RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 STRN4Q9NRL3 753 aa21■□□□□ 0.95
ABCF3-208ENST00000471226 KIF7Q2M1P5 1343 aa21■□□□□ 0.95
ABCF3-208ENST00000471226 EVA1CP58658 441 aa20.99■□□□□ 0.95
ABCF3-208ENST00000471226 AXIN2Q9Y2T1 843 aa20.99■□□□□ 0.95
ABCF3-208ENST00000471226 GGNBP2Q9H3C7 697 aa20.98■□□□□ 0.95
ABCF3-208ENST00000471226 SPATA31A1Q5TZJ5 1347 aa20.98■□□□□ 0.95
ABCF3-208ENST00000471226 LARP1Q6PKG0 1096 aaKnown RBP20.96■□□□□ 0.95
ABCF3-208ENST00000471226 PANK3Q9H999 370 aa20.96■□□□□ 0.95
ABCF3-208ENST00000471226 THSD7AQ9UPZ6 1657 aa20.96■□□□□ 0.95
ABCF3-208ENST00000471226 ANKRD26Q9UPS8 1709 aa20.95■□□□□ 0.94
ABCF3-208ENST00000471226 SEPT12Q8IYM1 358 aa20.94■□□□□ 0.94
ABCF3-208ENST00000471226 FAM98CQ17RN3 349 aaKnown RBP20.93■□□□□ 0.94
ABCF3-208ENST00000471226 CGNL1Q0VF96 1302 aa20.93■□□□□ 0.94
ABCF3-208ENST00000471226 CCDC7Q96M83 1385 aa20.93■□□□□ 0.94
ABCF3-208ENST00000471226 CRB1P82279 1406 aa20.93■□□□□ 0.94
ABCF3-208ENST00000471226 WDR17Q8IZU2 1322 aa20.92■□□□□ 0.94
ABCF3-208ENST00000471226 FBLN1P23142 703 aa20.91■□□□□ 0.94
ABCF3-208ENST00000471226 WASHC2AQ641Q2 1341 aa20.91■□□□□ 0.94
ABCF3-208ENST00000471226 BARGINQ6ZT62 677 aa20.91■□□□□ 0.94
ABCF3-208ENST00000471226 MAP2P11137 1827 aaKnown RBP20.9■□□□□ 0.94
ABCF3-208ENST00000471226 MAP3K19Q56UN5 1328 aa20.9■□□□□ 0.94
ABCF3-208ENST00000471226 IP6K1Q92551 441 aa20.9■□□□□ 0.94
ABCF3-208ENST00000471226 THRAP3Q9Y2W1 955 aaKnown RBP20.9■□□□□ 0.94
ABCF3-208ENST00000471226 WNK3Q9BYP7 1800 aa20.9■□□□□ 0.94
ABCF3-208ENST00000471226 BLMP54132 1417 aaPredicted RBP20.89■□□□□ 0.94
ABCF3-208ENST00000471226 TCP11L2Q8N4U5 519 aa20.89■□□□□ 0.93
ABCF3-208ENST00000471226 USP35Q9P2H5 1018 aa20.89■□□□□ 0.93
ABCF3-208ENST00000471226 TOM1L2Q6ZVM7 507 aa20.88■□□□□ 0.93
ABCF3-208ENST00000471226 PARP4Q9UKK3 1724 aaKnown RBP20.87■□□□□ 0.93
ABCF3-208ENST00000471226 ERBB3P21860 1342 aa20.87■□□□□ 0.93
ABCF3-208ENST00000471226 UPF1Q92900 1129 aaKnown RBP eCLIP20.87■□□□□ 0.93
ABCF3-208ENST00000471226 FAM208AQ9UK61 1670 aaKnown RBP20.86■□□□□ 0.93
ABCF3-208ENST00000471226 HOXC9P31274 260 aa20.86■□□□□ 0.93
ABCF3-208ENST00000471226 RRS1Q15050 365 aaKnown RBP20.86■□□□□ 0.93
ABCF3-208ENST00000471226 CARD10Q9BWT7 1032 aa20.86■□□□□ 0.93
ABCF3-208ENST00000471226 PEAK1Q9H792 1746 aa20.86■□□□□ 0.93
ABCF3-208ENST00000471226 RTL1A6NKG5 1358 aa20.85■□□□□ 0.93
ABCF3-208ENST00000471226 NSD2O96028 1365 aa20.85■□□□□ 0.93
ABCF3-208ENST00000471226 A0A0G2JS52 829 aa20.85■□□□□ 0.93
ABCF3-208ENST00000471226 CSB-PGBD3P0DP91 1061 aa20.85■□□□□ 0.93
ABCF3-208ENST00000471226 MYT1Q01538 1121 aa20.85■□□□□ 0.93
ABCF3-208ENST00000471226 KRT27Q7Z3Y8 459 aa20.85■□□□□ 0.93
ABCF3-208ENST00000471226 AMPHP49418 695 aa20.84■□□□□ 0.93
ABCF3-208ENST00000471226 ANKRD24Q8TF21 1146 aa20.84■□□□□ 0.93
ABCF3-208ENST00000471226 KNSTRNQ9Y448 316 aa20.84■□□□□ 0.93
ABCF3-208ENST00000471226 RGPD2P0DJD1 1756 aa20.84■□□□□ 0.93
ABCF3-208ENST00000471226 KIF24Q5T7B8 1368 aa20.84■□□□□ 0.93
ABCF3-208ENST00000471226 EP400Q96L91 3159 aa20.83■□□□□ 0.93
ABCF3-208ENST00000471226 PER1O15534 1290 aaPredicted RBP20.83■□□□□ 0.93
ABCF3-208ENST00000471226 AMER1Q5JTC6 1135 aaPredicted RBP20.81■□□□□ 0.92
ABCF3-208ENST00000471226 DISP2A7MBM2 1401 aa20.8■□□□□ 0.92
ABCF3-208ENST00000471226 LRRC37A3O60309 1634 aa20.8■□□□□ 0.92
ABCF3-208ENST00000471226 ZEB1P37275 1124 aaPredicted RBP20.8■□□□□ 0.92
ABCF3-208ENST00000471226 FLT4P35916 1363 aa20.8■□□□□ 0.92
ABCF3-208ENST00000471226 CDCA7Q9BWT1 371 aaPredicted RBP20.79■□□□□ 0.92
ABCF3-208ENST00000471226 NLRP2Q9NX02 1062 aa20.79■□□□□ 0.92
ABCF3-208ENST00000471226 EMILIN1Q9Y6C2 1016 aa20.79■□□□□ 0.92
ABCF3-208ENST00000471226 INSRP06213 1382 aa20.78■□□□□ 0.92
ABCF3-208ENST00000471226 POLKQ9UBT6 870 aa20.78■□□□□ 0.92
ABCF3-208ENST00000471226 HSP90AB2PQ58FF8 381 aa20.77■□□□□ 0.92
ABCF3-208ENST00000471226 LTV1Q96GA3 475 aaPredicted RBP20.77■□□□□ 0.92
ABCF3-208ENST00000471226 PDE3BQ13370 1112 aa20.75■□□□□ 0.91
ABCF3-208ENST00000471226 MORC1Q86VD1 984 aa20.75■□□□□ 0.91
ABCF3-208ENST00000471226 NPC1L1Q9UHC9 1359 aa20.74■□□□□ 0.91
ABCF3-208ENST00000471226 TNNT2P45379 298 aaPredicted RBP20.74■□□□□ 0.91
ABCF3-208ENST00000471226 FAM182BQ5T319 152 aa20.74■□□□□ 0.91
ABCF3-208ENST00000471226 CCDC125Q86Z20 511 aa20.74■□□□□ 0.91
ABCF3-208ENST00000471226 SMG6Q86US8 1419 aaKnown RBP20.73■□□□□ 0.91
ABCF3-208ENST00000471226 DDB1Q16531 1140 aa20.73■□□□□ 0.91
ABCF3-208ENST00000471226 SBF2Q86WG5 1849 aa20.71■□□□□ 0.91
ABCF3-208ENST00000471226 RGPD1P0DJD0 1748 aa20.71■□□□□ 0.91
ABCF3-208ENST00000471226 PPM1GO15355 546 aaPredicted RBP20.71■□□□□ 0.91
ABCF3-208ENST00000471226 IL2RBP14784 551 aa20.71■□□□□ 0.91
ABCF3-208ENST00000471226 NBPF6Q5VWK0 638 aa20.71■□□□□ 0.91
ABCF3-208ENST00000471226 FAM196AQ6ZSG2 479 aa20.71■□□□□ 0.91
ABCF3-208ENST00000471226 NBPF4Q96M43 638 aa20.71■□□□□ 0.91
ABCF3-208ENST00000471226 TNS2Q63HR2 1409 aa20.7■□□□□ 0.9
ABCF3-208ENST00000471226 EXOC5O00471 708 aa20.69■□□□□ 0.9
ABCF3-208ENST00000471226 CC2D1BQ5T0F9 858 aaKnown RBP20.69■□□□□ 0.9
ABCF3-208ENST00000471226 TNS1Q9HBL0 1735 aaKnown RBP20.69■□□□□ 0.9
ABCF3-208ENST00000471226 MARCH10Q8NA82 808 aaPredicted RBP20.67■□□□□ 0.9
ABCF3-208ENST00000471226 OVOS2A0A0G2JMS6 1433 aa20.67■□□□□ 0.9
ABCF3-208ENST00000471226 NCAPD2Q15021 1401 aa20.67■□□□□ 0.9
ABCF3-208ENST00000471226 SHANK3Q9BYB0 1731 aa20.66■□□□□ 0.9
ABCF3-208ENST00000471226 BCL9O00512 1426 aa20.65■□□□□ 0.9
ABCF3-208ENST00000471226 USHBP1Q8N6Y0 703 aa20.65■□□□□ 0.9
ABCF3-208ENST00000471226 MEGF6O75095 1541 aa20.64■□□□□ 0.9
ABCF3-208ENST00000471226 EIF4A2Q14240 407 aaKnown RBP20.64■□□□□ 0.89
ABCF3-208ENST00000471226 SF3B2Q13435 895 aaKnown RBP20.63■□□□□ 0.89
ABCF3-208ENST00000471226 EYA1Q99502 592 aa20.63■□□□□ 0.89
ABCF3-208ENST00000471226 TRIM37O94972 964 aa20.62■□□□□ 0.89
ABCF3-208ENST00000471226 KAT6BQ8WYB5 2073 aa20.62■□□□□ 0.89
ABCF3-208ENST00000471226 MTHFSP49914 203 aa20.6■□□□□ 0.89
ABCF3-208ENST00000471226 DEFB132Q7Z7B7 95 aa20.6■□□□□ 0.89
ABCF3-208ENST00000471226 RAPGEF4Q8WZA2 1011 aa20.6■□□□□ 0.89
ABCF3-208ENST00000471226 PKD1L3Q7Z443 1732 aa20.59■□□□□ 0.89
ABCF3-208ENST00000471226 ZCRB1Q8TBF4 217 aaKnown RBP20.59■□□□□ 0.89
ABCF3-208ENST00000471226 IGSF1Q8N6C5 1336 aa20.58■□□□□ 0.89
ABCF3-208ENST00000471226 TATP17735 454 aaPredicted RBP20.58■□□□□ 0.89
ABCF3-208ENST00000471226 BAG6P46379 1132 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms