RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 RBM6P78332 1123 aaKnown RBP27.26■■□□□ 1.95
HDAC7-220ENST00000471235 ARHGEF25Q86VW2 580 aa27.26■■□□□ 1.95
HDAC7-220ENST00000471235 VPS72Q15906 364 aa27.25■■□□□ 1.95
HDAC7-220ENST00000471235 PEAK1Q9H792 1746 aa27.24■■□□□ 1.95
HDAC7-220ENST00000471235 CGNL1Q0VF96 1302 aa27.23■■□□□ 1.95
HDAC7-220ENST00000471235 FAM208AQ9UK61 1670 aaKnown RBP27.23■■□□□ 1.95
HDAC7-220ENST00000471235 GJD4Q96KN9 370 aaPredicted RBP27.22■■□□□ 1.95
HDAC7-220ENST00000471235 THSD7AQ9UPZ6 1657 aa27.21■■□□□ 1.95
HDAC7-220ENST00000471235 STRN4Q9NRL3 753 aa27.2■■□□□ 1.94
HDAC7-220ENST00000471235 RGPD2P0DJD1 1756 aa27.19■■□□□ 1.94
HDAC7-220ENST00000471235 CCDC9Q9Y3X0 531 aaKnown RBP27.18■■□□□ 1.94
HDAC7-220ENST00000471235 SPATA31A5Q5VU36 1347 aa27.17■■□□□ 1.94
HDAC7-220ENST00000471235 SPATA31A7Q8IWB4 1347 aa27.17■■□□□ 1.94
HDAC7-220ENST00000471235 AXIN2Q9Y2T1 843 aa27.17■■□□□ 1.94
HDAC7-220ENST00000471235 NSD2O96028 1365 aa27.17■■□□□ 1.94
HDAC7-220ENST00000471235 MAP3K19Q56UN5 1328 aa27.15■■□□□ 1.94
HDAC7-220ENST00000471235 FBLN1P23142 703 aa27.14■■□□□ 1.94
HDAC7-220ENST00000471235 EVA1CP58658 441 aa27.14■■□□□ 1.94
HDAC7-220ENST00000471235 LARP1Q6PKG0 1096 aaKnown RBP27.14■■□□□ 1.94
HDAC7-220ENST00000471235 BLMP54132 1417 aaPredicted RBP27.14■■□□□ 1.93
HDAC7-220ENST00000471235 CRB1P82279 1406 aa27.14■■□□□ 1.93
HDAC7-220ENST00000471235 SPATA31A1Q5TZJ5 1347 aa27.14■■□□□ 1.93
HDAC7-220ENST00000471235 PARP4Q9UKK3 1724 aaKnown RBP27.13■■□□□ 1.93
HDAC7-220ENST00000471235 RTL1A6NKG5 1358 aa27.13■■□□□ 1.93
HDAC7-220ENST00000471235 KNSTRNQ9Y448 316 aa27.12■■□□□ 1.93
HDAC7-220ENST00000471235 WDR17Q8IZU2 1322 aa27.11■■□□□ 1.93
HDAC7-220ENST00000471235 RRS1Q15050 365 aaKnown RBP27.1■■□□□ 1.93
HDAC7-220ENST00000471235 LRRC37A3O60309 1634 aa27.08■■□□□ 1.93
HDAC7-220ENST00000471235 PER1O15534 1290 aaPredicted RBP27.08■■□□□ 1.93
HDAC7-220ENST00000471235 AMER1Q5JTC6 1135 aaPredicted RBP27.08■■□□□ 1.93
HDAC7-220ENST00000471235 IP6K1Q92551 441 aa27.08■■□□□ 1.93
HDAC7-220ENST00000471235 ERBB3P21860 1342 aa27.08■■□□□ 1.93
HDAC7-220ENST00000471235 FAM98CQ17RN3 349 aaKnown RBP27.07■■□□□ 1.92
HDAC7-220ENST00000471235 HOXC9P31274 260 aa27.06■■□□□ 1.92
HDAC7-220ENST00000471235 ONECUT3O60422 494 aaPredicted RBP27.05■■□□□ 1.92
HDAC7-220ENST00000471235 AMPHP49418 695 aa27.05■■□□□ 1.92
HDAC7-220ENST00000471235 USP35Q9P2H5 1018 aa27.05■■□□□ 1.92
HDAC7-220ENST00000471235 KIF24Q5T7B8 1368 aa27.05■■□□□ 1.92
HDAC7-220ENST00000471235 TOM1L2Q6ZVM7 507 aa27.04■■□□□ 1.92
HDAC7-220ENST00000471235 FLT4P35916 1363 aa27.04■■□□□ 1.92
HDAC7-220ENST00000471235 CSB-PGBD3P0DP91 1061 aa27.03■■□□□ 1.92
HDAC7-220ENST00000471235 SMG6Q86US8 1419 aaKnown RBP27.03■■□□□ 1.92
HDAC7-220ENST00000471235 SEPT12Q8IYM1 358 aa27.03■■□□□ 1.92
HDAC7-220ENST00000471235 ANKRD24Q8TF21 1146 aa27.03■■□□□ 1.92
HDAC7-220ENST00000471235 EMILIN1Q9Y6C2 1016 aa27.03■■□□□ 1.92
HDAC7-220ENST00000471235 NPC1L1Q9UHC9 1359 aa27.02■■□□□ 1.92
HDAC7-220ENST00000471235 SOCS7O14512 581 aa27.02■■□□□ 1.92
HDAC7-220ENST00000471235 TCP11L2Q8N4U5 519 aa27.02■■□□□ 1.92
HDAC7-220ENST00000471235 TNNT2P45379 298 aaPredicted RBP27.01■■□□□ 1.91
HDAC7-220ENST00000471235 BARGINQ6ZT62 677 aa27.01■■□□□ 1.91
HDAC7-220ENST00000471235 INSRP06213 1382 aa27■■□□□ 1.91
HDAC7-220ENST00000471235 A0A0G2JS52 829 aa27■■□□□ 1.91
HDAC7-220ENST00000471235 MYT1Q01538 1121 aa27■■□□□ 1.91
HDAC7-220ENST00000471235 MORC1Q86VD1 984 aa27■■□□□ 1.91
HDAC7-220ENST00000471235 THRAP3Q9Y2W1 955 aaKnown RBP27■■□□□ 1.91
HDAC7-220ENST00000471235 CARD10Q9BWT7 1032 aa26.99■■□□□ 1.91
HDAC7-220ENST00000471235 DISP2A7MBM2 1401 aa26.99■■□□□ 1.91
HDAC7-220ENST00000471235 LTV1Q96GA3 475 aaPredicted RBP26.98■■□□□ 1.91
HDAC7-220ENST00000471235 POLKQ9UBT6 870 aa26.98■■□□□ 1.91
HDAC7-220ENST00000471235 CC2D1BQ5T0F9 858 aaKnown RBP26.97■■□□□ 1.91
HDAC7-220ENST00000471235 HSP90AB2PQ58FF8 381 aa26.95■■□□□ 1.9
HDAC7-220ENST00000471235 NLRP2Q9NX02 1062 aa26.95■■□□□ 1.9
HDAC7-220ENST00000471235 SHANK3Q9BYB0 1731 aa26.94■■□□□ 1.9
HDAC7-220ENST00000471235 PPM1GO15355 546 aaPredicted RBP26.93■■□□□ 1.9
HDAC7-220ENST00000471235 SBF2Q86WG5 1849 aa26.91■■□□□ 1.9
HDAC7-220ENST00000471235 KRT27Q7Z3Y8 459 aa26.91■■□□□ 1.9
HDAC7-220ENST00000471235 EP400Q96L91 3159 aa26.91■■□□□ 1.9
HDAC7-220ENST00000471235 RGPD1P0DJD0 1748 aa26.9■■□□□ 1.9
HDAC7-220ENST00000471235 CNGB1Q14028 1251 aaPredicted RBP26.89■■□□□ 1.9
HDAC7-220ENST00000471235 TNS1Q9HBL0 1735 aaKnown RBP26.89■■□□□ 1.9
HDAC7-220ENST00000471235 TNS2Q63HR2 1409 aa26.89■■□□□ 1.89
HDAC7-220ENST00000471235 NCAPD2Q15021 1401 aa26.88■■□□□ 1.89
HDAC7-220ENST00000471235 CDCA7Q9BWT1 371 aaPredicted RBP26.87■■□□□ 1.89
HDAC7-220ENST00000471235 PKD1L3Q7Z443 1732 aa26.86■■□□□ 1.89
HDAC7-220ENST00000471235 MEGF6O75095 1541 aa26.85■■□□□ 1.89
HDAC7-220ENST00000471235 NBPF6Q5VWK0 638 aa26.85■■□□□ 1.89
HDAC7-220ENST00000471235 NBPF4Q96M43 638 aa26.85■■□□□ 1.89
HDAC7-220ENST00000471235 DDX10Q13206 875 aaKnown RBP26.84■■□□□ 1.89
HDAC7-220ENST00000471235 USHBP1Q8N6Y0 703 aa26.83■■□□□ 1.89
HDAC7-220ENST00000471235 IL2RBP14784 551 aa26.82■■□□□ 1.88
HDAC7-220ENST00000471235 EIF4A2Q14240 407 aaKnown RBP26.82■■□□□ 1.88
HDAC7-220ENST00000471235 DDB1Q16531 1140 aa26.82■■□□□ 1.88
HDAC7-220ENST00000471235 UPF1Q92900 1129 aaKnown RBP eCLIP26.82■■□□□ 1.88
HDAC7-220ENST00000471235 COL3A1P02461 1466 aaPredicted RBP26.81■■□□□ 1.88
HDAC7-220ENST00000471235 FAM182BQ5T319 152 aa26.81■■□□□ 1.88
HDAC7-220ENST00000471235 PDE3BQ13370 1112 aa26.8■■□□□ 1.88
HDAC7-220ENST00000471235 OVOS2A0A0G2JMS6 1433 aa26.8■■□□□ 1.88
HDAC7-220ENST00000471235 MTHFSP49914 203 aa26.79■■□□□ 1.88
HDAC7-220ENST00000471235 PARD3Q8TEW0 1356 aa26.78■■□□□ 1.88
HDAC7-220ENST00000471235 ZNF316A6NFI3 1004 aaPredicted RBP26.77■■□□□ 1.88
HDAC7-220ENST00000471235 EYA1Q99502 592 aa26.77■■□□□ 1.88
HDAC7-220ENST00000471235 DOT1LQ8TEK3 1739 aa26.76■■□□□ 1.88
HDAC7-220ENST00000471235 NHSQ6T4R5 1651 aa26.76■■□□□ 1.87
HDAC7-220ENST00000471235 IGSF1Q8N6C5 1336 aa26.74■■□□□ 1.87
HDAC7-220ENST00000471235 EXOC5O00471 708 aa26.74■■□□□ 1.87
HDAC7-220ENST00000471235 KAT6BQ8WYB5 2073 aa26.74■■□□□ 1.87
HDAC7-220ENST00000471235 MARCH10Q8NA82 808 aaPredicted RBP26.73■■□□□ 1.87
HDAC7-220ENST00000471235 FAM196AQ6ZSG2 479 aa26.72■■□□□ 1.87
HDAC7-220ENST00000471235 PPP2R1AP30153 589 aa26.71■■□□□ 1.87
HDAC7-220ENST00000471235 IL13P35225 146 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms