472348 FAM83GA6ND36 823 aa21.6■■□□□ 1.05
PCOLCE-205ENST00000472348 AFF2P51816 1311 aa21.59■■□□□ 1.05
PCOLCE-205ENST00000472348 PLEKHG5O94827 1062 aa21.59■■□□□ 1.05
PCOLCE-205ENST00000472348 PLEKHG2Q9H7P9 1386 aa21.59■■□□□ 1.05
PCOLCE-205ENST00000472348 COL5A2P05997 1499 aaPredicted RBP21.58■■□□□ 1.05
PCOLCE-205ENST00000472348 SOX12O15370 315 aa21.58■■□□□ 1.05
PCOLCE-205ENST00000472348 FBLN1P23142 703 aa21.58■■□□□ 1.05
PCOLCE-205ENST00000472348 RGPD1P0DJD0 1748 aa21.58■■□□□ 1.04
PCOLCE-205ENST00000472348 ERBB3P21860 1342 aa21.57■■□□□ 1.04
PCOLCE-205ENST00000472348 SOCS7O14512 581 aa21.57■■□□□ 1.04
PCOLCE-205ENST00000472348 NCAPD2Q15021 1401 aa21.56■■□□□ 1.04
PCOLCE-205ENST00000472348 ZNF772Q68DY9 489 aaPredicted RBP21.56■■□□□ 1.04
PCOLCE-205ENST00000472348 HSP90AB2PQ58FF8 381 aa21.55■■□□□ 1.04
PCOLCE-205ENST00000472348 AXIN2Q9Y2T1 843 aa21.55■■□□□ 1.04
PCOLCE-205ENST00000472348 WDR17Q8IZU2 1322 aa21.55■■□□□ 1.04
PCOLCE-205ENST00000472348 DIAPH1O60610 1272 aaKnown RBP21.54■■□□□ 1.04
PCOLCE-205ENST00000472348 NGLY1Q96IV0 654 aa21.54■■□□□ 1.04
PCOLCE-205ENST00000472348 IL13P35225 146 aa21.53■■□□□ 1.04
PCOLCE-205ENST00000472348 CNGB1Q14028 1251 aaPredicted RBP21.53■■□□□ 1.04
PCOLCE-205ENST00000472348 NUDCQ9Y266 331 aa21.53■■□□□ 1.04
PCOLCE-205ENST00000472348 BCL9LQ86UU0 1499 aa21.52■■□□□ 1.04
PCOLCE-205ENST00000472348 PPM1GO15355 546 aaPredicted RBP21.52■■□□□ 1.04
PCOLCE-205ENST00000472348 CHRNA2Q15822 529 aa21.52■■□□□ 1.04
PCOLCE-205ENST00000472348 BTG4Q9NY30 223 aa21.52■■□□□ 1.04
PCOLCE-205ENST00000472348 EIF4A2Q14240 407 aaKnown RBP21.51■■□□□ 1.03
PCOLCE-205ENST00000472348 UNC5CLQ8IV45 518 aa21.51■■□□□ 1.03
PCOLCE-205ENST00000472348 ANKRD24Q8TF21 1146 aa21.51■■□□□ 1.03
PCOLCE-205ENST00000472348 CRB1P82279 1406 aa21.51■■□□□ 1.03
PCOLCE-205ENST00000472348 MIER1Q8N108 512 aa21.5■■□□□ 1.03
PCOLCE-205ENST00000472348 IGSF1Q8N6C5 1336 aa21.5■■□□□ 1.03
PCOLCE-205ENST00000472348 KDRP35968 1356 aa21.49■■□□□ 1.03
PCOLCE-205ENST00000472348 RGPD2P0DJD1 1756 aa21.48■■□□□ 1.03
PCOLCE-205ENST00000472348 CARD10Q9BWT7 1032 aa21.48■■□□□ 1.03
PCOLCE-205ENST00000472348 THRAP3Q9Y2W1 955 aaKnown RBP21.48■■□□□ 1.03
PCOLCE-205ENST00000472348 EVA1CP58658 441 aa21.47■■□□□ 1.03
PCOLCE-205ENST00000472348 VPS72Q15906 364 aa21.47■■□□□ 1.03
PCOLCE-205ENST00000472348 MRS2Q9HD23 443 aa21.47■■□□□ 1.03
PCOLCE-205ENST00000472348 ZBTB7CA1YPR0 619 aa21.46■■□□□ 1.03
PCOLCE-205ENST00000472348 USP21Q9UK80 565 aa21.46■■□□□ 1.03
PCOLCE-205ENST00000472348 WNK3Q9BYP7 1800 aa21.45■■□□□ 1.03
PCOLCE-205ENST00000472348 PNISRQ8TF01 805 aaKnown RBP21.45■■□□□ 1.02
PCOLCE-205ENST00000472348 PNNQ9H307 717 aaKnown RBP21.45■■□□□ 1.02
PCOLCE-205ENST00000472348 QTRT2Q9H974 415 aaKnown RBP21.45■■□□□ 1.02
PCOLCE-205ENST00000472348 ATRNO75882 1429 aa21.45■■□□□ 1.02
PCOLCE-205ENST00000472348 RXRBP28702 533 aa21.44■■□□□ 1.02
PCOLCE-205ENST00000472348 EYA1Q99502 592 aa21.44■■□□□ 1.02
PCOLCE-205ENST00000472348 FCHSD2O94868 740 aa21.43■■□□□ 1.02
PCOLCE-205ENST00000472348 CDCA7Q9BWT1 371 aaPredicted RBP21.43■■□□□ 1.02
PCOLCE-205ENST00000472348 TRPC5Q9UL62 973 aaPredicted RBP21.43■■□□□ 1.02
PCOLCE-205ENST00000472348 CSB-PGBD3P0DP91 1061 aa21.42■■□□□ 1.02
PCOLCE-205ENST00000472348 SPATA31A1Q5TZJ5 1347 aa21.42■■□□□ 1.02
PCOLCE-205ENST00000472348 SPATA31A5Q5VU36 1347 aa21.42■■□□□ 1.02
PCOLCE-205ENST00000472348 NBPF6Q5VWK0 638 aa21.42■■□□□ 1.02
PCOLCE-205ENST00000472348 SPATA31A7Q8IWB4 1347 aa21.42■■□□□ 1.02
PCOLCE-205ENST00000472348 NBPF4Q96M43 638 aa21.42■■□□□ 1.02
PCOLCE-205ENST00000472348 PARP4Q9UKK3 1724 aaKnown RBP21.42■■□□□ 1.02
PCOLCE-205ENST00000472348 BARGINQ6ZT62 677 aa21.41■■□□□ 1.02
PCOLCE-205ENST00000472348 TOM1L2Q6ZVM7 507 aa21.41■■□□□ 1.02
PCOLCE-205ENST00000472348 WDR43Q15061 677 aaKnown RBP eCLIP21.4■■□□□ 1.02
PCOLCE-205ENST00000472348 CCDC184Q52MB2 194 aa21.4■■□□□ 1.02
PCOLCE-205ENST00000472348 LARP1Q6PKG0 1096 aaKnown RBP21.4■■□□□ 1.02
PCOLCE-205ENST00000472348 STRN4Q9NRL3 753 aa21.39■■□□□ 1.01
PCOLCE-205ENST00000472348 RBM6P78332 1123 aaKnown RBP21.38■■□□□ 1.01
PCOLCE-205ENST00000472348 TCP11L2Q8N4U5 519 aa21.38■■□□□ 1.01
PCOLCE-205ENST00000472348 LTV1Q96GA3 475 aaPredicted RBP21.38■■□□□ 1.01
PCOLCE-205ENST00000472348 NLRP2Q9NX02 1062 aa21.38■■□□□ 1.01
PCOLCE-205ENST00000472348 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.38■■□□□ 1.01
PCOLCE-205ENST00000472348 PKD1L3Q7Z443 1732 aa21.38■■□□□ 1.01
PCOLCE-205ENST00000472348 DISP2A7MBM2 1401 aa21.38■■□□□ 1.01
PCOLCE-205ENST00000472348 ONECUT3O60422 494 aaPredicted RBP21.37■■□□□ 1.01
PCOLCE-205ENST00000472348 U2AF1L5P0DN76 240 aaPredicted RBP21.37■■□□□ 1.01
PCOLCE-205ENST00000472348 U2AF1Q01081 240 aaKnown RBP eCLIP21.37■■□□□ 1.01
PCOLCE-205ENST00000472348 GLI3P10071 1580 aa21.36■■□□□ 1.01
PCOLCE-205ENST00000472348 U2SURPO15042 1029 aaKnown RBP21.36■■□□□ 1.01
PCOLCE-205ENST00000472348 NCBP3Q53F19 620 aaKnown RBP21.36■■□□□ 1.01
PCOLCE-205ENST00000472348 GJD4Q96KN9 370 aaPredicted RBP21.36■■□□□ 1.01
PCOLCE-205ENST00000472348 RSPH6AQ9H0K4 717 aa21.36■■□□□ 1.01
PCOLCE-205ENST00000472348 RGS12O14924 1447 aa21.36■■□□□ 1.01
PCOLCE-205ENST00000472348 THSD7AQ9UPZ6 1657 aa21.35■■□□□ 1.01
PCOLCE-205ENST00000472348 SULT6B1Q6IMI4 303 aa21.35■■□□□ 1.01
PCOLCE-205ENST00000472348 ADAMTS8Q9UP79 889 aa21.34■■□□□ 1.01
PCOLCE-205ENST00000472348 OVOS2A0A0G2JMS6 1433 aa21.33■■□□□ 1.01
PCOLCE-205ENST00000472348 IL2RBP14784 551 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms